EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000009725 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein Ub
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 6314 bases
Position: chr14:9150591-9156904
Accession: ZDB-GENE-030131-6422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000004635	SAP	PF02037.27	7.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000012797	-	1803	-	ENSTNIP00000012606	600 (aa)	-	H3CWH2
ENSTNIT00000004778	-	2274	-	ENSTNIP00000004635	757 (aa)	-	H3C8R3

Gene Model

Click here to download ENSTNIG00000009725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009725's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000009725	hnrnpub	74	31.017	ENSTNIG00000000741	si:ch211-107m4.1	99	30.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009725	hnrnpub	90	68.085	ENSG00000153187	HNRNPU	99	63.667	Homo_sapiens
ENSTNIG00000009725	hnrnpub	100	76.413	ENSAPOG00000017400	hnrnpub	100	76.074	Acanthochromis_polyacanthus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSAMEG00000009145	HNRNPU	77	68.085	Ailuropoda_melanoleuca
ENSTNIG00000009725	hnrnpub	100	72.877	ENSACIG00000012138	hnrnpub	100	71.970	Amphilophus_citrinellus
ENSTNIG00000009725	hnrnpub	100	77.262	ENSAOCG00000015843	hnrnpub	100	77.391	Amphiprion_ocellaris
ENSTNIG00000009725	hnrnpub	100	77.262	ENSAPEG00000014679	hnrnpub	100	77.391	Amphiprion_percula
ENSTNIG00000009725	hnrnpub	98	75.123	ENSATEG00000016178	hnrnpub	97	75.277	Anabas_testudineus
ENSTNIG00000009725	hnrnpub	91	69.048	ENSACAG00000004511	HNRNPU	77	69.048	Anolis_carolinensis
ENSTNIG00000009725	hnrnpub	90	68.085	ENSANAG00000033895	-	99	51.638	Aotus_nancymaae
ENSTNIG00000009725	hnrnpub	99	76.923	ENSACLG00000008165	hnrnpub	100	72.573	Astatotilapia_calliptera
ENSTNIG00000009725	hnrnpub	90	68.085	ENSBTAG00000007606	HNRNPU	85	56.109	Bos_taurus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSCJAG00000016914	HNRNPU	99	51.309	Callithrix_jacchus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSCAFG00020000918	HNRNPU	80	68.085	Canis_lupus_dingo
ENSTNIG00000009725	hnrnpub	90	68.085	ENSCHIG00000004900	HNRNPU	87	56.109	Capra_hircus
ENSTNIG00000009725	hnrnpub	90	70.213	ENSCPOG00000011887	HNRNPU	87	56.109	Cavia_porcellus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSCCAG00000037859	-	99	51.507	Cebus_capucinus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSCATG00000035273	HNRNPU	99	51.638	Cercocebus_atys
ENSTNIG00000009725	hnrnpub	90	70.213	ENSCLAG00000007100	HNRNPU	87	56.109	Chinchilla_lanigera
ENSTNIG00000009725	hnrnpub	90	68.085	ENSCSAG00000009219	HNRNPU	80	68.085	Chlorocebus_sabaeus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSCHOG00000001387	HNRNPU	76	68.085	Choloepus_hoffmanni
ENSTNIG00000009725	hnrnpub	89	58.418	ENSCPBG00000009415	HNRNPU	81	57.903	Chrysemys_picta_bellii
ENSTNIG00000009725	hnrnpub	90	68.085	ENSCANG00000022780	HNRNPU	99	51.369	Colobus_angolensis_palliatus
ENSTNIG00000009725	hnrnpub	95	76.744	ENSCGRG00001020525	Hnrnpu	81	76.744	Cricetulus_griseus_chok1gshd
ENSTNIG00000009725	hnrnpub	99	77.635	ENSCSEG00000010804	hnrnpub	100	70.012	Cynoglossus_semilaevis
ENSTNIG00000009725	hnrnpub	79	83.019	ENSCVAG00000004280	hnrnpub	95	64.901	Cyprinodon_variegatus
ENSTNIG00000009725	hnrnpub	100	59.016	ENSDARG00000015206	hnrnpua	100	56.730	Danio_rerio
ENSTNIG00000009725	hnrnpub	99	50.251	ENSDNOG00000000215	HNRNPU	99	52.141	Dasypus_novemcinctus
