EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000009902 (Gene tree)
Gene ID: -
Gene Symbol: fam172a
Alias: si:dkey-172f14.1|zgc:64188
Full Name: family with sequence similarity 172%2C member A
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 86474 bases
Position: chr12:1512060-1598533
Accession: ZDB-GENE-040426-1396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000012794	Arb2	PF09757.9	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000012986	-	996	-	ENSTNIP00000012794	332 (aa)	-	H3CX09

Gene Model

Click here to download ENSTNIG00000009902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009902's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009902	fam172a	99	59.036	ENSG00000113391	FAM172A	77	79.747	Homo_sapiens
ENSTNIG00000009902	fam172a	100	59.226	ENSAPLG00000004055	FAM172A	79	57.186	Anas_platyrhynchos
ENSTNIG00000009902	fam172a	50	39.157	ENSAPLG00000011555	-	64	38.554	Anas_platyrhynchos
ENSTNIG00000009902	fam172a	100	58.333	ENSACAG00000013305	FAM172A	85	55.689	Anolis_carolinensis
ENSTNIG00000009902	fam172a	99	53.614	ENSANAG00000035869	FAM172A	80	51.515	Aotus_nancymaae
ENSTNIG00000009902	fam172a	99	59.337	ENSBTAG00000050195	FAM172A	78	56.970	Bos_taurus
ENSTNIG00000009902	fam172a	99	59.036	ENSCJAG00000010444	FAM172A	78	56.970	Callithrix_jacchus
ENSTNIG00000009902	fam172a	99	59.036	ENSCAFG00000008064	FAM172A	88	56.970	Canis_familiaris
ENSTNIG00000009902	fam172a	99	59.036	ENSCAFG00020006210	FAM172A	78	56.970	Canis_lupus_dingo
ENSTNIG00000009902	fam172a	99	59.337	ENSCHIG00000008440	FAM172A	78	56.970	Capra_hircus
ENSTNIG00000009902	fam172a	74	51.807	ENSTSYG00000006286	FAM172A	77	48.988	Carlito_syrichta
ENSTNIG00000009902	fam172a	74	54.808	ENSCAPG00000014103	-	93	56.000	Cavia_aperea
ENSTNIG00000009902	fam172a	99	59.036	ENSCCAG00000023116	FAM172A	81	55.263	Cebus_capucinus
ENSTNIG00000009902	fam172a	100	59.226	ENSCLAG00000005472	FAM172A	85	79.747	Chinchilla_lanigera
ENSTNIG00000009902	fam172a	90	33.876	ENSCPBG00000004402	-	77	33.876	Chrysemys_picta_bellii
ENSTNIG00000009902	fam172a	75	51.190	ENSCANG00000040412	FAM172A	84	48.400	Colobus_angolensis_palliatus
ENSTNIG00000009902	fam172a	99	58.735	ENSDNOG00000004689	FAM172A	78	56.667	Dasypus_novemcinctus
ENSTNIG00000009902	fam172a	75	51.190	ENSDORG00000013558	Fam172a	80	48.400	Dipodomys_ordii
ENSTNIG00000009902	fam172a	88	32.082	ENSEBUG00000016097	-	53	31.741	Eptatretus_burgeri
ENSTNIG00000009902	fam172a	99	59.337	ENSECAG00000018274	FAM172A	87	57.273	Equus_caballus
ENSTNIG00000009902	fam172a	81	53.506	ENSEEUG00000002887	FAM172A	64	50.929	Erinaceus_europaeus
ENSTNIG00000009902	fam172a	100	67.169	ENSELUG00000017647	fam172a	78	65.964	Esox_lucius
ENSTNIG00000009902	fam172a	99	59.639	ENSFCAG00000025443	FAM172A	78	57.576	Felis_catus
ENSTNIG00000009902	fam172a	100	58.631	ENSFALG00000009072	FAM172A	89	56.587	Ficedula_albicollis
ENSTNIG00000009902	fam172a	85	36.972	ENSFALG00000006501	-	77	36.972	Ficedula_albicollis
ENSTNIG00000009902	fam172a	100	58.036	ENSGALG00000014661	FAM172A	79	55.988	Gallus_gallus
ENSTNIG00000009902	fam172a	100	58.929	ENSGAGG00000003839	FAM172A	79	56.886	Gopherus_agassizii
ENSTNIG00000009902	fam172a	85	34.859	ENSGAGG00000022828	-	74	34.915	Gopherus_agassizii
ENSTNIG00000009902	fam172a	99	59.036	ENSGGOG00000010296	FAM172A	78	56.970	Gorilla_gorilla
ENSTNIG00000009902	fam172a	99	59.036	ENSHGLG00000011178	FAM172A	77	81.013	Heterocephalus_glaber_female
ENSTNIG00000009902	fam172a	99	59.036	ENSHGLG00100013340	FAM172A	91	81.013	Heterocephalus_glaber_male
