EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000009990 (Gene tree)
Gene ID: -
Gene Symbol: ddx52
Alias: -
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 6137 bases
Position: chr7:4457157-4463293
Accession: ZDB-GENE-060623-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000003339	DEAD	PF00270.29	1.7e-36	1	1
ENSTNIP00000001509	DEAD	PF00270.29	1.7e-36	1	1
ENSTNIP00000012885	DEAD	PF00270.29	1.7e-36	1	1
ENSTNIP00000012884	DEAD	PF00270.29	1.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013076	-	2228	-	ENSTNIP00000012884	597 (aa)	-	H3CX99
ENSTNIT00000013077	-	1770	-	ENSTNIP00000012885	589 (aa)	-	H3CXA0
ENSTNIT00000003684	-	1806	-	ENSTNIP00000003339	602 (aa)	-	H3C520
ENSTNIT00000003420	-	1782	-	ENSTNIP00000001509	594 (aa)	-	H3BZU3

Gene Model

Click here to download ENSTNIG00000009990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009990's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000009990	ddx52	67	30.392	ENSTNIG00000002987	ddx27	52	30.392
ENSTNIG00000009990	ddx52	57	30.925	ENSTNIG00000017079	-	94	30.925
ENSTNIG00000009990	ddx52	63	30.133	ENSTNIG00000016295	ddx6	76	30.133
ENSTNIG00000009990	ddx52	65	31.620	ENSTNIG00000017834	ddx18	68	31.620
ENSTNIG00000009990	ddx52	77	32.000	ENSTNIG00000009822	ddx43	77	32.000
ENSTNIG00000009990	ddx52	62	31.865	ENSTNIG00000013515	DDX55	63	32.124
ENSTNIG00000009990	ddx52	67	30.467	ENSTNIG00000017510	DDX5	63	30.467
ENSTNIG00000009990	ddx52	68	32.542	ENSTNIG00000008991	DDX41	72	32.542
ENSTNIG00000009990	ddx52	72	33.410	ENSTNIG00000010081	ddx59	68	33.410
ENSTNIG00000009990	ddx52	56	31.302	ENSTNIG00000011352	ddx28	71	31.302
ENSTNIG00000009990	ddx52	68	30.435	ENSTNIG00000006247	-	77	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009990	ddx52	99	62.982	ENSG00000278053	DDX52	99	62.982	Homo_sapiens
ENSTNIG00000009990	ddx52	99	80.952	ENSAPOG00000008759	ddx52	86	81.500	Acanthochromis_polyacanthus
ENSTNIG00000009990	ddx52	99	61.655	ENSAMEG00000013159	DDX52	99	62.331	Ailuropoda_melanoleuca
ENSTNIG00000009990	ddx52	93	79.218	ENSACIG00000002843	ddx52	99	79.929	Amphilophus_citrinellus
ENSTNIG00000009990	ddx52	98	81.063	ENSAOCG00000007983	ddx52	87	81.063	Amphiprion_ocellaris
ENSTNIG00000009990	ddx52	98	81.229	ENSAOCG00000000356	-	86	81.229	Amphiprion_ocellaris
ENSTNIG00000009990	ddx52	98	80.693	ENSAPEG00000023456	ddx52	86	81.395	Amphiprion_percula
ENSTNIG00000009990	ddx52	99	80.500	ENSATEG00000021525	ddx52	87	80.737	Anabas_testudineus
ENSTNIG00000009990	ddx52	82	67.556	ENSACAG00000006395	DDX52	94	67.556	Anolis_carolinensis
ENSTNIG00000009990	ddx52	99	63.149	ENSANAG00000028587	DDX52	99	63.149	Aotus_nancymaae
ENSTNIG00000009990	ddx52	98	80.912	ENSACLG00000021447	ddx52	93	81.757	Astatotilapia_calliptera
ENSTNIG00000009990	ddx52	98	68.634	ENSAMXG00000024377	ddx52	98	67.590	Astyanax_mexicanus
ENSTNIG00000009990	ddx52	99	61.538	ENSBTAG00000010313	DDX52	99	61.706	Bos_taurus
ENSTNIG00000009990	ddx52	73	42.825	WBGene00011032	R05D11.4	77	42.151	Caenorhabditis_elegans
