EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000010260 (Gene tree)
Gene ID: -
Gene Symbol: TDP2 (1 of many)
Alias: TTRAP
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1351 bases
Position: chr3:1566748-1568098
Accession: 17768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013163	Exo_endo_phos	PF03372.23	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013355	TDP2 (1 of many)-201	787	-	ENSTNIP00000013163	263 (aa)	-	H3CY28

Gene Model

Click here to download ENSTNIG00000010260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000010260	TDP2	99	61.538	ENSTNIG00000017792	tdp2b	71	61.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010260	TDP2	99	54.023	ENSG00000111802	TDP2	83	54.023	Homo_sapiens
ENSTNIG00000010260	TDP2	97	70.866	ENSAPOG00000018379	-	89	70.866	Acanthochromis_polyacanthus
ENSTNIG00000010260	TDP2	97	51.953	ENSAMEG00000010230	TDP2	90	51.953	Ailuropoda_melanoleuca
ENSTNIG00000010260	TDP2	68	65.000	ENSAOCG00000010081	-	79	65.000	Amphiprion_ocellaris
ENSTNIG00000010260	TDP2	98	67.442	ENSAPEG00000004208	-	92	67.442	Amphiprion_percula
ENSTNIG00000010260	TDP2	98	63.878	ENSATEG00000010663	-	82	64.706	Anabas_testudineus
ENSTNIG00000010260	TDP2	96	52.756	ENSACAG00000002332	TDP2	68	52.756	Anolis_carolinensis
ENSTNIG00000010260	TDP2	99	53.640	ENSANAG00000020033	TDP2	70	53.640	Aotus_nancymaae
ENSTNIG00000010260	TDP2	99	61.303	ENSACLG00000016148	tdp2b	92	61.303	Astatotilapia_calliptera
ENSTNIG00000010260	TDP2	99	61.686	ENSACLG00000016132	tdp2b	87	61.686	Astatotilapia_calliptera
ENSTNIG00000010260	TDP2	99	62.069	ENSACLG00000016174	tdp2b	87	62.069	Astatotilapia_calliptera
ENSTNIG00000010260	TDP2	95	53.755	ENSAMXG00000036549	tdp2a	81	53.755	Astyanax_mexicanus
ENSTNIG00000010260	TDP2	95	58.730	ENSAMXG00000011775	tdp2b	65	58.730	Astyanax_mexicanus
ENSTNIG00000010260	TDP2	98	51.737	ENSBTAG00000000365	TDP2	70	51.737	Bos_taurus
ENSTNIG00000010260	TDP2	95	32.031	WBGene00013405	tdpt-1	67	32.031	Caenorhabditis_elegans
ENSTNIG00000010260	TDP2	99	53.640	ENSCJAG00000006074	TDP2	83	53.640	Callithrix_jacchus
ENSTNIG00000010260	TDP2	99	52.874	ENSCJAG00000021963	-	70	52.874	Callithrix_jacchus
ENSTNIG00000010260	TDP2	99	52.874	ENSCAFG00000010428	TDP2	87	52.874	Canis_familiaris
ENSTNIG00000010260	TDP2	99	52.874	ENSCAFG00020009994	TDP2	87	52.874	Canis_lupus_dingo
ENSTNIG00000010260	TDP2	99	51.341	ENSCHIG00000015294	-	87	51.341	Capra_hircus
ENSTNIG00000010260	TDP2	99	52.107	ENSTSYG00000037199	TDP2	82	52.107	Carlito_syrichta
ENSTNIG00000010260	TDP2	99	54.023	ENSCPOG00000006390	TDP2	70	54.023	Cavia_porcellus
ENSTNIG00000010260	TDP2	99	54.406	ENSCCAG00000022734	TDP2	83	54.406	Cebus_capucinus
ENSTNIG00000010260	TDP2	98	52.308	ENSCATG00000022076	TDP2	84	52.308	Cercocebus_atys
ENSTNIG00000010260	TDP2	99	53.640	ENSCLAG00000002072	TDP2	70	53.640	Chinchilla_lanigera
ENSTNIG00000010260	TDP2	98	52.308	ENSCSAG00000007769	TDP2	72	52.308	Chlorocebus_sabaeus
ENSTNIG00000010260	TDP2	97	53.906	ENSCPBG00000006551	TDP2	64	53.906	Chrysemys_picta_bellii
