EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000009565 (Gene tree)
Gene ID: -
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 26618 bases
Position: chr5:10670050-10696667
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000012438	CPSF_A	PF03178.15	1.5e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000012629	-	3009	-	ENSTNIP00000012438	1002 (aa)	-	H3CW04

Gene Model

Click here to download ENSTNIG00000009565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009565	ddb1	99	84.930	ENSG00000167986	DDB1	88	84.930	Homo_sapiens
ENSTNIG00000009565	ddb1	97	92.520	ENSAPOG00000005036	ddb1	86	91.795	Acanthochromis_polyacanthus
ENSTNIG00000009565	ddb1	99	85.030	ENSAMEG00000016518	DDB1	88	85.030	Ailuropoda_melanoleuca
ENSTNIG00000009565	ddb1	84	92.033	ENSACIG00000020624	ddb1	86	92.033	Amphilophus_citrinellus
ENSTNIG00000009565	ddb1	99	92.615	ENSAOCG00000003066	ddb1	88	92.615	Amphiprion_ocellaris
ENSTNIG00000009565	ddb1	99	92.615	ENSAPEG00000000092	ddb1	88	92.615	Amphiprion_percula
ENSTNIG00000009565	ddb1	93	92.102	ENSATEG00000020571	ddb1	85	92.102	Anabas_testudineus
ENSTNIG00000009565	ddb1	99	84.876	ENSAPLG00000007174	DDB1	88	84.876	Anas_platyrhynchos
ENSTNIG00000009565	ddb1	99	84.631	ENSACAG00000017758	DDB1	88	84.631	Anolis_carolinensis
ENSTNIG00000009565	ddb1	99	84.930	ENSANAG00000021878	DDB1	88	84.930	Aotus_nancymaae
ENSTNIG00000009565	ddb1	99	92.515	ENSACLG00000012401	ddb1	88	92.515	Astatotilapia_calliptera
ENSTNIG00000009565	ddb1	99	84.930	ENSBTAG00000021569	DDB1	82	84.930	Bos_taurus
ENSTNIG00000009565	ddb1	99	36.220	WBGene00010890	ddb-1	87	36.220	Caenorhabditis_elegans
ENSTNIG00000009565	ddb1	99	84.930	ENSCJAG00000019319	DDB1	88	84.930	Callithrix_jacchus
ENSTNIG00000009565	ddb1	99	85.030	ENSCAFG00000016264	DDB1	88	85.030	Canis_familiaris
ENSTNIG00000009565	ddb1	93	84.952	ENSCAFG00020012722	DDB1	86	84.952	Canis_lupus_dingo
ENSTNIG00000009565	ddb1	99	84.930	ENSCHIG00000014969	DDB1	88	84.930	Capra_hircus
ENSTNIG00000009565	ddb1	99	84.631	ENSTSYG00000008027	DDB1	88	84.631	Carlito_syrichta
ENSTNIG00000009565	ddb1	99	85.030	ENSCAPG00000010786	DDB1	89	85.030	Cavia_aperea
ENSTNIG00000009565	ddb1	99	85.030	ENSCPOG00000009956	DDB1	88	85.030	Cavia_porcellus
ENSTNIG00000009565	ddb1	99	84.930	ENSCCAG00000035883	DDB1	88	84.930	Cebus_capucinus
ENSTNIG00000009565	ddb1	99	82.347	ENSCATG00000044495	DDB1	88	82.347	Cercocebus_atys
ENSTNIG00000009565	ddb1	99	85.030	ENSCLAG00000004126	DDB1	88	85.030	Chinchilla_lanigera
ENSTNIG00000009565	ddb1	99	84.930	ENSCSAG00000006392	DDB1	88	84.930	Chlorocebus_sabaeus
