EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000010325 (Gene tree)
Gene ID: -
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA-binding family member 3
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4775 bases
Position: chrUn_random:23524959-23529733
Accession: ZDB-GENE-030131-9808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013230	CPL	PF08144.11	5.5e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013422	-	1863	-	ENSTNIP00000013230	621 (aa)	-	H3CY95

Gene Model

Click here to download ENSTNIG00000010325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010325	pum3	94	59.762	ENSG00000080608	PUM3	90	59.760	Homo_sapiens
ENSTNIG00000010325	pum3	98	75.077	ENSAPOG00000020252	pum3	99	75.697	Acanthochromis_polyacanthus
ENSTNIG00000010325	pum3	97	59.375	ENSAMEG00000012187	PUM3	90	59.898	Ailuropoda_melanoleuca
ENSTNIG00000010325	pum3	86	78.439	ENSACIG00000009786	pum3	89	78.439	Amphilophus_citrinellus
ENSTNIG00000010325	pum3	98	75.077	ENSAOCG00000004439	pum3	99	75.697	Amphiprion_ocellaris
ENSTNIG00000010325	pum3	98	74.923	ENSAPEG00000020523	pum3	99	75.542	Amphiprion_percula
ENSTNIG00000010325	pum3	98	76.242	ENSATEG00000005799	pum3	99	77.019	Anabas_testudineus
ENSTNIG00000010325	pum3	98	58.576	ENSAPLG00000002920	PUM3	94	59.932	Anas_platyrhynchos
ENSTNIG00000010325	pum3	91	58.979	ENSACAG00000003174	PUM3	90	60.448	Anolis_carolinensis
ENSTNIG00000010325	pum3	98	58.226	ENSANAG00000024520	PUM3	90	59.794	Aotus_nancymaae
ENSTNIG00000010325	pum3	98	72.573	ENSACLG00000001017	pum3	99	72.265	Astatotilapia_calliptera
ENSTNIG00000010325	pum3	99	66.878	ENSAMXG00000020911	pum3	100	66.086	Astyanax_mexicanus
ENSTNIG00000010325	pum3	96	58.416	ENSBTAG00000013357	PUM3	86	60.357	Bos_taurus
ENSTNIG00000010325	pum3	81	31.202	WBGene00014165	puf-12	66	31.202	Caenorhabditis_elegans
ENSTNIG00000010325	pum3	98	58.265	ENSCJAG00000010917	PUM3	90	59.278	Callithrix_jacchus
ENSTNIG00000010325	pum3	98	57.955	ENSCAFG00000002035	PUM3	90	59.005	Canis_familiaris
ENSTNIG00000010325	pum3	98	57.955	ENSCAFG00020026867	PUM3	90	59.005	Canis_lupus_dingo
ENSTNIG00000010325	pum3	96	59.241	ENSCHIG00000021559	PUM3	86	61.250	Capra_hircus
ENSTNIG00000010325	pum3	99	57.711	ENSTSYG00000007481	PUM3	90	59.215	Carlito_syrichta
ENSTNIG00000010325	pum3	97	57.190	ENSCAPG00000010592	-	90	57.904	Cavia_aperea
ENSTNIG00000010325	pum3	96	59.167	ENSCPOG00000008552	-	90	59.450	Cavia_porcellus
ENSTNIG00000010325	pum3	98	58.497	ENSCCAG00000032650	PUM3	90	59.794	Cebus_capucinus
ENSTNIG00000010325	pum3	98	58.481	ENSCATG00000024880	PUM3	90	59.727	Cercocebus_atys
ENSTNIG00000010325	pum3	97	59.241	ENSCLAG00000011892	PUM3	90	59.760	Chinchilla_lanigera