ENSTNIG00000009990	ddx52	99	63.149	ENSCJAG00000015190	DDX52	99	63.149	Callithrix_jacchus
ENSTNIG00000009990	ddx52	99	61.655	ENSCAFG00000013554	-	99	61.655	Canis_familiaris
ENSTNIG00000009990	ddx52	99	62.395	ENSCAFG00000018145	-	99	62.395	Canis_familiaris
ENSTNIG00000009990	ddx52	99	62.027	ENSCAFG00020003753	DDX52	97	62.284	Canis_lupus_dingo
ENSTNIG00000009990	ddx52	99	61.993	ENSCHIG00000006275	DDX52	99	62.609	Capra_hircus
ENSTNIG00000009990	ddx52	100	61.993	ENSTSYG00000002996	DDX52	99	61.993	Carlito_syrichta
ENSTNIG00000009990	ddx52	92	52.007	ENSCAPG00000010436	DDX52	98	52.007	Cavia_aperea
ENSTNIG00000009990	ddx52	100	62.669	ENSCPOG00000001232	DDX52	99	62.669	Cavia_porcellus
ENSTNIG00000009990	ddx52	99	63.819	ENSCCAG00000023213	DDX52	99	63.819	Cebus_capucinus
ENSTNIG00000009990	ddx52	99	62.647	ENSCATG00000041437	DDX52	99	62.876	Cercocebus_atys
ENSTNIG00000009990	ddx52	100	62.563	ENSCLAG00000016292	DDX52	99	62.563	Chinchilla_lanigera
ENSTNIG00000009990	ddx52	99	62.814	ENSCSAG00000006122	DDX52	99	62.814	Chlorocebus_sabaeus
ENSTNIG00000009990	ddx52	81	77.844	ENSCHOG00000007413	DDX52	80	77.844	Choloepus_hoffmanni
ENSTNIG00000009990	ddx52	98	60.631	ENSCPBG00000009806	DDX52	96	60.461	Chrysemys_picta_bellii
ENSTNIG00000009990	ddx52	77	51.261	ENSCING00000016218	-	98	51.496	Ciona_intestinalis
ENSTNIG00000009990	ddx52	65	56.771	ENSCSAVG00000003835	-	98	56.061	Ciona_savignyi
ENSTNIG00000009990	ddx52	99	62.709	ENSCANG00000035140	DDX52	99	62.709	Colobus_angolensis_palliatus
ENSTNIG00000009990	ddx52	99	63.176	ENSCGRG00001020695	Ddx52	99	63.176	Cricetulus_griseus_chok1gshd
ENSTNIG00000009990	ddx52	99	63.007	ENSCGRG00000008830	Ddx52	99	63.007	Cricetulus_griseus_crigri
ENSTNIG00000009990	ddx52	99	78.232	ENSCSEG00000010008	ddx52	89	78.798	Cynoglossus_semilaevis
ENSTNIG00000009990	ddx52	98	81.976	ENSCVAG00000005302	ddx52	98	82.414	Cyprinodon_variegatus
ENSTNIG00000009990	ddx52	98	68.330	ENSDARG00000100505	ddx52	96	68.707	Danio_rerio
ENSTNIG00000009990	ddx52	99	61.616	ENSDNOG00000047454	DDX52	96	62.565	Dasypus_novemcinctus
ENSTNIG00000009990	ddx52	100	63.255	ENSDORG00000004276	Ddx52	99	63.255	Dipodomys_ordii
ENSTNIG00000009990	ddx52	85	50.291	FBgn0036754	CG5589	82	51.434	Drosophila_melanogaster
ENSTNIG00000009990	ddx52	98	56.923	ENSETEG00000016042	DDX52	99	57.778	Echinops_telfairi
ENSTNIG00000009990	ddx52	64	40.050	ENSEBUG00000010838	-	91	40.050	Eptatretus_burgeri
ENSTNIG00000009990	ddx52	99	62.162	ENSEASG00005011275	DDX52	91	62.162	Equus_asinus_asinus
ENSTNIG00000009990	ddx52	99	62.331	ENSECAG00000012286	DDX52	99	62.331	Equus_caballus
ENSTNIG00000009990	ddx52	70	56.829	ENSEEUG00000001153	DDX52	68	57.421	Erinaceus_europaeus
ENSTNIG00000009990	ddx52	93	75.221	ENSELUG00000018002	ddx52	99	75.485	Esox_lucius
ENSTNIG00000009990	ddx52	99	62.331	ENSFCAG00000010573	DDX52	99	62.331	Felis_catus
ENSTNIG00000009990	ddx52	98	61.945	ENSFALG00000005155	DDX52	95	62.950	Ficedula_albicollis
