EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000009993 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1460 bases
Position: chr7:4480824-4482283
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000012888	RRM_1	PF00076.22	7e-30	1	2
ENSTNIP00000012888	RRM_1	PF00076.22	7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013080	-	708	-	ENSTNIP00000012888	236 (aa)	-	H3CXA3

Gene Model

Click here to download ENSTNIG00000009993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009993's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000009993	-	77	63.736	ENSTNIG00000000697	srsf9	74	62.637
ENSTNIG00000009993	-	80	82.902	ENSTNIG00000016223	srsf1a	78	81.865
ENSTNIG00000009993	-	75	43.077	ENSTNIG00000001692	srsf6a	52	41.714
ENSTNIG00000009993	-	66	42.105	ENSTNIG00000016411	srsf5b	60	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009993	-	75	81.081	ENSACIG00000002623	-	96	81.622	Amphilophus_citrinellus
ENSTNIG00000009993	-	80	83.854	ENSACLG00000005676	-	78	84.375	Astatotilapia_calliptera
ENSTNIG00000009993	-	95	76.543	ENSACLG00000021693	-	81	77.561	Astatotilapia_calliptera
ENSTNIG00000009993	-	90	53.043	WBGene00004700	rsp-3	90	51.064	Caenorhabditis_elegans
ENSTNIG00000009993	-	53	64.567	ENSCING00000000257	-	75	64.567	Ciona_intestinalis
ENSTNIG00000009993	-	75	70.718	ENSCING00000007375	-	76	68.333	Ciona_intestinalis
ENSTNIG00000009993	-	53	63.281	ENSCSAVG00000003567	-	76	61.417	Ciona_savignyi
ENSTNIG00000009993	-	75	69.613	ENSCSAVG00000006093	-	91	66.667	Ciona_savignyi
ENSTNIG00000009993	-	75	65.241	FBgn0283477	SF2	73	63.102	Drosophila_melanogaster
ENSTNIG00000009993	-	87	67.826	ENSEBUG00000009582	-	84	73.575	Eptatretus_burgeri
ENSTNIG00000009993	-	81	81.500	ENSFHEG00000017425	-	98	79.787	Fundulus_heteroclitus
ENSTNIG00000009993	-	75	82.418	ENSGMOG00000010606	-	97	80.874	Gadus_morhua
ENSTNIG00000009993	-	82	81.463	ENSGAFG00000000609	-	80	81.095	Gambusia_affinis
ENSTNIG00000009993	-	80	83.938	ENSGAFG00000012721	-	78	82.902	Gambusia_affinis
ENSTNIG00000009993	-	75	82.778	ENSGACG00000011094	-	96	81.667	Gasterosteus_aculeatus
ENSTNIG00000009993	-	94	76.667	ENSHBUG00000015576	-	81	77.941	Haplochromis_burtoni
ENSTNIG00000009993	-	50	61.864	ENSHBUG00000015600	-	95	59.836	Haplochromis_burtoni
ENSTNIG00000009993	-	79	80.105	ENSHCOG00000008016	-	77	78.010	Hippocampus_comes
ENSTNIG00000009993	-	80	80.928	ENSMFAG00000034223	-	65	80.412	Macaca_fascicularis
ENSTNIG00000009993	-	81	79.310	ENSMZEG00005019071	-	99	77.368	Maylandia_zebra
ENSTNIG00000009993	-	80	83.854	ENSMZEG00005007947	-	78	84.375	Maylandia_zebra
ENSTNIG00000009993	-	81	86.294	ENSMMOG00000018849	-	79	85.279	Mola_mola
ENSTNIG00000009993	-	80	83.854	ENSNBRG00000019981	-	78	84.375	Neolamprologus_brichardi
ENSTNIG00000009993	-	81	83.333	ENSNBRG00000008134	-	77	82.812	Neolamprologus_brichardi
ENSTNIG00000009993	-	67	63.750	ENSOPRG00000004745	-	96	63.750	Ochotona_princeps
ENSTNIG00000009993	-	81	78.261	ENSONIG00000004857	-	81	78.744	Oreochromis_niloticus
ENSTNIG00000009993	-	71	50.000	ENSOCUG00000026856	-	97	50.595	Oryctolagus_cuniculus
ENSTNIG00000009993	-	81	81.818	ENSORLG00000005314	-	77	82.828	Oryzias_latipes
ENSTNIG00000009993	-	81	81.818	ENSORLG00015015497	-	77	82.828	Oryzias_latipes_hsok
ENSTNIG00000009993	-	81	80.788	ENSOMEG00000017711	-	77	81.773	Oryzias_melastigma
ENSTNIG00000009993	-	80	82.143	ENSPLAG00000019553	-	92	80.435	Poecilia_latipinna
ENSTNIG00000009993	-	75	83.333	ENSPLAG00000019613	-	72	82.222	Poecilia_latipinna
ENSTNIG00000009993	-	82	82.266	ENSPREG00000016792	-	80	81.910	Poecilia_reticulata
ENSTNIG00000009993	-	81	79.024	ENSPNYG00000020651	-	78	79.512	Pundamilia_nyererei
ENSTNIG00000009993	-	80	83.854	ENSPNYG00000017115	-	78	84.375	Pundamilia_nyererei
ENSTNIG00000009993	-	85	83.902	ENSSFOG00015004989	-	72	81.726	Scleropages_formosus
ENSTNIG00000009993	-	80	79.426	ENSSDUG00000003887	-	81	76.526	Seriola_dumerili
ENSTNIG00000009993	-	81	96.875	ENSTRUG00000017058	-	94	97.321	Takifugu_rubripes
ENSTNIG00000009993	-	82	84.615	ENSXCOG00000017888	-	79	83.246	Xiphophorus_couchianus
ENSTNIG00000009993	-	80	82.143	ENSXCOG00000009643	-	79	81.122	Xiphophorus_couchianus
ENSTNIG00000009993	-	82	81.863	ENSXMAG00000010797	-	80	81.500	Xiphophorus_maculatus