ENSTNIG00000010325	pum3	98	58.481	ENSCSAG00000008691	PUM3	90	59.727	Chlorocebus_sabaeus
ENSTNIG00000010325	pum3	80	52.104	ENSCHOG00000002535	PUM3	73	52.104	Choloepus_hoffmanni
ENSTNIG00000010325	pum3	97	59.038	ENSCPBG00000025470	PUM3	85	60.839	Chrysemys_picta_bellii
ENSTNIG00000010325	pum3	84	39.493	ENSCING00000024199	-	98	39.493	Ciona_intestinalis
ENSTNIG00000010325	pum3	86	39.746	ENSCSAVG00000006072	-	98	39.848	Ciona_savignyi
ENSTNIG00000010325	pum3	98	58.805	ENSCANG00000006142	PUM3	90	60.068	Colobus_angolensis_palliatus
ENSTNIG00000010325	pum3	96	57.990	ENSCGRG00001016402	Pum3	86	60.568	Cricetulus_griseus_chok1gshd
ENSTNIG00000010325	pum3	96	57.990	ENSCGRG00000010207	Pum3	86	60.568	Cricetulus_griseus_crigri
ENSTNIG00000010325	pum3	87	71.902	ENSCSEG00000001565	pum3	99	73.077	Cynoglossus_semilaevis
ENSTNIG00000010325	pum3	76	70.070	ENSCVAG00000006550	pum3	99	70.423	Cyprinodon_variegatus
ENSTNIG00000010325	pum3	99	65.183	ENSDARG00000087779	pum3	100	65.183	Danio_rerio
ENSTNIG00000010325	pum3	98	50.729	ENSDNOG00000008157	PUM3	61	52.281	Dasypus_novemcinctus
ENSTNIG00000010325	pum3	85	61.027	ENSETEG00000015331	PUM3	82	61.049	Echinops_telfairi
ENSTNIG00000010325	pum3	83	41.165	ENSEBUG00000011586	pum3	78	41.321	Eptatretus_burgeri
ENSTNIG00000010325	pum3	98	58.699	ENSEASG00005010350	PUM3	90	59.794	Equus_asinus_asinus
ENSTNIG00000010325	pum3	98	58.699	ENSECAG00000017193	PUM3	90	59.794	Equus_caballus
ENSTNIG00000010325	pum3	90	52.273	ENSEEUG00000010314	PUM3	86	54.440	Erinaceus_europaeus
ENSTNIG00000010325	pum3	95	65.455	ENSELUG00000002215	pum3	87	68.093	Esox_lucius
ENSTNIG00000010325	pum3	99	58.842	ENSFALG00000010509	PUM3	90	60.794	Ficedula_albicollis
ENSTNIG00000010325	pum3	98	58.117	ENSFDAG00000021027	PUM3	90	59.520	Fukomys_damarensis
ENSTNIG00000010325	pum3	91	77.105	ENSFHEG00000015576	pum3	99	77.105	Fundulus_heteroclitus
ENSTNIG00000010325	pum3	86	72.128	ENSGMOG00000014217	pum3	99	72.128	Gadus_morhua
ENSTNIG00000010325	pum3	98	58.689	ENSGALG00000010178	PUM3	87	61.580	Gallus_gallus
ENSTNIG00000010325	pum3	57	76.796	ENSGAFG00000001930	pum3	62	76.796	Gambusia_affinis
ENSTNIG00000010325	pum3	86	82.991	ENSGACG00000017878	pum3	98	82.991	Gasterosteus_aculeatus
ENSTNIG00000010325	pum3	99	58.158	ENSGAGG00000018983	PUM3	92	60.627	Gopherus_agassizii
ENSTNIG00000010325	pum3	94	59.694	ENSGGOG00000006143	PUM3	90	59.589	Gorilla_gorilla
ENSTNIG00000010325	pum3	98	67.367	ENSHBUG00000012903	pum3	97	66.934	Haplochromis_burtoni
ENSTNIG00000010325	pum3	95	59.664	ENSHGLG00000015868	-	90	60.034	Heterocephalus_glaber_female
ENSTNIG00000010325	pum3	95	59.664	ENSHGLG00100018825	PUM3	90	60.034	Heterocephalus_glaber_male
ENSTNIG00000010325	pum3	98	70.934	ENSHCOG00000010306	pum3	99	70.633	Hippocampus_comes