ENSTNIG00000009902	fam172a	99	59.036	ENSSTOG00000009918	FAM172A	78	56.970	Ictidomys_tridecemlineatus
ENSTNIG00000009902	fam172a	89	38.983	ENSLACG00000001532	si:ch73-41e3.7	76	38.983	Latimeria_chalumnae
ENSTNIG00000009902	fam172a	100	63.554	ENSLOCG00000001629	fam172a	79	62.651	Lepisosteus_oculatus
ENSTNIG00000009902	fam172a	75	51.190	ENSMFAG00000001171	FAM172A	84	48.400	Macaca_fascicularis
ENSTNIG00000009902	fam172a	95	58.991	ENSMNEG00000039938	FAM172A	84	48.400	Macaca_nemestrina
ENSTNIG00000009902	fam172a	99	59.036	ENSMICG00000030403	FAM172A	78	56.970	Microcebus_murinus
ENSTNIG00000009902	fam172a	92	57.843	ENSMOCG00000003613	Fam172a	81	55.921	Microtus_ochrogaster
ENSTNIG00000009902	fam172a	100	58.631	ENSMODG00000020131	FAM172A	79	56.587	Monodelphis_domestica
ENSTNIG00000009902	fam172a	76	79.747	MGP_PahariEiJ_G0015818	Fam172a	77	79.747	Mus_pahari
ENSTNIG00000009902	fam172a	92	57.843	ENSNGAG00000019570	Fam172a	81	55.592	Nannospalax_galili
ENSTNIG00000009902	fam172a	75	51.190	ENSNLEG00000013903	FAM172A	81	48.400	Nomascus_leucogenys
ENSTNIG00000009902	fam172a	100	58.333	ENSOANG00000011068	FAM172A	88	55.988	Ornithorhynchus_anatinus
ENSTNIG00000009902	fam172a	99	58.735	ENSOCUG00000007299	FAM172A	77	56.667	Oryctolagus_cuniculus
ENSTNIG00000009902	fam172a	99	58.434	ENSOGAG00000015189	FAM172A	78	56.364	Otolemur_garnettii
ENSTNIG00000009902	fam172a	99	59.337	ENSOARG00000016711	FAM172A	74	56.970	Ovis_aries
ENSTNIG00000009902	fam172a	75	51.587	ENSPPAG00000030542	FAM172A	84	48.800	Pan_paniscus
ENSTNIG00000009902	fam172a	99	59.639	ENSPPRG00000006653	FAM172A	78	57.576	Panthera_pardus
ENSTNIG00000009902	fam172a	99	59.639	ENSPTIG00000012681	FAM172A	78	57.576	Panthera_tigris_altaica
ENSTNIG00000009902	fam172a	75	51.587	ENSPTRG00000017074	FAM172A	84	48.800	Pan_troglodytes
ENSTNIG00000009902	fam172a	75	51.190	ENSPANG00000011687	FAM172A	84	48.400	Papio_anubis
ENSTNIG00000009902	fam172a	100	64.157	ENSPKIG00000012314	fam172a	73	83.529	Paramormyrops_kingsleyae
ENSTNIG00000009902	fam172a	99	59.337	ENSPEMG00000009604	-	77	79.747	Peromyscus_maniculatus_bairdii
ENSTNIG00000009902	fam172a	100	58.929	ENSPCIG00000028612	FAM172A	79	56.886	Phascolarctos_cinereus
ENSTNIG00000009902	fam172a	51	57.895	ENSPCOG00000024072	FAM172A	67	53.846	Propithecus_coquereli
ENSTNIG00000009902	fam172a	75	51.587	ENSRNOG00000013844	Fam172a	91	49.200	Rattus_norvegicus
ENSTNIG00000009902	fam172a	75	51.190	ENSRROG00000023807	FAM172A	84	48.400	Rhinopithecus_roxellana
ENSTNIG00000009902	fam172a	99	59.337	ENSSBOG00000019860	FAM172A	83	57.273	Saimiri_boliviensis_boliviensis
ENSTNIG00000009902	fam172a	100	58.333	ENSSHAG00000013743	FAM172A	79	56.287	Sarcophilus_harrisii
ENSTNIG00000009902	fam172a	100	59.226	ENSSPUG00000008161	FAM172A	79	56.886	Sphenodon_punctatus
ENSTNIG00000009902	fam172a	99	59.337	ENSSSCG00000027608	FAM172A	86	56.970	Sus_scrofa
ENSTNIG00000009902	fam172a	84	35.336	ENSTGUG00000013623	-	84	35.336	Taeniopygia_guttata
ENSTNIG00000009902	fam172a	95	58.544	ENSTGUG00000000715	FAM172A	82	56.369	Taeniopygia_guttata
ENSTNIG00000009902	fam172a	99	58.434	ENSTTRG00000001521	FAM172A	78	56.364	Tursiops_truncatus
ENSTNIG00000009902	fam172a	99	59.036	ENSUMAG00000005442	FAM172A	87	56.970	Ursus_maritimus
ENSTNIG00000009902	fam172a	99	59.036	ENSVVUG00000022112	FAM172A	86	56.970	Vulpes_vulpes
ENSTNIG00000009902	fam172a	100	57.186	ENSXETG00000011592	fam172a	78	54.627	Xenopus_tropicalis
ENSTNIG00000009902	fam172a	93	35.922	ENSXETG00000033027	-	80	35.556	Xenopus_tropicalis