EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000009940 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 13610 bases
Position: chr7:3653310-3666919
Accession: ZDB-GENE-030131-9180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000012832	Exo_endo_phos	PF03372.23	6.3e-15	1	1
ENSTNIP00000003369	Exo_endo_phos	PF03372.23	7.4e-15	1	1
ENSTNIP00000012832	DUF1866	PF08952.11	4.8e-60	1	1
ENSTNIP00000003369	DUF1866	PF08952.11	5.1e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013024	-	3996	-	ENSTNIP00000012832	1332 (aa)	-	H3CX47
ENSTNIT00000000716	-	4200	-	ENSTNIP00000003369	1400 (aa)	-	H3C550

Gene Model

Click here to download ENSTNIG00000009940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009940's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009940	synj1	100	65.598	ENSG00000159082	SYNJ1	100	82.022	Homo_sapiens
ENSTNIG00000009940	synj1	94	84.360	ENSAPOG00000002809	synj1	100	80.547	Acanthochromis_polyacanthus
ENSTNIG00000009940	synj1	100	65.154	ENSAMEG00000015028	SYNJ1	87	65.272	Ailuropoda_melanoleuca
ENSTNIG00000009940	synj1	100	77.609	ENSACIG00000008857	synj1	95	86.262	Amphilophus_citrinellus
ENSTNIG00000009940	synj1	98	80.739	ENSAOCG00000009835	synj1	100	81.227	Amphiprion_ocellaris
ENSTNIG00000009940	synj1	83	88.759	ENSAPEG00000021010	synj1	87	75.498	Amphiprion_percula
ENSTNIG00000009940	synj1	83	87.950	ENSATEG00000002306	synj1	86	76.226	Anabas_testudineus
ENSTNIG00000009940	synj1	99	66.205	ENSAPLG00000011832	SYNJ1	89	64.217	Anas_platyrhynchos
ENSTNIG00000009940	synj1	96	69.314	ENSACAG00000003006	-	99	68.393	Anolis_carolinensis
ENSTNIG00000009940	synj1	100	65.173	ENSANAG00000027325	SYNJ1	99	68.055	Aotus_nancymaae
ENSTNIG00000009940	synj1	98	79.680	ENSACLG00000002255	synj1	100	78.799	Astatotilapia_calliptera
ENSTNIG00000009940	synj1	83	82.911	ENSAMXG00000008208	synj1	88	70.750	Astyanax_mexicanus
ENSTNIG00000009940	synj1	100	66.911	ENSBTAG00000003063	SYNJ1	99	67.994	Bos_taurus
ENSTNIG00000009940	synj1	100	66.374	ENSCJAG00000009187	SYNJ1	99	68.003	Callithrix_jacchus
ENSTNIG00000009940	synj1	100	65.646	ENSCAFG00000009041	SYNJ1	100	64.361	Canis_familiaris
ENSTNIG00000009940	synj1	100	64.831	ENSCAFG00020025776	SYNJ1	85	72.000	Canis_lupus_dingo
ENSTNIG00000009940	synj1	100	65.687	ENSCHIG00000005095	SYNJ1	85	72.025	Capra_hircus
ENSTNIG00000009940	synj1	100	66.569	ENSTSYG00000014541	SYNJ1	99	67.525	Carlito_syrichta
ENSTNIG00000009940	synj1	85	58.644	ENSCAPG00000014483	SYNJ1	76	71.536	Cavia_aperea
ENSTNIG00000009940	synj1	100	65.449	ENSCPOG00000012182	SYNJ1	99	67.825	Cavia_porcellus
ENSTNIG00000009940	synj1	100	63.959	ENSCCAG00000020825	SYNJ1	99	67.979	Cebus_capucinus