ENSTNIG00000010260	TDP2	98	52.308	ENSCANG00000040122	TDP2	84	52.308	Colobus_angolensis_palliatus
ENSTNIG00000010260	TDP2	97	51.953	ENSCGRG00001000384	Tdp2	68	51.953	Cricetulus_griseus_chok1gshd
ENSTNIG00000010260	TDP2	97	51.751	ENSCGRG00000010250	Tdp2	72	51.953	Cricetulus_griseus_crigri
ENSTNIG00000010260	TDP2	97	62.353	ENSCVAG00000003114	tdp2b	70	62.353	Cyprinodon_variegatus
ENSTNIG00000010260	TDP2	94	53.012	ENSDARG00000069941	tdp2a	55	53.012	Danio_rerio
ENSTNIG00000010260	TDP2	96	58.268	ENSDARG00000035954	tdp2b	65	58.268	Danio_rerio
ENSTNIG00000010260	TDP2	99	53.640	ENSDNOG00000044082	TDP2	69	53.640	Dasypus_novemcinctus
ENSTNIG00000010260	TDP2	97	52.529	ENSETEG00000019096	TDP2	91	52.529	Echinops_telfairi
ENSTNIG00000010260	TDP2	94	45.382	ENSEBUG00000006535	tdp2a	58	45.382	Eptatretus_burgeri
ENSTNIG00000010260	TDP2	98	50.579	ENSEASG00005007656	TDP2	70	50.579	Equus_asinus_asinus
ENSTNIG00000010260	TDP2	98	50.193	ENSECAG00000014264	TDP2	70	50.193	Equus_caballus
ENSTNIG00000010260	TDP2	94	52.610	ENSEEUG00000010776	TDP2	69	52.610	Erinaceus_europaeus
ENSTNIG00000010260	TDP2	97	59.615	ENSELUG00000016449	tdp2b	68	59.615	Esox_lucius
ENSTNIG00000010260	TDP2	99	50.575	ENSELUG00000009321	tdp2a	80	49.808	Esox_lucius
ENSTNIG00000010260	TDP2	97	52.734	ENSFCAG00000025612	TDP2	70	52.734	Felis_catus
ENSTNIG00000010260	TDP2	99	54.023	ENSFALG00000004710	TDP2	71	54.023	Ficedula_albicollis
ENSTNIG00000010260	TDP2	99	52.874	ENSFDAG00000006512	TDP2	87	52.874	Fukomys_damarensis
ENSTNIG00000010260	TDP2	98	63.707	ENSFHEG00000013560	-	88	63.707	Fundulus_heteroclitus
ENSTNIG00000010260	TDP2	97	55.469	ENSGALG00000013637	TDP2	68	55.469	Gallus_gallus
ENSTNIG00000010260	TDP2	97	53.516	ENSGAGG00000002853	TDP2	65	53.516	Gopherus_agassizii
ENSTNIG00000010260	TDP2	99	54.023	ENSGGOG00000014237	TDP2	83	54.023	Gorilla_gorilla
ENSTNIG00000010260	TDP2	99	61.686	ENSHBUG00000002714	tdp2b	71	61.686	Haplochromis_burtoni
ENSTNIG00000010260	TDP2	77	61.576	ENSHBUG00000005421	-	84	61.576	Haplochromis_burtoni
ENSTNIG00000010260	TDP2	99	53.257	ENSHGLG00000008655	TDP2	71	53.257	Heterocephalus_glaber_female
ENSTNIG00000010260	TDP2	99	53.257	ENSHGLG00100019087	TDP2	71	53.257	Heterocephalus_glaber_male
ENSTNIG00000010260	TDP2	98	57.143	ENSIPUG00000013691	tdp2b	68	57.143	Ictalurus_punctatus
ENSTNIG00000010260	TDP2	94	51.012	ENSJJAG00000021685	Tdp2	70	51.012	Jaculus_jaculus
ENSTNIG00000010260	TDP2	97	68.235	ENSKMAG00000015485	-	82	68.235	Kryptolebias_marmoratus
ENSTNIG00000010260	TDP2	97	53.725	ENSLACG00000008852	TDP2	69	53.725	Latimeria_chalumnae
ENSTNIG00000010260	TDP2	98	54.651	ENSLOCG00000005817	tdp2b	91	54.651	Lepisosteus_oculatus
ENSTNIG00000010260	TDP2	98	54.231	ENSLAFG00000002567	TDP2	73	54.231	Loxodonta_africana
ENSTNIG00000010260	TDP2	98	52.308	ENSMFAG00000045296	TDP2	84	51.923	Macaca_fascicularis
ENSTNIG00000010260	TDP2	98	52.308	ENSMMUG00000009803	TDP2	72	52.308	Macaca_mulatta
ENSTNIG00000010260	TDP2	98	52.308	ENSMNEG00000038003	TDP2	84	51.923	Macaca_nemestrina
