EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
ENSTNIG00000010189 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
HUPF1|KIAA0221|NORF1|RENT1|pNORF1|smg-2
Full Name
-
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Plus strand
Length
6499 bases
Position
chr1:19488560-19495058
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000013088UPF1_Zn_bindPF09416.101.9e-7411
ENSTNIP00000002898UPF1_Zn_bindPF09416.102e-7411
ENSTNIP00000000696UPF1_Zn_bindPF09416.101.2e-7211
ENSTNIP00000000696ResIIIPF04851.152e-0511
ENSTNIP00000013088ResIIIPF04851.152.1e-0511
ENSTNIP00000002898ResIIIPF04851.152.1e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000003730-3279-ENSTNIP000000006961092 (aa)-H3BXI3
ENSTNIT00000002508-3342-ENSTNIP000000028981113 (aa)-H3C3S9
ENSTNIT00000013280-3300-ENSTNIP000000130881099 (aa)-H3CXV3
Gene Model
Click here to download ENSTNIG00000010189's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010189's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000010189-10090.331ENSTNIG00000011076upf110090.331

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