ENSTNIG00000009565	ddb1	86	76.038	ENSCHOG00000011377	DDB1	77	76.038	Choloepus_hoffmanni
ENSTNIG00000009565	ddb1	99	85.030	ENSCPBG00000017728	DDB1	88	85.030	Chrysemys_picta_bellii
ENSTNIG00000009565	ddb1	99	57.495	ENSCING00000007437	-	88	57.495	Ciona_intestinalis
ENSTNIG00000009565	ddb1	99	57.087	ENSCSAVG00000004783	-	99	54.634	Ciona_savignyi
ENSTNIG00000009565	ddb1	99	84.930	ENSCANG00000019948	DDB1	88	84.930	Colobus_angolensis_palliatus
ENSTNIG00000009565	ddb1	99	85.030	ENSCGRG00001016599	Ddb1	88	85.030	Cricetulus_griseus_chok1gshd
ENSTNIG00000009565	ddb1	99	85.030	ENSCGRG00000013427	Ddb1	88	85.030	Cricetulus_griseus_crigri
ENSTNIG00000009565	ddb1	92	91.658	ENSCSEG00000012499	ddb1	85	91.082	Cynoglossus_semilaevis
ENSTNIG00000009565	ddb1	93	91.016	ENSCVAG00000019531	ddb1	86	91.016	Cyprinodon_variegatus
ENSTNIG00000009565	ddb1	99	85.757	ENSDARG00000074431	ddb1	88	85.757	Danio_rerio
ENSTNIG00000009565	ddb1	93	84.952	ENSDNOG00000014884	DDB1	85	84.952	Dasypus_novemcinctus
ENSTNIG00000009565	ddb1	81	86.250	ENSDORG00000000127	Ddb1	85	86.250	Dipodomys_ordii
ENSTNIG00000009565	ddb1	99	58.109	FBgn0260962	pic	88	58.052	Drosophila_melanogaster
ENSTNIG00000009565	ddb1	61	88.596	ENSETEG00000001053	-	54	88.596	Echinops_telfairi
ENSTNIG00000009565	ddb1	72	79.752	ENSEBUG00000014593	ddb1	80	79.752	Eptatretus_burgeri
ENSTNIG00000009565	ddb1	99	85.030	ENSEASG00005008184	DDB1	88	85.030	Equus_asinus_asinus
ENSTNIG00000009565	ddb1	99	85.030	ENSECAG00000012136	DDB1	88	85.030	Equus_caballus
ENSTNIG00000009565	ddb1	83	79.530	ENSEEUG00000003194	DDB1	73	79.530	Erinaceus_europaeus
ENSTNIG00000009565	ddb1	99	90.619	ENSELUG00000023868	ddb1	88	90.619	Esox_lucius
ENSTNIG00000009565	ddb1	99	85.030	ENSFCAG00000029716	DDB1	88	85.030	Felis_catus
ENSTNIG00000009565	ddb1	99	84.776	ENSFALG00000011981	DDB1	88	84.776	Ficedula_albicollis
ENSTNIG00000009565	ddb1	99	84.930	ENSFDAG00000005128	DDB1	88	84.930	Fukomys_damarensis
ENSTNIG00000009565	ddb1	92	93.066	ENSFHEG00000022133	ddb1	86	93.066	Fundulus_heteroclitus
ENSTNIG00000009565	ddb1	87	96.269	ENSGMOG00000019386	ddb1	90	96.269	Gadus_morhua
ENSTNIG00000009565	ddb1	99	84.930	ENSGALG00000042333	DDB1	88	84.930	Gallus_gallus
ENSTNIG00000009565	ddb1	93	91.658	ENSGAFG00000013142	ddb1	86	91.658	Gambusia_affinis
ENSTNIG00000009565	ddb1	95	90.556	ENSGACG00000017182	ddb1	87	90.556	Gasterosteus_aculeatus
ENSTNIG00000009565	ddb1	99	85.030	ENSGAGG00000014124	DDB1	92	85.030	Gopherus_agassizii
ENSTNIG00000009565	ddb1	99	84.930	ENSGGOG00000004052	DDB1	88	84.930	Gorilla_gorilla
ENSTNIG00000009565	ddb1	99	92.515	ENSHBUG00000008873	ddb1	92	92.515	Haplochromis_burtoni
