EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000009945 (Gene tree)
Gene ID: -
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD-associated factor 4a
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 5997 bases
Position: chr7:3695912-3701908
Accession: ZDB-GENE-030131-9003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000012837	RRM_1	PF00076.22	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013029	-	3276	-	ENSTNIP00000012837	1092 (aa)	-	H3CX52

Gene Model

Click here to download ENSTNIG00000009945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009945	scaf4a	84	65.462	ENSAPOG00000002946	scaf4a	83	61.171	Acanthochromis_polyacanthus
ENSTNIG00000009945	scaf4a	57	60.352	ENSACAG00000002569	SCAF4	55	55.709	Anolis_carolinensis
ENSTNIG00000009945	scaf4a	60	57.101	ENSCAFG00020026019	SCAF4	76	60.236	Canis_lupus_dingo
ENSTNIG00000009945	scaf4a	61	56.930	ENSCCAG00000033727	SCAF4	66	54.717	Cebus_capucinus
ENSTNIG00000009945	scaf4a	81	63.121	ENSCSEG00000019549	scaf4a	83	55.676	Cynoglossus_semilaevis
ENSTNIG00000009945	scaf4a	61	53.448	ENSELUG00000002779	SCAF8	85	47.440	Esox_lucius
ENSTNIG00000009945	scaf4a	84	60.496	ENSGACG00000020580	scaf4a	97	59.649	Gasterosteus_aculeatus
ENSTNIG00000009945	scaf4a	52	83.908	ENSHCOG00000006849	scaf4a	79	87.500	Hippocampus_comes
ENSTNIG00000009945	scaf4a	53	70.414	ENSMODG00000021040	SCAF4	66	54.417	Monodelphis_domestica
ENSTNIG00000009945	scaf4a	64	78.322	ENSMALG00000013825	scaf4a	74	78.322	Monopterus_albus
ENSTNIG00000009945	scaf4a	51	53.793	ENSODEG00000007296	SCAF8	55	39.825	Octodon_degus
ENSTNIG00000009945	scaf4a	52	53.793	ENSORLG00020013853	scaf4b	59	68.362	Oryzias_latipes_hni
ENSTNIG00000009945	scaf4a	58	68.248	ENSPMGG00000016741	scaf4a	74	68.978	Periophthalmus_magnuspinnatus
ENSTNIG00000009945	scaf4a	52	70.414	ENSPCIG00000028183	SCAF4	86	47.113	Phascolarctos_cinereus
ENSTNIG00000009945	scaf4a	58	65.287	ENSPFOG00000017156	scaf4a	87	65.582	Poecilia_formosa
ENSTNIG00000009945	scaf4a	51	56.506	ENSPREG00000013510	scaf4b	51	73.103	Poecilia_reticulata
ENSTNIG00000009945	scaf4a	53	68.889	ENSRBIG00000040007	SCAF4	65	52.941	Rhinopithecus_bieti
ENSTNIG00000009945	scaf4a	53	70.414	ENSSHAG00000001581	SCAF4	68	53.325	Sarcophilus_harrisii
ENSTNIG00000009945	scaf4a	78	65.967	ENSSMAG00000017901	scaf4a	63	65.809	Scophthalmus_maximus
ENSTNIG00000009945	scaf4a	58	71.494	ENSTRUG00000023543	scaf4a	75	69.504	Takifugu_rubripes