ENSTNIG00000009940	synj1	100	65.284	ENSCATG00000033891	SYNJ1	99	67.979	Cercocebus_atys
ENSTNIG00000009940	synj1	100	64.971	ENSCLAG00000009796	SYNJ1	100	76.858	Chinchilla_lanigera
ENSTNIG00000009940	synj1	97	66.342	ENSCSAG00000009654	SYNJ1	99	68.096	Chlorocebus_sabaeus
ENSTNIG00000009940	synj1	80	71.336	ENSCHOG00000012390	SYNJ1	73	71.717	Choloepus_hoffmanni
ENSTNIG00000009940	synj1	93	69.603	ENSCPBG00000006402	SYNJ1	97	69.562	Chrysemys_picta_bellii
ENSTNIG00000009940	synj1	100	65.379	ENSCANG00000031359	SYNJ1	99	68.055	Colobus_angolensis_palliatus
ENSTNIG00000009940	synj1	100	65.841	ENSCGRG00001010861	Synj1	99	68.151	Cricetulus_griseus_chok1gshd
ENSTNIG00000009940	synj1	96	67.739	ENSCGRG00000015749	Synj1	100	76.858	Cricetulus_griseus_crigri
ENSTNIG00000009940	synj1	95	82.422	ENSCSEG00000019614	synj1	99	80.859	Cynoglossus_semilaevis
ENSTNIG00000009940	synj1	98	75.431	ENSCVAG00000019250	synj1	99	76.686	Cyprinodon_variegatus
ENSTNIG00000009940	synj1	83	82.616	ENSDARG00000025011	synj1	100	73.091	Danio_rerio
ENSTNIG00000009940	synj1	100	63.903	ENSDNOG00000010732	SYNJ1	89	62.914	Dasypus_novemcinctus
ENSTNIG00000009940	synj1	54	76.190	ENSDORG00000014735	-	100	76.297	Dipodomys_ordii
ENSTNIG00000009940	synj1	82	77.778	ENSETEG00000018674	SYNJ1	73	77.778	Echinops_telfairi
ENSTNIG00000009940	synj1	100	65.166	ENSEASG00005006287	SYNJ1	96	73.936	Equus_asinus_asinus
ENSTNIG00000009940	synj1	100	66.984	ENSECAG00000004829	SYNJ1	99	65.729	Equus_caballus
ENSTNIG00000009940	synj1	91	65.146	ENSEEUG00000005150	SYNJ1	85	65.146	Erinaceus_europaeus
ENSTNIG00000009940	synj1	100	72.210	ENSELUG00000009731	synj1	94	78.180	Esox_lucius
ENSTNIG00000009940	synj1	100	63.289	ENSFCAG00000012498	SYNJ1	99	68.006	Felis_catus
ENSTNIG00000009940	synj1	74	61.965	ENSFALG00000004680	SYNJ1	80	62.660	Ficedula_albicollis
ENSTNIG00000009940	synj1	96	67.656	ENSFDAG00000016818	SYNJ1	100	76.718	Fukomys_damarensis
ENSTNIG00000009940	synj1	99	77.770	ENSFHEG00000017689	synj1	88	72.691	Fundulus_heteroclitus
ENSTNIG00000009940	synj1	76	81.176	ENSGMOG00000014852	synj1	77	81.298	Gadus_morhua
ENSTNIG00000009940	synj1	99	64.286	ENSGALG00000034317	SYNJ1	83	63.710	Gallus_gallus
ENSTNIG00000009940	synj1	99	78.152	ENSGAFG00000019466	synj1	82	77.006	Gambusia_affinis
ENSTNIG00000009940	synj1	83	83.303	ENSGACG00000020575	synj1	99	74.255	Gasterosteus_aculeatus
ENSTNIG00000009940	synj1	100	65.547	ENSGAGG00000022523	SYNJ1	99	67.689	Gopherus_agassizii
ENSTNIG00000009940	synj1	100	66.471	ENSGGOG00000015945	SYNJ1	99	68.079	Gorilla_gorilla
ENSTNIG00000009940	synj1	91	88.129	ENSHBUG00000007774	synj1	99	79.869	Haplochromis_burtoni
ENSTNIG00000009940	synj1	100	65.691	ENSHGLG00000006420	SYNJ1	100	76.438	Heterocephalus_glaber_female