ENSTNIG00000009565	ddb1	99	85.030	ENSHGLG00000018430	DDB1	88	85.030	Heterocephalus_glaber_female
ENSTNIG00000009565	ddb1	99	84.915	ENSHGLG00100014475	DDB1	88	84.915	Heterocephalus_glaber_male
ENSTNIG00000009565	ddb1	94	91.045	ENSHCOG00000018670	ddb1	86	91.045	Hippocampus_comes
ENSTNIG00000009565	ddb1	99	89.920	ENSIPUG00000005612	DDB1	88	89.920	Ictalurus_punctatus
ENSTNIG00000009565	ddb1	99	84.930	ENSSTOG00000007552	DDB1	88	84.930	Ictidomys_tridecemlineatus
ENSTNIG00000009565	ddb1	99	84.830	ENSJJAG00000017769	Ddb1	88	84.830	Jaculus_jaculus
ENSTNIG00000009565	ddb1	93	91.337	ENSKMAG00000002315	ddb1	87	91.337	Kryptolebias_marmoratus
ENSTNIG00000009565	ddb1	84	91.795	ENSLBEG00000017065	ddb1	87	91.795	Labrus_bergylta
ENSTNIG00000009565	ddb1	99	84.861	ENSLACG00000017611	DDB1	88	84.861	Latimeria_chalumnae
ENSTNIG00000009565	ddb1	92	81.769	ENSLOCG00000000012	ddb1	89	81.769	Lepisosteus_oculatus
ENSTNIG00000009565	ddb1	99	84.830	ENSLAFG00000011513	DDB1	88	84.830	Loxodonta_africana
ENSTNIG00000009565	ddb1	99	84.930	ENSMFAG00000042035	DDB1	88	84.930	Macaca_fascicularis
ENSTNIG00000009565	ddb1	99	84.894	ENSMMUG00000002691	DDB1	88	84.894	Macaca_mulatta
ENSTNIG00000009565	ddb1	99	84.930	ENSMNEG00000031559	DDB1	88	84.930	Macaca_nemestrina
ENSTNIG00000009565	ddb1	99	84.930	ENSMLEG00000044136	DDB1	88	84.930	Mandrillus_leucophaeus
ENSTNIG00000009565	ddb1	99	92.814	ENSMAMG00000014372	ddb1	88	92.814	Mastacembelus_armatus
ENSTNIG00000009565	ddb1	99	92.415	ENSMZEG00005013835	ddb1	88	92.415	Maylandia_zebra
ENSTNIG00000009565	ddb1	99	84.677	ENSMGAG00000004990	DDB1	93	84.677	Meleagris_gallopavo
ENSTNIG00000009565	ddb1	99	85.030	ENSMAUG00000012926	Ddb1	88	85.030	Mesocricetus_auratus
ENSTNIG00000009565	ddb1	99	85.130	ENSMICG00000013703	DDB1	88	85.130	Microcebus_murinus
ENSTNIG00000009565	ddb1	99	85.030	ENSMOCG00000020499	Ddb1	88	85.030	Microtus_ochrogaster
ENSTNIG00000009565	ddb1	84	91.795	ENSMMOG00000001758	ddb1	86	91.795	Mola_mola
ENSTNIG00000009565	ddb1	96	83.848	ENSMODG00000020353	DDB1	84	83.848	Monodelphis_domestica
ENSTNIG00000009565	ddb1	99	92.615	ENSMALG00000014071	ddb1	88	92.615	Monopterus_albus
ENSTNIG00000009565	ddb1	99	85.030	MGP_CAROLIEiJ_G0022695	Ddb1	88	85.030	Mus_caroli
ENSTNIG00000009565	ddb1	99	85.030	ENSMUSG00000024740	Ddb1	88	85.030	Mus_musculus
ENSTNIG00000009565	ddb1	99	85.030	MGP_PahariEiJ_G0014189	Ddb1	88	85.030	Mus_pahari
ENSTNIG00000009565	ddb1	99	85.130	MGP_SPRETEiJ_G0023609	Ddb1	88	85.130	Mus_spretus
ENSTNIG00000009565	ddb1	99	81.537	ENSMPUG00000014200	DDB1	87	81.537	Mustela_putorius_furo
ENSTNIG00000009565	ddb1	99	85.130	ENSMLUG00000013232	DDB1	88	85.130	Myotis_lucifugus