ENSTNIG00000009990	ddx52	99	56.951	ENSFDAG00000011133	-	96	57.560	Fukomys_damarensis
ENSTNIG00000009990	ddx52	99	63.272	ENSFDAG00000008340	-	96	64.261	Fukomys_damarensis
ENSTNIG00000009990	ddx52	98	80.000	ENSFHEG00000017239	ddx52	90	80.438	Fundulus_heteroclitus
ENSTNIG00000009990	ddx52	99	72.109	ENSGMOG00000014879	ddx52	100	73.150	Gadus_morhua
ENSTNIG00000009990	ddx52	98	63.793	ENSGALG00000005489	DDX52	95	63.793	Gallus_gallus
ENSTNIG00000009990	ddx52	99	80.100	ENSGAFG00000000702	ddx52	95	78.922	Gambusia_affinis
ENSTNIG00000009990	ddx52	99	78.253	ENSGACG00000020624	ddx52	99	86.200	Gasterosteus_aculeatus
ENSTNIG00000009990	ddx52	98	59.635	ENSGAGG00000007234	DDX52	98	59.259	Gopherus_agassizii
ENSTNIG00000009990	ddx52	99	62.814	ENSGGOG00000028224	DDX52	99	62.814	Gorilla_gorilla
ENSTNIG00000009990	ddx52	98	79.768	ENSHBUG00000015638	ddx52	88	80.833	Haplochromis_burtoni
ENSTNIG00000009990	ddx52	88	50.677	ENSHGLG00000019205	-	95	50.677	Heterocephalus_glaber_female
ENSTNIG00000009990	ddx52	99	62.306	ENSHGLG00000006235	-	98	62.306	Heterocephalus_glaber_female
ENSTNIG00000009990	ddx52	75	71.719	ENSHGLG00100013765	-	83	71.719	Heterocephalus_glaber_male
ENSTNIG00000009990	ddx52	88	50.677	ENSHGLG00100018699	-	96	50.677	Heterocephalus_glaber_male
ENSTNIG00000009990	ddx52	99	74.703	ENSHCOG00000007966	ddx52	97	74.703	Hippocampus_comes
ENSTNIG00000009990	ddx52	81	76.181	ENSIPUG00000008623	ddx52	99	67.695	Ictalurus_punctatus
ENSTNIG00000009990	ddx52	51	70.000	ENSSTOG00000002550	DDX52	93	70.000	Ictidomys_tridecemlineatus
ENSTNIG00000009990	ddx52	100	62.838	ENSJJAG00000021877	Ddx52	99	63.176	Jaculus_jaculus
ENSTNIG00000009990	ddx52	99	78.878	ENSKMAG00000022270	ddx52	95	92.268	Kryptolebias_marmoratus
ENSTNIG00000009990	ddx52	99	80.200	ENSLBEG00000015403	ddx52	89	80.602	Labrus_bergylta
ENSTNIG00000009990	ddx52	98	62.027	ENSLACG00000012514	DDX52	95	61.655	Latimeria_chalumnae
ENSTNIG00000009990	ddx52	77	74.713	ENSLOCG00000005928	ddx52	92	74.713	Lepisosteus_oculatus
ENSTNIG00000009990	ddx52	98	59.828	ENSLAFG00000002635	DDX52	100	75.641	Loxodonta_africana
ENSTNIG00000009990	ddx52	99	62.647	ENSMFAG00000000640	DDX52	99	62.876	Macaca_fascicularis
ENSTNIG00000009990	ddx52	99	62.647	ENSMMUG00000002980	DDX52	99	62.876	Macaca_mulatta
ENSTNIG00000009990	ddx52	99	62.479	ENSMNEG00000043658	DDX52	99	62.709	Macaca_nemestrina
ENSTNIG00000009990	ddx52	99	62.982	ENSMLEG00000017518	DDX52	99	62.982	Mandrillus_leucophaeus
ENSTNIG00000009990	ddx52	98	80.944	ENSMAMG00000019719	ddx52	87	80.944	Mastacembelus_armatus
ENSTNIG00000009990	ddx52	98	79.768	ENSMZEG00005019044	ddx52	88	80.833	Maylandia_zebra
ENSTNIG00000009990	ddx52	93	64.209	ENSMGAG00000008091	DDX52	94	64.209	Meleagris_gallopavo
ENSTNIG00000009990	ddx52	99	62.521	ENSMAUG00000021084	Ddx52	99	62.521	Mesocricetus_auratus
ENSTNIG00000009990	ddx52	99	56.454	ENSMICG00000004290	-	99	56.672	Microcebus_murinus
ENSTNIG00000009990	ddx52	100	62.669	ENSMOCG00000009654	Ddx52	99	63.484	Microtus_ochrogaster