ENSTNIG00000009940	synj1	100	65.691	ENSHGLG00100012591	SYNJ1	100	76.438	Heterocephalus_glaber_male
ENSTNIG00000009940	synj1	93	85.490	ENSHCOG00000012774	synj1	82	86.907	Hippocampus_comes
ENSTNIG00000009940	synj1	83	82.796	ENSIPUG00000010691	SYNJ1	90	71.222	Ictalurus_punctatus
ENSTNIG00000009940	synj1	100	66.642	ENSSTOG00000015806	SYNJ1	99	68.247	Ictidomys_tridecemlineatus
ENSTNIG00000009940	synj1	100	61.260	ENSJJAG00000020168	Synj1	89	61.272	Jaculus_jaculus
ENSTNIG00000009940	synj1	83	86.960	ENSKMAG00000004221	synj1	93	81.406	Kryptolebias_marmoratus
ENSTNIG00000009940	synj1	99	79.777	ENSLBEG00000015081	synj1	88	86.809	Labrus_bergylta
ENSTNIG00000009940	synj1	99	65.469	ENSLACG00000005928	SYNJ1	90	63.586	Latimeria_chalumnae
ENSTNIG00000009940	synj1	99	71.302	ENSLOCG00000009230	synj1	95	67.627	Lepisosteus_oculatus
ENSTNIG00000009940	synj1	99	65.616	ENSLAFG00000011806	SYNJ1	88	64.780	Loxodonta_africana
ENSTNIG00000009940	synj1	98	64.062	ENSMFAG00000018883	SYNJ1	99	66.821	Macaca_fascicularis
ENSTNIG00000009940	synj1	100	65.211	ENSMMUG00000004624	SYNJ1	99	68.027	Macaca_mulatta
ENSTNIG00000009940	synj1	100	65.284	ENSMNEG00000040077	SYNJ1	94	68.027	Macaca_nemestrina
ENSTNIG00000009940	synj1	100	65.211	ENSMLEG00000037029	SYNJ1	99	67.903	Mandrillus_leucophaeus
ENSTNIG00000009940	synj1	99	80.233	ENSMAMG00000013404	synj1	87	76.273	Mastacembelus_armatus
ENSTNIG00000009940	synj1	83	88.219	ENSMZEG00005024358	synj1	99	79.388	Maylandia_zebra
ENSTNIG00000009940	synj1	100	63.428	ENSMGAG00000014522	SYNJ1	89	63.176	Meleagris_gallopavo
ENSTNIG00000009940	synj1	96	67.739	ENSMAUG00000009743	Synj1	100	76.858	Mesocricetus_auratus
ENSTNIG00000009940	synj1	100	66.716	ENSMICG00000034953	SYNJ1	99	68.385	Microcebus_murinus
ENSTNIG00000009940	synj1	91	84.576	ENSMMOG00000010203	synj1	97	88.423	Mola_mola
ENSTNIG00000009940	synj1	95	64.308	ENSMODG00000021073	SYNJ1	99	63.589	Monodelphis_domestica
ENSTNIG00000009940	synj1	99	79.564	ENSMALG00000014015	synj1	87	75.857	Monopterus_albus
ENSTNIG00000009940	synj1	100	66.618	MGP_CAROLIEiJ_G0020951	Synj1	100	76.999	Mus_caroli
ENSTNIG00000009940	synj1	100	66.133	ENSMUSG00000022973	Synj1	100	76.999	Mus_musculus
ENSTNIG00000009940	synj1	100	66.133	MGP_PahariEiJ_G0016656	Synj1	100	76.999	Mus_pahari
ENSTNIG00000009940	synj1	100	66.278	MGP_SPRETEiJ_G0021857	Synj1	100	77.139	Mus_spretus
ENSTNIG00000009940	synj1	100	66.325	ENSMPUG00000001153	SYNJ1	89	65.024	Mustela_putorius_furo
ENSTNIG00000009940	synj1	52	75.253	ENSMLUG00000026584	-	100	75.362	Myotis_lucifugus
ENSTNIG00000009940	synj1	61	60.567	ENSMLUG00000005764	-	84	58.425	Myotis_lucifugus
ENSTNIG00000009940	synj1	96	68.216	ENSNGAG00000000453	Synj1	100	76.578	Nannospalax_galili
