EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000009895 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2662 bases
Position: chr12:1168398-1171059
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000012786	RNA_pol_3_Rpc31	PF11705.8	8.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000012978	-	651	-	ENSTNIP00000012786	216 (aa)	-	H3CX01

Gene Model

Click here to download ENSTNIG00000009895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000009895	-	96	39.906	ENSTNIG00000002936	-	94	43.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009895	-	52	41.880	ENSCSEG00000020402	-	54	40.741	Cynoglossus_semilaevis
ENSTNIG00000009895	-	94	40.000	ENSETEG00000008407	-	94	40.000	Echinops_telfairi
ENSTNIG00000009895	-	70	43.949	ENSEASG00005019647	-	70	43.537	Equus_asinus_asinus
ENSTNIG00000009895	-	94	36.232	ENSECAG00000015900	-	93	40.865	Equus_caballus
ENSTNIG00000009895	-	94	40.654	ENSLAFG00000011013	-	94	40.654	Loxodonta_africana
ENSTNIG00000009895	-	94	38.424	ENSMAUG00000007964	-	91	38.424	Mesocricetus_auratus
ENSTNIG00000009895	-	98	36.726	ENSMMOG00000011671	-	94	38.785	Mola_mola
ENSTNIG00000009895	-	94	41.038	ENSMODG00000018754	-	94	43.662	Monodelphis_domestica
ENSTNIG00000009895	-	99	46.818	ENSMODG00000020218	-	95	46.190	Monodelphis_domestica
ENSTNIG00000009895	-	70	42.581	ENSPKIG00000013127	-	78	41.176	Paramormyrops_kingsleyae
ENSTNIG00000009895	-	96	54.762	ENSPMGG00000012296	-	95	57.353	Periophthalmus_magnuspinnatus
ENSTNIG00000009895	-	72	40.964	ENSPMAG00000001964	-	92	36.957	Petromyzon_marinus
ENSTNIG00000009895	-	94	39.070	ENSSFOG00015010803	polr3gl	95	42.326	Scleropages_formosus
ENSTNIG00000009895	-	53	44.538	ENSTRUG00000025308	-	51	44.643	Takifugu_rubripes
ENSTNIG00000009895	-	96	36.607	ENSTBEG00000002278	-	89	35.981	Tupaia_belangeri
ENSTNIG00000009895	-	66	75.862	ENSTTRG00000017113	-	65	75.862	Tursiops_truncatus
ENSTNIG00000009895	-	99	42.009	ENSXETG00000011053	polr3gl	94	44.976	Xenopus_tropicalis