ENSTNIG00000009990	ddx52	99	79.899	ENSMMOG00000018825	ddx52	91	80.405	Mola_mola
ENSTNIG00000009990	ddx52	99	61.770	ENSMODG00000002493	DDX52	98	61.770	Monodelphis_domestica
ENSTNIG00000009990	ddx52	96	78.559	ENSMALG00000007621	ddx52	89	78.313	Monopterus_albus
ENSTNIG00000009990	ddx52	100	63.805	MGP_CAROLIEiJ_G0016888	Ddx52	99	64.262	Mus_caroli
ENSTNIG00000009990	ddx52	100	63.468	ENSMUSG00000020677	Ddx52	99	64.141	Mus_musculus
ENSTNIG00000009990	ddx52	99	63.317	MGP_PahariEiJ_G0018018	Ddx52	99	63.317	Mus_pahari
ENSTNIG00000009990	ddx52	100	63.636	MGP_SPRETEiJ_G0017733	Ddx52	99	63.758	Mus_spretus
ENSTNIG00000009990	ddx52	100	61.993	ENSMPUG00000015007	DDX52	99	62.162	Mustela_putorius_furo
ENSTNIG00000009990	ddx52	99	61.889	ENSMLUG00000007167	-	99	62.057	Myotis_lucifugus
ENSTNIG00000009990	ddx52	82	67.702	ENSMLUG00000024480	-	99	67.702	Myotis_lucifugus
ENSTNIG00000009990	ddx52	100	62.732	ENSNGAG00000020686	Ddx52	99	62.901	Nannospalax_galili
ENSTNIG00000009990	ddx52	90	81.516	ENSNBRG00000007750	ddx52	98	81.588	Neolamprologus_brichardi
ENSTNIG00000009990	ddx52	98	63.481	ENSNLEG00000002826	DDX52	99	62.479	Nomascus_leucogenys
ENSTNIG00000009990	ddx52	65	73.522	ENSMEUG00000011234	DDX52	97	73.522	Notamacropus_eugenii
ENSTNIG00000009990	ddx52	100	54.348	ENSOPRG00000003899	DDX52	99	55.351	Ochotona_princeps
ENSTNIG00000009990	ddx52	99	61.092	ENSODEG00000002857	-	98	61.158	Octodon_degus
ENSTNIG00000009990	ddx52	98	60.585	ENSODEG00000012814	-	99	60.585	Octodon_degus
ENSTNIG00000009990	ddx52	98	81.282	ENSONIG00000004869	ddx52	95	81.481	Oreochromis_niloticus
ENSTNIG00000009990	ddx52	87	65.517	ENSOANG00000007133	DDX52	86	65.698	Ornithorhynchus_anatinus
ENSTNIG00000009990	ddx52	98	63.085	ENSOCUG00000014532	DDX52	97	62.823	Oryctolagus_cuniculus
ENSTNIG00000009990	ddx52	98	77.627	ENSORLG00000005241	ddx52	91	75.292	Oryzias_latipes
ENSTNIG00000009990	ddx52	98	77.853	ENSORLG00015015546	ddx52	88	77.425	Oryzias_latipes_hsok
ENSTNIG00000009990	ddx52	98	78.231	ENSOMEG00000017602	ddx52	89	78.680	Oryzias_melastigma
ENSTNIG00000009990	ddx52	98	60.312	ENSOGAG00000000868	DDX52	99	59.898	Otolemur_garnettii
ENSTNIG00000009990	ddx52	99	61.824	ENSOARG00000002998	DDX52	99	61.824	Ovis_aries
ENSTNIG00000009990	ddx52	99	62.814	ENSPPAG00000028453	DDX52	99	62.814	Pan_paniscus
ENSTNIG00000009990	ddx52	99	62.162	ENSPPRG00000009742	DDX52	99	62.162	Panthera_pardus
ENSTNIG00000009990	ddx52	99	61.824	ENSPTIG00000013697	DDX52	99	61.824	Panthera_tigris_altaica
ENSTNIG00000009990	ddx52	99	62.647	ENSPTRG00000009058	DDX52	99	62.647	Pan_troglodytes
ENSTNIG00000009990	ddx52	99	62.479	ENSPANG00000022101	DDX52	99	62.709	Papio_anubis
ENSTNIG00000009990	ddx52	99	68.932	ENSPKIG00000013058	ddx52	98	68.810	Paramormyrops_kingsleyae
ENSTNIG00000009990	ddx52	98	61.368	ENSPSIG00000010226	DDX52	98	60.667	Pelodiscus_sinensis
ENSTNIG00000009990	ddx52	79	86.938	ENSPMGG00000005458	ddx52	94	86.938	Periophthalmus_magnuspinnatus