ENSTNIG00000009940	synj1	91	81.299	ENSNBRG00000011936	synj1	95	81.420	Neolamprologus_brichardi
ENSTNIG00000009940	synj1	86	60.329	ENSNLEG00000003734	SYNJ1	98	61.605	Nomascus_leucogenys
ENSTNIG00000009940	synj1	85	59.119	ENSMEUG00000004158	-	73	59.119	Notamacropus_eugenii
ENSTNIG00000009940	synj1	92	73.533	ENSOPRG00000013602	SYNJ1	82	73.533	Ochotona_princeps
ENSTNIG00000009940	synj1	54	76.611	ENSODEG00000002409	-	100	76.718	Octodon_degus
ENSTNIG00000009940	synj1	99	83.063	ENSONIG00000004667	synj1	99	81.232	Oreochromis_niloticus
ENSTNIG00000009940	synj1	97	64.591	ENSOANG00000006929	SYNJ1	88	63.799	Ornithorhynchus_anatinus
ENSTNIG00000009940	synj1	100	64.624	ENSOCUG00000001420	SYNJ1	89	64.181	Oryctolagus_cuniculus
ENSTNIG00000009940	synj1	83	86.421	ENSORLG00000004320	synj1	99	77.786	Oryzias_latipes
ENSTNIG00000009940	synj1	83	84.353	ENSORLG00020011994	synj1	98	76.089	Oryzias_latipes_hni
ENSTNIG00000009940	synj1	83	86.421	ENSORLG00015018077	synj1	85	74.313	Oryzias_latipes_hsok
ENSTNIG00000009940	synj1	83	86.151	ENSOMEG00000014322	synj1	99	76.399	Oryzias_melastigma
ENSTNIG00000009940	synj1	100	62.672	ENSOGAG00000006010	SYNJ1	87	63.118	Otolemur_garnettii
ENSTNIG00000009940	synj1	100	66.180	ENSOARG00000013414	SYNJ1	86	64.899	Ovis_aries
ENSTNIG00000009940	synj1	100	65.525	ENSPPAG00000026784	SYNJ1	99	68.206	Pan_paniscus
ENSTNIG00000009940	synj1	100	65.698	ENSPPRG00000023469	SYNJ1	99	68.006	Panthera_pardus
ENSTNIG00000009940	synj1	100	65.843	ENSPTIG00000007930	SYNJ1	99	68.082	Panthera_tigris_altaica
ENSTNIG00000009940	synj1	100	65.525	ENSPTRG00000023787	SYNJ1	99	68.206	Pan_troglodytes
ENSTNIG00000009940	synj1	100	64.963	ENSPTRG00000048135	-	99	66.163	Pan_troglodytes
ENSTNIG00000009940	synj1	100	65.284	ENSPANG00000022531	SYNJ1	99	68.027	Papio_anubis
ENSTNIG00000009940	synj1	83	80.969	ENSPKIG00000022603	synj1	90	81.004	Paramormyrops_kingsleyae
ENSTNIG00000009940	synj1	93	77.664	ENSPMGG00000016831	synj1	93	76.867	Periophthalmus_magnuspinnatus
ENSTNIG00000009940	synj1	97	68.429	ENSPEMG00000018767	Synj1	100	77.279	Peromyscus_maniculatus_bairdii
ENSTNIG00000009940	synj1	78	55.461	ENSPMAG00000002887	synj1	80	55.423	Petromyzon_marinus
ENSTNIG00000009940	synj1	97	65.841	ENSPCIG00000016372	SYNJ1	99	66.566	Phascolarctos_cinereus
ENSTNIG00000009940	synj1	83	87.601	ENSPFOG00000016886	synj1	99	78.269	Poecilia_formosa
ENSTNIG00000009940	synj1	83	85.714	ENSPLAG00000017559	synj1	99	75.000	Poecilia_latipinna
ENSTNIG00000009940	synj1	99	77.850	ENSPMEG00000007643	synj1	88	72.739	Poecilia_mexicana
ENSTNIG00000009940	synj1	99	79.197	ENSPREG00000012412	synj1	100	78.223	Poecilia_reticulata
ENSTNIG00000009940	synj1	99	64.493	ENSPPYG00000011365	SYNJ1	96	66.911	Pongo_abelii