ENSTNIG00000009725	hnrnpub	90	79.070	ENSDORG00000015491	Hnrnpu	99	50.000	Dipodomys_ordii
ENSTNIG00000009725	hnrnpub	90	68.085	ENSETEG00000014565	HNRNPU	86	55.932	Echinops_telfairi
ENSTNIG00000009725	hnrnpub	91	68.085	ENSEASG00005003017	HNRNPU	90	56.259	Equus_asinus_asinus
ENSTNIG00000009725	hnrnpub	91	68.085	ENSECAG00000007955	HNRNPU	90	56.109	Equus_caballus
ENSTNIG00000009725	hnrnpub	100	55.082	ENSELUG00000011966	hnrnpua	98	64.632	Esox_lucius
ENSTNIG00000009725	hnrnpub	98	78.947	ENSELUG00000010733	hnrnpub	100	65.242	Esox_lucius
ENSTNIG00000009725	hnrnpub	90	68.085	ENSFCAG00000002156	HNRNPU	99	47.239	Felis_catus
ENSTNIG00000009725	hnrnpub	99	51.876	ENSFDAG00000006026	HNRNPU	99	53.966	Fukomys_damarensis
ENSTNIG00000009725	hnrnpub	100	70.096	ENSFHEG00000022639	hnrnpub	100	70.167	Fundulus_heteroclitus
ENSTNIG00000009725	hnrnpub	99	73.846	ENSGMOG00000001755	hnrnpub	99	66.306	Gadus_morhua
ENSTNIG00000009725	hnrnpub	91	64.815	ENSGALG00000010671	HNRNPU	83	55.235	Gallus_gallus
ENSTNIG00000009725	hnrnpub	99	76.934	ENSGAFG00000009369	hnrnpub	100	70.188	Gambusia_affinis
ENSTNIG00000009725	hnrnpub	98	80.000	ENSGACG00000004679	hnrnpub	99	68.281	Gasterosteus_aculeatus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSGGOG00000004061	HNRNPU	99	51.638	Gorilla_gorilla
ENSTNIG00000009725	hnrnpub	90	70.213	ENSHGLG00000010594	-	90	56.109	Heterocephalus_glaber_female
ENSTNIG00000009725	hnrnpub	99	51.684	ENSHGLG00100015093	HNRNPU	99	53.776	Heterocephalus_glaber_male
ENSTNIG00000009725	hnrnpub	96	83.784	ENSHCOG00000020091	hnrnpub	100	66.106	Hippocampus_comes
ENSTNIG00000009725	hnrnpub	92	84.783	ENSIPUG00000007749	hnrnpu	100	62.954	Ictalurus_punctatus
ENSTNIG00000009725	hnrnpub	90	76.744	ENSJJAG00000011371	Hnrnpu	78	76.744	Jaculus_jaculus
ENSTNIG00000009725	hnrnpub	100	72.561	ENSKMAG00000004532	hnrnpub	100	72.847	Kryptolebias_marmoratus
ENSTNIG00000009725	hnrnpub	92	73.913	ENSLACG00000017463	HNRNPU	95	47.404	Latimeria_chalumnae
ENSTNIG00000009725	hnrnpub	96	84.783	ENSLOCG00000016652	hnrnpua	99	58.488	Lepisosteus_oculatus
ENSTNIG00000009725	hnrnpub	91	68.085	ENSLAFG00000021377	HNRNPU	81	68.085	Loxodonta_africana
ENSTNIG00000009725	hnrnpub	90	68.085	ENSMFAG00000037308	HNRNPU	99	51.638	Macaca_fascicularis
ENSTNIG00000009725	hnrnpub	90	68.085	ENSMMUG00000021098	HNRNPU	81	68.085	Macaca_mulatta
ENSTNIG00000009725	hnrnpub	90	68.085	ENSMNEG00000043645	HNRNPU	99	51.638	Macaca_nemestrina
ENSTNIG00000009725	hnrnpub	100	77.750	ENSMAMG00000007196	hnrnpub	100	77.063	Mastacembelus_armatus
ENSTNIG00000009725	hnrnpub	99	76.923	ENSMZEG00005003185	hnrnpub	100	72.816	Maylandia_zebra
ENSTNIG00000009725	hnrnpub	90	76.744	ENSMAUG00000008842	Hnrnpu	80	76.744	Mesocricetus_auratus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSMICG00000004616	HNRNPU	99	47.960	Microcebus_murinus
ENSTNIG00000009725	hnrnpub	92	76.744	ENSMOCG00000015623	Hnrnpu	80	76.744	Microtus_ochrogaster
ENSTNIG00000009725	hnrnpub	90	73.810	ENSMODG00000006515	HNRNPU	77	70.833	Monodelphis_domestica
ENSTNIG00000009725	hnrnpub	94	78.067	ENSMALG00000018243	hnrnpub	99	75.474	Monopterus_albus
ENSTNIG00000009725	hnrnpub	90	76.744	MGP_CAROLIEiJ_G0014962	Hnrnpu	80	76.744	Mus_caroli
ENSTNIG00000009725	hnrnpub	90	76.744	ENSMUSG00000039630	Hnrnpu	80	76.744	Mus_musculus
ENSTNIG00000009725	hnrnpub	90	76.744	MGP_PahariEiJ_G0028193	Hnrnpu	80	76.744	Mus_pahari