ENSTNIG00000010260	TDP2	98	52.308	ENSMLEG00000028883	TDP2	84	52.308	Mandrillus_leucophaeus
ENSTNIG00000010260	TDP2	99	62.452	ENSMAMG00000013654	tdp2b	72	62.452	Mastacembelus_armatus
ENSTNIG00000010260	TDP2	99	62.069	ENSMZEG00005004126	tdp2b	88	62.069	Maylandia_zebra
ENSTNIG00000010260	TDP2	85	58.929	ENSMZEG00005003980	-	72	58.929	Maylandia_zebra
ENSTNIG00000010260	TDP2	99	61.303	ENSMZEG00005003950	tdp2b	71	61.303	Maylandia_zebra
ENSTNIG00000010260	TDP2	99	62.069	ENSMZEG00005004153	tdp2b	91	62.069	Maylandia_zebra
ENSTNIG00000010260	TDP2	99	57.471	ENSMZEG00005004103	tdp2b	86	57.471	Maylandia_zebra
ENSTNIG00000010260	TDP2	99	62.069	ENSMZEG00005004077	tdp2b	88	62.069	Maylandia_zebra
ENSTNIG00000010260	TDP2	96	60.870	ENSMZEG00005004055	tdp2b	83	60.870	Maylandia_zebra
ENSTNIG00000010260	TDP2	97	56.250	ENSMGAG00000008014	TDP2	68	56.250	Meleagris_gallopavo
ENSTNIG00000010260	TDP2	97	50.973	ENSMAUG00000014451	Tdp2	68	51.172	Mesocricetus_auratus
ENSTNIG00000010260	TDP2	98	53.462	ENSMICG00000000039	TDP2	87	53.462	Microcebus_murinus
ENSTNIG00000010260	TDP2	97	52.140	ENSMOCG00000002823	Tdp2	68	52.344	Microtus_ochrogaster
ENSTNIG00000010260	TDP2	83	54.128	ENSMODG00000011653	TDP2	66	53.636	Monodelphis_domestica
ENSTNIG00000010260	TDP2	96	64.683	ENSMALG00000005368	-	85	64.683	Monopterus_albus
ENSTNIG00000010260	TDP2	97	52.140	MGP_CAROLIEiJ_G0018354	Tdp2	68	52.344	Mus_caroli
ENSTNIG00000010260	TDP2	97	51.953	ENSMUSG00000035958	Tdp2	68	51.953	Mus_musculus
ENSTNIG00000010260	TDP2	97	50.000	MGP_PahariEiJ_G0019417	Tdp2	68	50.000	Mus_pahari
ENSTNIG00000010260	TDP2	97	51.172	MGP_SPRETEiJ_G0019220	Tdp2	67	51.172	Mus_spretus
ENSTNIG00000010260	TDP2	97	52.734	ENSMPUG00000004516	TDP2	70	52.734	Mustela_putorius_furo
ENSTNIG00000010260	TDP2	97	50.391	ENSMLUG00000013506	TDP2	70	50.391	Myotis_lucifugus
ENSTNIG00000010260	TDP2	97	51.765	ENSNGAG00000001375	Tdp2	68	51.765	Nannospalax_galili
ENSTNIG00000010260	TDP2	99	54.023	ENSNLEG00000002447	TDP2	80	54.023	Nomascus_leucogenys
ENSTNIG00000010260	TDP2	98	52.308	ENSOPRG00000016299	TDP2	72	52.308	Ochotona_princeps
ENSTNIG00000010260	TDP2	99	53.640	ENSODEG00000014018	TDP2	86	53.640	Octodon_degus
ENSTNIG00000010260	TDP2	99	52.107	ENSOCUG00000013773	TDP2	70	52.107	Oryctolagus_cuniculus
ENSTNIG00000010260	TDP2	99	64.231	ENSORLG00000001661	-	95	64.231	Oryzias_latipes
ENSTNIG00000010260	TDP2	99	64.231	ENSORLG00020004634	-	95	64.231	Oryzias_latipes_hni
ENSTNIG00000010260	TDP2	99	55.939	ENSORLG00015008190	-	94	55.939	Oryzias_latipes_hsok
ENSTNIG00000010260	TDP2	99	59.615	ENSOMEG00000015899	-	93	58.893	Oryzias_melastigma
ENSTNIG00000010260	TDP2	97	52.344	ENSOGAG00000025303	TDP2	69	52.344	Otolemur_garnettii
ENSTNIG00000010260	TDP2	99	54.023	ENSPPAG00000029023	TDP2	83	54.023	Pan_paniscus
ENSTNIG00000010260	TDP2	97	51.953	ENSPPRG00000015398	TDP2	70	51.953	Panthera_pardus
ENSTNIG00000010260	TDP2	97	51.953	ENSPTIG00000018574	TDP2	86	51.953	Panthera_tigris_altaica