ENSTNIG00000009565	ddb1	99	84.930	ENSNGAG00000009384	Ddb1	88	84.930	Nannospalax_galili
ENSTNIG00000009565	ddb1	99	92.615	ENSNBRG00000019581	ddb1	88	92.615	Neolamprologus_brichardi
ENSTNIG00000009565	ddb1	99	81.755	ENSNLEG00000002022	DDB1	88	81.755	Nomascus_leucogenys
ENSTNIG00000009565	ddb1	90	85.990	ENSMEUG00000001099	DDB1	82	86.142	Notamacropus_eugenii
ENSTNIG00000009565	ddb1	94	85.149	ENSOPRG00000008254	DDB1	83	85.149	Ochotona_princeps
ENSTNIG00000009565	ddb1	99	85.030	ENSODEG00000002419	DDB1	88	85.030	Octodon_degus
ENSTNIG00000009565	ddb1	99	92.615	ENSONIG00000005804	ddb1	88	92.615	Oreochromis_niloticus
ENSTNIG00000009565	ddb1	99	85.230	ENSOANG00000004897	DDB1	97	85.230	Ornithorhynchus_anatinus
ENSTNIG00000009565	ddb1	99	85.130	ENSOCUG00000001667	DDB1	88	85.130	Oryctolagus_cuniculus
ENSTNIG00000009565	ddb1	95	89.927	ENSORLG00000001399	ddb1	87	89.927	Oryzias_latipes
ENSTNIG00000009565	ddb1	95	89.822	ENSORLG00020001277	ddb1	88	89.822	Oryzias_latipes_hni
ENSTNIG00000009565	ddb1	93	91.142	ENSORLG00015002080	ddb1	89	91.142	Oryzias_latipes_hsok
ENSTNIG00000009565	ddb1	96	89.572	ENSOMEG00000006181	ddb1	87	89.572	Oryzias_melastigma
ENSTNIG00000009565	ddb1	99	85.130	ENSOGAG00000016103	DDB1	88	85.130	Otolemur_garnettii
ENSTNIG00000009565	ddb1	98	85.076	ENSOARG00000011716	DDB1	85	85.076	Ovis_aries
ENSTNIG00000009565	ddb1	99	84.930	ENSPPAG00000035343	DDB1	88	84.930	Pan_paniscus
ENSTNIG00000009565	ddb1	99	85.030	ENSPPRG00000013300	DDB1	88	85.030	Panthera_pardus
ENSTNIG00000009565	ddb1	99	85.030	ENSPTIG00000006909	DDB1	88	85.030	Panthera_tigris_altaica
ENSTNIG00000009565	ddb1	99	84.930	ENSPTRG00000003737	DDB1	88	84.930	Pan_troglodytes
ENSTNIG00000009565	ddb1	99	84.930	ENSPANG00000000242	DDB1	88	84.930	Papio_anubis
ENSTNIG00000009565	ddb1	93	89.519	ENSPKIG00000019213	ddb1	82	89.519	Paramormyrops_kingsleyae
ENSTNIG00000009565	ddb1	99	84.861	ENSPSIG00000013275	DDB1	89	84.861	Pelodiscus_sinensis
ENSTNIG00000009565	ddb1	84	91.795	ENSPMGG00000021179	ddb1	86	91.795	Periophthalmus_magnuspinnatus
ENSTNIG00000009565	ddb1	99	85.030	ENSPEMG00000012241	Ddb1	88	85.030	Peromyscus_maniculatus_bairdii
ENSTNIG00000009565	ddb1	90	80.178	ENSPMAG00000008479	ddb1	88	80.178	Petromyzon_marinus
ENSTNIG00000009565	ddb1	99	85.230	ENSPCIG00000002643	DDB1	88	85.230	Phascolarctos_cinereus
ENSTNIG00000009565	ddb1	99	92.124	ENSPFOG00000002768	ddb1	88	92.124	Poecilia_formosa
ENSTNIG00000009565	ddb1	99	91.916	ENSPLAG00000017227	ddb1	88	91.916	Poecilia_latipinna
ENSTNIG00000009565	ddb1	99	91.916	ENSPMEG00000011398	ddb1	88	91.916	Poecilia_mexicana
