EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000009416 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 852 bases
Position: chr5:7826804-7827655
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000012286	RRM_1	PF00076.22	7.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000012477	PABPN1L-201	579	-	ENSTNIP00000012286	192 (aa)	-	H3CVK2

Gene Model

Click here to download ENSTNIG00000009416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009416's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009416	PABPN1L	100	94.792	ENSAPOG00000000685	PABPN1L	63	94.792	Acanthochromis_polyacanthus
ENSTNIG00000009416	PABPN1L	100	91.146	ENSACIG00000021400	PABPN1L	82	91.146	Amphilophus_citrinellus
ENSTNIG00000009416	PABPN1L	100	95.312	ENSAOCG00000019844	PABPN1L	73	95.312	Amphiprion_ocellaris
ENSTNIG00000009416	PABPN1L	100	94.792	ENSAPEG00000019534	PABPN1L	73	94.792	Amphiprion_percula
ENSTNIG00000009416	PABPN1L	100	93.229	ENSATEG00000011646	PABPN1L	77	93.229	Anabas_testudineus
ENSTNIG00000009416	PABPN1L	64	64.800	ENSACAG00000013250	PABPN1L	52	71.579	Anolis_carolinensis
ENSTNIG00000009416	PABPN1L	100	91.667	ENSACLG00000025147	PABPN1L	74	91.667	Astatotilapia_calliptera
ENSTNIG00000009416	PABPN1L	53	67.647	ENSBTAG00000006727	-	60	65.306	Bos_taurus
ENSTNIG00000009416	PABPN1L	100	90.104	ENSCSEG00000001142	pabpn1l	74	90.104	Cynoglossus_semilaevis
ENSTNIG00000009416	PABPN1L	100	93.229	ENSCVAG00000015547	PABPN1L	73	93.229	Cyprinodon_variegatus
ENSTNIG00000009416	PABPN1L	99	70.833	ENSELUG00000018385	PABPN1L	73	69.792	Esox_lucius
ENSTNIG00000009416	PABPN1L	100	93.750	ENSFHEG00000018295	PABPN1L	73	93.750	Fundulus_heteroclitus
ENSTNIG00000009416	PABPN1L	100	79.167	ENSGMOG00000001475	PABPN1L	72	80.729	Gadus_morhua
ENSTNIG00000009416	PABPN1L	58	67.568	ENSGALG00000006242	PABPN1L	56	68.367	Gallus_gallus
ENSTNIG00000009416	PABPN1L	100	92.708	ENSGAFG00000012565	PABPN1L	73	92.708	Gambusia_affinis
ENSTNIG00000009416	PABPN1L	100	90.104	ENSGACG00000015428	PABPN1L	72	90.104	Gasterosteus_aculeatus
ENSTNIG00000009416	PABPN1L	100	91.667	ENSHBUG00000002388	PABPN1L	73	91.667	Haplochromis_burtoni
ENSTNIG00000009416	PABPN1L	100	89.062	ENSHCOG00000004151	PABPN1L	71	89.062	Hippocampus_comes
ENSTNIG00000009416	PABPN1L	67	74.219	ENSIPUG00000023583	PABPN1L	51	83.673	Ictalurus_punctatus
ENSTNIG00000009416	PABPN1L	100	92.188	ENSKMAG00000001112	PABPN1L	85	92.188	Kryptolebias_marmoratus
ENSTNIG00000009416	PABPN1L	100	87.629	ENSLBEG00000011647	PABPN1L	71	89.691	Labrus_bergylta
ENSTNIG00000009416	PABPN1L	100	91.667	ENSMZEG00005002186	PABPN1L	74	91.667	Maylandia_zebra
ENSTNIG00000009416	PABPN1L	100	94.301	ENSMMOG00000017714	PABPN1L	84	94.301	Mola_mola
ENSTNIG00000009416	PABPN1L	100	90.104	ENSMALG00000016926	PABPN1L	73	90.104	Monopterus_albus
ENSTNIG00000009416	PABPN1L	100	91.667	ENSNBRG00000017078	PABPN1L	81	91.667	Neolamprologus_brichardi
ENSTNIG00000009416	PABPN1L	100	86.458	ENSORLG00000026560	PABPN1L	74	86.458	Oryzias_latipes
ENSTNIG00000009416	PABPN1L	100	86.458	ENSORLG00020015068	PABPN1L	74	86.458	Oryzias_latipes_hni
ENSTNIG00000009416	PABPN1L	100	86.458	ENSORLG00015000397	PABPN1L	74	86.458	Oryzias_latipes_hsok
ENSTNIG00000009416	PABPN1L	100	85.938	ENSOMEG00000017896	PABPN1L	53	85.938	Oryzias_melastigma
ENSTNIG00000009416	PABPN1L	59	71.681	ENSPSIG00000003404	PABPN1L	52	73.469	Pelodiscus_sinensis
ENSTNIG00000009416	PABPN1L	100	89.583	ENSPMGG00000013927	PABPN1L	86	89.583	Periophthalmus_magnuspinnatus
ENSTNIG00000009416	PABPN1L	69	63.433	ENSPCIG00000007038	-	67	71.134	Phascolarctos_cinereus
ENSTNIG00000009416	PABPN1L	100	92.708	ENSPFOG00000007001	PABPN1L	73	92.708	Poecilia_formosa
ENSTNIG00000009416	PABPN1L	100	92.708	ENSPLAG00000018431	PABPN1L	73	92.708	Poecilia_latipinna
ENSTNIG00000009416	PABPN1L	94	85.326	ENSPMEG00000000169	-	91	85.326	Poecilia_mexicana
ENSTNIG00000009416	PABPN1L	100	92.708	ENSPMEG00000009108	PABPN1L	73	92.708	Poecilia_mexicana
ENSTNIG00000009416	PABPN1L	100	92.708	ENSPREG00000022533	PABPN1L	83	92.708	Poecilia_reticulata
ENSTNIG00000009416	PABPN1L	100	91.667	ENSPNYG00000004803	PABPN1L	74	91.667	Pundamilia_nyererei
ENSTNIG00000009416	PABPN1L	100	89.848	ENSSMAG00000021348	PABPN1L	74	87.310	Scophthalmus_maximus
ENSTNIG00000009416	PABPN1L	100	94.792	ENSSDUG00000006986	PABPN1L	73	94.792	Seriola_dumerili
ENSTNIG00000009416	PABPN1L	100	94.792	ENSSLDG00000021845	PABPN1L	73	94.792	Seriola_lalandi_dorsalis
ENSTNIG00000009416	PABPN1L	100	95.312	ENSSPAG00000017978	PABPN1L	73	95.312	Stegastes_partitus
ENSTNIG00000009416	PABPN1L	100	83.854	ENSTRUG00000024725	PABPN1L	70	83.854	Takifugu_rubripes
ENSTNIG00000009416	PABPN1L	100	92.188	ENSXCOG00000003254	PABPN1L	83	92.188	Xiphophorus_couchianus
ENSTNIG00000009416	PABPN1L	100	92.188	ENSXMAG00000029090	PABPN1L	86	92.188	Xiphophorus_maculatus