ENSTNIG00000010260	TDP2	99	54.023	ENSPTRG00000017778	TDP2	83	54.023	Pan_troglodytes
ENSTNIG00000010260	TDP2	98	51.923	ENSPANG00000017590	TDP2	84	52.308	Papio_anubis
ENSTNIG00000010260	TDP2	99	57.634	ENSPKIG00000006483	tdp2b	70	57.634	Paramormyrops_kingsleyae
ENSTNIG00000010260	TDP2	97	53.906	ENSPSIG00000004948	TDP2	87	53.906	Pelodiscus_sinensis
ENSTNIG00000010260	TDP2	97	51.362	ENSPEMG00000001788	Tdp2	68	51.562	Peromyscus_maniculatus_bairdii
ENSTNIG00000010260	TDP2	97	43.123	ENSPMAG00000001570	tdp2b	97	43.866	Petromyzon_marinus
ENSTNIG00000010260	TDP2	97	51.362	ENSPCIG00000007316	TDP2	66	51.362	Phascolarctos_cinereus
ENSTNIG00000010260	TDP2	99	63.985	ENSPFOG00000017990	-	93	63.985	Poecilia_formosa
ENSTNIG00000010260	TDP2	98	64.615	ENSPLAG00000019439	-	81	64.615	Poecilia_latipinna
ENSTNIG00000010260	TDP2	97	63.780	ENSPMEG00000010824	-	85	63.780	Poecilia_mexicana
ENSTNIG00000010260	TDP2	99	53.640	ENSPPYG00000016282	TDP2	64	53.640	Pongo_abelii
ENSTNIG00000010260	TDP2	98	52.124	ENSPCOG00000021415	TDP2	89	52.124	Propithecus_coquereli
ENSTNIG00000010260	TDP2	67	57.143	ENSPNYG00000001944	-	70	58.140	Pundamilia_nyererei
ENSTNIG00000010260	TDP2	99	59.783	ENSPNYG00000011504	tdp2b	90	59.783	Pundamilia_nyererei
ENSTNIG00000010260	TDP2	99	60.536	ENSPNYG00000011532	tdp2b	71	60.536	Pundamilia_nyererei
ENSTNIG00000010260	TDP2	95	56.972	ENSPNAG00000022162	tdp2a	63	56.972	Pygocentrus_nattereri
ENSTNIG00000010260	TDP2	97	50.195	ENSRNOG00000018246	Tdp2	68	50.391	Rattus_norvegicus
ENSTNIG00000010260	TDP2	98	52.308	ENSRBIG00000037119	TDP2	84	52.308	Rhinopithecus_bieti
ENSTNIG00000010260	TDP2	98	52.308	ENSRROG00000005025	TDP2	84	52.308	Rhinopithecus_roxellana
ENSTNIG00000010260	TDP2	99	52.874	ENSSBOG00000028734	TDP2	83	52.874	Saimiri_boliviensis_boliviensis
ENSTNIG00000010260	TDP2	97	54.086	ENSSHAG00000002506	TDP2	68	54.086	Sarcophilus_harrisii
ENSTNIG00000010260	TDP2	98	51.163	ENSSFOG00015011322	-	71	50.775	Scleropages_formosus
ENSTNIG00000010260	TDP2	98	50.579	ENSSARG00000013547	TDP2	91	50.579	Sorex_araneus
ENSTNIG00000010260	TDP2	97	50.584	ENSSPUG00000008288	TDP2	69	50.584	Sphenodon_punctatus
ENSTNIG00000010260	TDP2	98	51.737	ENSSSCG00000001092	TDP2	70	51.953	Sus_scrofa
ENSTNIG00000010260	TDP2	98	52.326	ENSTGUG00000009035	TDP2	97	52.326	Taeniopygia_guttata
ENSTNIG00000010260	TDP2	99	81.679	ENSTRUG00000012218	-	91	81.679	Takifugu_rubripes
ENSTNIG00000010260	TDP2	99	61.154	ENSTRUG00000014347	tdp2b	71	61.154	Takifugu_rubripes
ENSTNIG00000010260	TDP2	98	53.668	ENSTTRG00000016376	TDP2	69	54.054	Tursiops_truncatus
ENSTNIG00000010260	TDP2	97	52.344	ENSUAMG00000025939	TDP2	73	52.344	Ursus_americanus
ENSTNIG00000010260	TDP2	97	52.344	ENSUMAG00000020111	TDP2	84	52.344	Ursus_maritimus
ENSTNIG00000010260	TDP2	97	51.373	ENSXETG00000014826	tdp2	67	51.373	Xenopus_tropicalis
ENSTNIG00000010260	TDP2	95	66.135	ENSXCOG00000010778	-	69	66.135	Xiphophorus_couchianus
ENSTNIG00000010260	TDP2	97	66.406	ENSXMAG00000022252	-	73	66.406	Xiphophorus_maculatus