ENSTNIG00000009565	ddb1	93	91.676	ENSPREG00000004440	ddb1	85	91.676	Poecilia_reticulata
ENSTNIG00000009565	ddb1	99	80.456	ENSPPYG00000003193	DDB1	88	80.456	Pongo_abelii
ENSTNIG00000009565	ddb1	89	81.994	ENSPCAG00000011040	DDB1	79	81.994	Procavia_capensis
ENSTNIG00000009565	ddb1	99	83.865	ENSPCOG00000015176	DDB1	88	83.865	Propithecus_coquereli
ENSTNIG00000009565	ddb1	99	84.830	ENSPVAG00000003847	DDB1	88	84.830	Pteropus_vampyrus
ENSTNIG00000009565	ddb1	56	87.943	ENSPNYG00000010482	ddb1	100	87.943	Pundamilia_nyererei
ENSTNIG00000009565	ddb1	93	89.840	ENSPNAG00000006635	ddb1	84	89.840	Pygocentrus_nattereri
ENSTNIG00000009565	ddb1	99	85.130	ENSRNOG00000020715	Ddb1	88	85.130	Rattus_norvegicus
ENSTNIG00000009565	ddb1	99	84.930	ENSRBIG00000033611	DDB1	88	84.930	Rhinopithecus_bieti
ENSTNIG00000009565	ddb1	99	84.930	ENSRROG00000041407	DDB1	88	84.930	Rhinopithecus_roxellana
ENSTNIG00000009565	ddb1	99	85.030	ENSSBOG00000019775	DDB1	88	85.030	Saimiri_boliviensis_boliviensis
ENSTNIG00000009565	ddb1	99	82.934	ENSSHAG00000011600	DDB1	93	82.934	Sarcophilus_harrisii
ENSTNIG00000009565	ddb1	94	89.446	ENSSFOG00015011151	ddb1	84	89.446	Scleropages_formosus
ENSTNIG00000009565	ddb1	99	92.914	ENSSMAG00000009495	ddb1	88	92.914	Scophthalmus_maximus
ENSTNIG00000009565	ddb1	99	93.114	ENSSDUG00000004642	ddb1	88	93.114	Seriola_dumerili
ENSTNIG00000009565	ddb1	99	93.114	ENSSLDG00000015804	ddb1	88	93.114	Seriola_lalandi_dorsalis
ENSTNIG00000009565	ddb1	66	94.340	ENSSARG00000003290	-	59	94.340	Sorex_araneus
ENSTNIG00000009565	ddb1	99	84.731	ENSSPUG00000019338	DDB1	88	84.731	Sphenodon_punctatus
ENSTNIG00000009565	ddb1	93	92.102	ENSSPAG00000009888	ddb1	86	92.102	Stegastes_partitus
ENSTNIG00000009565	ddb1	99	84.032	ENSSSCG00000013094	DDB1	88	84.032	Sus_scrofa
ENSTNIG00000009565	ddb1	99	84.531	ENSTGUG00000006414	DDB1	88	84.531	Taeniopygia_guttata
ENSTNIG00000009565	ddb1	93	92.193	ENSTRUG00000016682	ddb1	86	92.193	Takifugu_rubripes
ENSTNIG00000009565	ddb1	93	79.297	ENSTTRG00000011055	DDB1	83	79.297	Tursiops_truncatus
ENSTNIG00000009565	ddb1	93	84.952	ENSUAMG00000017793	DDB1	81	84.952	Ursus_americanus
ENSTNIG00000009565	ddb1	93	84.952	ENSUMAG00000011788	DDB1	85	84.952	Ursus_maritimus
ENSTNIG00000009565	ddb1	90	85.294	ENSVPAG00000007963	DDB1	81	85.294	Vicugna_pacos
ENSTNIG00000009565	ddb1	99	85.030	ENSVVUG00000004987	DDB1	90	85.312	Vulpes_vulpes
ENSTNIG00000009565	ddb1	99	82.505	ENSXETG00000008820	ddb1	88	82.505	Xenopus_tropicalis
ENSTNIG00000009565	ddb1	84	91.201	ENSXCOG00000013956	ddb1	86	91.201	Xiphophorus_couchianus
ENSTNIG00000009565	ddb1	93	91.551	ENSXMAG00000000022	ddb1	86	91.551	Xiphophorus_maculatus