ENSTNIG00000009725	hnrnpub	90	76.744	MGP_SPRETEiJ_G0015761	Hnrnpu	80	76.744	Mus_spretus
ENSTNIG00000009725	hnrnpub	91	68.085	ENSMLUG00000000475	HNRNPU	90	54.955	Myotis_lucifugus
ENSTNIG00000009725	hnrnpub	90	76.744	ENSNGAG00000019075	Hnrnpu	79	76.744	Nannospalax_galili
ENSTNIG00000009725	hnrnpub	77	73.810	ENSMEUG00000000541	HNRNPU	75	70.833	Notamacropus_eugenii
ENSTNIG00000009725	hnrnpub	100	77.330	ENSONIG00000001260	hnrnpub	100	75.945	Oreochromis_niloticus
ENSTNIG00000009725	hnrnpub	88	68.085	ENSOCUG00000014469	HNRNPU	78	56.037	Oryctolagus_cuniculus
ENSTNIG00000009725	hnrnpub	100	73.934	ENSORLG00000016114	hnrnpub	100	73.203	Oryzias_latipes
ENSTNIG00000009725	hnrnpub	100	73.886	ENSORLG00020005363	hnrnpub	100	73.447	Oryzias_latipes_hni
ENSTNIG00000009725	hnrnpub	90	68.085	ENSOGAG00000014024	HNRNPU	80	68.085	Otolemur_garnettii
ENSTNIG00000009725	hnrnpub	90	68.085	ENSOARG00000004985	HNRNPU	87	68.085	Ovis_aries
ENSTNIG00000009725	hnrnpub	90	68.085	ENSPPAG00000038652	HNRNPU	99	51.638	Pan_paniscus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSPPRG00000002662	HNRNPU	78	68.085	Panthera_pardus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSPTRG00000002182	HNRNPU	99	51.638	Pan_troglodytes
ENSTNIG00000009725	hnrnpub	90	68.085	ENSPANG00000011643	HNRNPU	99	51.638	Papio_anubis
ENSTNIG00000009725	hnrnpub	98	84.783	ENSPKIG00000006885	hnrnpua	100	59.783	Paramormyrops_kingsleyae
ENSTNIG00000009725	hnrnpub	100	60.658	ENSPKIG00000022332	hnrnpub	100	60.287	Paramormyrops_kingsleyae
ENSTNIG00000009725	hnrnpub	90	73.810	ENSPCIG00000008657	HNRNPU	77	70.833	Phascolarctos_cinereus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSPCOG00000018655	-	99	47.960	Propithecus_coquereli
ENSTNIG00000009725	hnrnpub	90	65.957	ENSPCOG00000003883	-	99	48.826	Propithecus_coquereli
ENSTNIG00000009725	hnrnpub	90	68.085	ENSPVAG00000002581	HNRNPU	85	56.109	Pteropus_vampyrus
ENSTNIG00000009725	hnrnpub	100	62.198	ENSPNAG00000001055	hnrnpub	100	61.408	Pygocentrus_nattereri
ENSTNIG00000009725	hnrnpub	90	76.744	ENSRNOG00000033790	Hnrnpu	80	76.744	Rattus_norvegicus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSRBIG00000031519	HNRNPU	99	50.983	Rhinopithecus_bieti
ENSTNIG00000009725	hnrnpub	92	68.085	ENSRROG00000041642	HNRNPU	99	51.369	Rhinopithecus_roxellana
ENSTNIG00000009725	hnrnpub	99	86.957	ENSSFOG00015001124	hnrnpub	100	62.545	Scleropages_formosus
ENSTNIG00000009725	hnrnpub	99	84.783	ENSSFOG00015019004	hnrnpu	99	66.258	Scleropages_formosus
ENSTNIG00000009725	hnrnpub	99	80.057	ENSSMAG00000003607	hnrnpub	100	73.460	Scophthalmus_maximus
ENSTNIG00000009725	hnrnpub	99	82.026	ENSSLDG00000004899	hnrnpub	100	74.224	Seriola_lalandi_dorsalis
ENSTNIG00000009725	hnrnpub	91	73.171	ENSSPUG00000011393	HNRNPU	77	73.810	Sphenodon_punctatus
ENSTNIG00000009725	hnrnpub	90	68.085	ENSSSCG00000010877	HNRNPU	80	68.085	Sus_scrofa
ENSTNIG00000009725	hnrnpub	100	81.775	ENSTRUG00000007759	hnrnpub	100	83.272	Takifugu_rubripes
ENSTNIG00000009725	hnrnpub	89	75.000	ENSUAMG00000021120	HNRNPU	99	51.404	Ursus_americanus
ENSTNIG00000009725	hnrnpub	90	62.500	ENSUMAG00000012322	HNRNPU	100	50.244	Ursus_maritimus
ENSTNIG00000009725	hnrnpub	83	68.085	ENSVPAG00000010520	HNRNPU	90	52.101	Vicugna_pacos
ENSTNIG00000009725	hnrnpub	90	68.085	ENSVVUG00000026524	HNRNPU	80	68.085	Vulpes_vulpes
ENSTNIG00000009725	hnrnpub	98	80.000	ENSXETG00000011386	hnrnpu	99	49.931	Xenopus_tropicalis