ENSTNIG00000009940	synj1	80	84.286	ENSPCAG00000009906	SYNJ1	65	84.286	Procavia_capensis
ENSTNIG00000009940	synj1	93	67.952	ENSPCOG00000024841	SYNJ1	94	68.039	Propithecus_coquereli
ENSTNIG00000009940	synj1	99	61.812	ENSPVAG00000000892	SYNJ1	89	62.126	Pteropus_vampyrus
ENSTNIG00000009940	synj1	91	81.882	ENSPNYG00000022989	synj1	99	78.855	Pundamilia_nyererei
ENSTNIG00000009940	synj1	83	83.602	ENSPNAG00000021119	synj1	91	83.810	Pygocentrus_nattereri
ENSTNIG00000009940	synj1	100	66.569	ENSRNOG00000002051	Synj1	99	68.627	Rattus_norvegicus
ENSTNIG00000009940	synj1	100	65.379	ENSRBIG00000034477	SYNJ1	99	67.979	Rhinopithecus_bieti
ENSTNIG00000009940	synj1	100	65.452	ENSRROG00000039256	SYNJ1	99	68.055	Rhinopithecus_roxellana
ENSTNIG00000009940	synj1	100	64.928	ENSSBOG00000021001	SYNJ1	99	67.852	Saimiri_boliviensis_boliviensis
ENSTNIG00000009940	synj1	97	65.097	ENSSHAG00000008538	SYNJ1	84	65.292	Sarcophilus_harrisii
ENSTNIG00000009940	synj1	100	74.021	ENSSFOG00015006095	synj1	90	70.509	Scleropages_formosus
ENSTNIG00000009940	synj1	98	75.683	ENSSMAG00000018066	synj1	98	77.289	Scophthalmus_maximus
ENSTNIG00000009940	synj1	83	88.489	ENSSDUG00000013058	synj1	86	76.162	Seriola_dumerili
ENSTNIG00000009940	synj1	100	77.858	ENSSLDG00000021406	synj1	99	79.956	Seriola_lalandi_dorsalis
ENSTNIG00000009940	synj1	68	72.943	ENSSARG00000009490	SYNJ1	64	72.943	Sorex_araneus
ENSTNIG00000009940	synj1	100	64.018	ENSSPUG00000012552	SYNJ1	72	72.000	Sphenodon_punctatus
ENSTNIG00000009940	synj1	100	72.964	ENSSPAG00000017029	synj1	83	86.661	Stegastes_partitus
ENSTNIG00000009940	synj1	78	87.777	ENSSPAG00000006812	SYNJ1	86	74.580	Stegastes_partitus
ENSTNIG00000009940	synj1	99	65.089	ENSSSCG00000012035	SYNJ1	99	67.393	Sus_scrofa
ENSTNIG00000009940	synj1	99	65.934	ENSTGUG00000013445	SYNJ1	89	63.874	Taeniopygia_guttata
ENSTNIG00000009940	synj1	98	88.686	ENSTRUG00000006907	synj1	83	91.590	Takifugu_rubripes
ENSTNIG00000009940	synj1	86	81.419	ENSTBEG00000016298	SYNJ1	76	81.419	Tupaia_belangeri
ENSTNIG00000009940	synj1	100	62.999	ENSTTRG00000002222	SYNJ1	89	60.970	Tursiops_truncatus
ENSTNIG00000009940	synj1	100	65.445	ENSUAMG00000018606	SYNJ1	98	75.182	Ursus_americanus
ENSTNIG00000009940	synj1	100	64.507	ENSUMAG00000018419	SYNJ1	99	74.663	Ursus_maritimus
ENSTNIG00000009940	synj1	86	87.143	ENSVPAG00000001241	SYNJ1	75	87.143	Vicugna_pacos
ENSTNIG00000009940	synj1	100	66.227	ENSVVUG00000023125	SYNJ1	99	68.015	Vulpes_vulpes
ENSTNIG00000009940	synj1	97	65.136	ENSXETG00000009899	synj1	89	62.003	Xenopus_tropicalis
ENSTNIG00000009940	synj1	90	87.320	ENSXCOG00000011896	synj1	85	87.343	Xiphophorus_couchianus
ENSTNIG00000009940	synj1	97	79.217	ENSXMAG00000017524	synj1	99	78.708	Xiphophorus_maculatus