ENSTNIG00000009990	ddx52	99	62.838	ENSPEMG00000003263	Ddx52	99	62.838	Peromyscus_maniculatus_bairdii
ENSTNIG00000009990	ddx52	99	61.194	ENSPCIG00000017730	DDX52	89	61.969	Phascolarctos_cinereus
ENSTNIG00000009990	ddx52	98	80.508	ENSPFOG00000018378	ddx52	90	80.504	Poecilia_formosa
ENSTNIG00000009990	ddx52	98	80.339	ENSPLAG00000008368	ddx52	90	80.336	Poecilia_latipinna
ENSTNIG00000009990	ddx52	98	80.508	ENSPMEG00000002359	ddx52	90	80.504	Poecilia_mexicana
ENSTNIG00000009990	ddx52	98	80.034	ENSPREG00000016874	ddx52	90	80.034	Poecilia_reticulata
ENSTNIG00000009990	ddx52	99	62.500	ENSPPYG00000008221	DDX52	99	62.500	Pongo_abelii
ENSTNIG00000009990	ddx52	99	56.471	ENSPCAG00000005814	DDX52	99	56.471	Procavia_capensis
ENSTNIG00000009990	ddx52	99	62.331	ENSPVAG00000010462	DDX52	99	62.331	Pteropus_vampyrus
ENSTNIG00000009990	ddx52	98	80.104	ENSPNYG00000020730	ddx52	97	79.897	Pundamilia_nyererei
ENSTNIG00000009990	ddx52	98	69.347	ENSPNAG00000014707	ddx52	97	68.740	Pygocentrus_nattereri
ENSTNIG00000009990	ddx52	100	62.647	ENSRNOG00000002612	Ddx52	99	63.149	Rattus_norvegicus
ENSTNIG00000009990	ddx52	99	56.364	ENSRBIG00000032462	DDX52	99	56.364	Rhinopithecus_bieti
ENSTNIG00000009990	ddx52	99	57.621	ENSRROG00000034760	DDX52	99	57.621	Rhinopithecus_roxellana
ENSTNIG00000009990	ddx52	75	44.276	YGL171W	-	77	45.682	Saccharomyces_cerevisiae
ENSTNIG00000009990	ddx52	99	63.652	ENSSBOG00000035787	DDX52	99	63.652	Saimiri_boliviensis_boliviensis
ENSTNIG00000009990	ddx52	99	61.716	ENSSHAG00000013962	DDX52	97	61.667	Sarcophilus_harrisii
ENSTNIG00000009990	ddx52	99	68.932	ENSSFOG00015005055	ddx52	98	69.506	Scleropages_formosus
ENSTNIG00000009990	ddx52	98	80.134	ENSSMAG00000009788	ddx52	91	79.705	Scophthalmus_maximus
ENSTNIG00000009990	ddx52	98	81.650	ENSSDUG00000004022	ddx52	92	81.250	Seriola_dumerili
ENSTNIG00000009990	ddx52	98	81.926	ENSSLDG00000016999	ddx52	91	82.550	Seriola_lalandi_dorsalis
ENSTNIG00000009990	ddx52	76	85.612	ENSSARG00000000371	-	75	85.612	Sorex_araneus
ENSTNIG00000009990	ddx52	98	60.596	ENSSPUG00000000720	DDX52	97	60.258	Sphenodon_punctatus
ENSTNIG00000009990	ddx52	98	80.699	ENSSPAG00000014211	ddx52	87	80.065	Stegastes_partitus
ENSTNIG00000009990	ddx52	99	62.331	ENSSSCG00000021275	DDX52	99	62.331	Sus_scrofa
ENSTNIG00000009990	ddx52	98	63.390	ENSTGUG00000008303	-	100	63.390	Taeniopygia_guttata
ENSTNIG00000009990	ddx52	99	87.899	ENSTRUG00000017071	ddx52	86	88.403	Takifugu_rubripes
ENSTNIG00000009990	ddx52	77	57.396	ENSTBEG00000005982	DDX52	76	57.396	Tupaia_belangeri
ENSTNIG00000009990	ddx52	99	62.669	ENSTTRG00000008917	DDX52	99	62.669	Tursiops_truncatus
ENSTNIG00000009990	ddx52	99	61.486	ENSVPAG00000001979	DDX52	99	61.486	Vicugna_pacos
ENSTNIG00000009990	ddx52	99	61.856	ENSVVUG00000020209	DDX52	99	61.824	Vulpes_vulpes
ENSTNIG00000009990	ddx52	98	64.259	ENSXETG00000025903	ddx52	85	77.041	Xenopus_tropicalis
ENSTNIG00000009990	ddx52	98	80.303	ENSXMAG00000010805	ddx52	92	79.407	Xiphophorus_maculatus