ENSTNIG00000010325	pum3	99	64.976	ENSIPUG00000024801	pum3	100	65.032	Ictalurus_punctatus
ENSTNIG00000010325	pum3	98	58.199	ENSSTOG00000009586	PUM3	90	59.487	Ictidomys_tridecemlineatus
ENSTNIG00000010325	pum3	99	57.512	ENSJJAG00000012563	Pum3	89	59.036	Jaculus_jaculus
ENSTNIG00000010325	pum3	98	72.360	ENSKMAG00000010277	pum3	99	74.568	Kryptolebias_marmoratus
ENSTNIG00000010325	pum3	98	73.628	ENSLBEG00000012213	pum3	99	74.198	Labrus_bergylta
ENSTNIG00000010325	pum3	94	58.844	ENSLACG00000008312	PUM3	89	59.511	Latimeria_chalumnae
ENSTNIG00000010325	pum3	99	64.706	ENSLOCG00000012529	pum3	93	66.440	Lepisosteus_oculatus
ENSTNIG00000010325	pum3	98	57.980	ENSLAFG00000017341	PUM3	90	59.005	Loxodonta_africana
ENSTNIG00000010325	pum3	98	58.643	ENSMFAG00000001430	PUM3	90	59.898	Macaca_fascicularis
ENSTNIG00000010325	pum3	98	58.643	ENSMMUG00000002362	PUM3	89	59.898	Macaca_mulatta
ENSTNIG00000010325	pum3	98	58.643	ENSMNEG00000035288	PUM3	90	59.898	Macaca_nemestrina
ENSTNIG00000010325	pum3	98	58.320	ENSMLEG00000034820	PUM3	90	59.556	Mandrillus_leucophaeus
ENSTNIG00000010325	pum3	98	76.809	ENSMAMG00000022861	pum3	93	75.902	Mastacembelus_armatus
ENSTNIG00000010325	pum3	98	73.107	ENSMZEG00005014205	pum3	97	72.798	Maylandia_zebra
ENSTNIG00000010325	pum3	98	52.989	ENSMGAG00000002255	PUM3	90	55.447	Meleagris_gallopavo
ENSTNIG00000010325	pum3	99	57.166	ENSMAUG00000009733	Pum3	86	60.036	Mesocricetus_auratus
ENSTNIG00000010325	pum3	98	57.843	ENSMICG00000045916	PUM3	78	58.662	Microcebus_murinus
ENSTNIG00000010325	pum3	97	56.863	ENSMOCG00000014830	-	88	59.115	Microtus_ochrogaster
ENSTNIG00000010325	pum3	99	57.649	ENSMOCG00000019519	-	86	60.391	Microtus_ochrogaster
ENSTNIG00000010325	pum3	96	74.152	ENSMMOG00000012184	pum3	97	74.129	Mola_mola
ENSTNIG00000010325	pum3	90	59.464	ENSMODG00000015417	PUM3	78	59.537	Monodelphis_domestica
ENSTNIG00000010325	pum3	98	77.288	ENSMALG00000022164	pum3	92	76.651	Monopterus_albus
ENSTNIG00000010325	pum3	98	57.767	MGP_CAROLIEiJ_G0022845	Pum3	90	58.913	Mus_caroli
ENSTNIG00000010325	pum3	98	56.958	ENSMUSG00000041360	Pum3	90	58.092	Mus_musculus
ENSTNIG00000010325	pum3	98	57.073	MGP_PahariEiJ_G0014338	Pum3	90	58.076	Mus_pahari
ENSTNIG00000010325	pum3	98	56.958	MGP_SPRETEiJ_G0023763	Pum3	90	58.065	Mus_spretus
ENSTNIG00000010325	pum3	99	57.282	ENSMPUG00000005125	PUM3	90	58.319	Mustela_putorius_furo
ENSTNIG00000010325	pum3	98	57.674	ENSMLUG00000002309	PUM3	90	58.703	Myotis_lucifugus
ENSTNIG00000010325	pum3	83	61.004	ENSNGAG00000019468	Pum3	88	57.686	Nannospalax_galili
ENSTNIG00000010325	pum3	97	70.874	ENSNBRG00000021370	pum3	92	71.501	Neolamprologus_brichardi
ENSTNIG00000010325	pum3	98	58.824	ENSNLEG00000008712	PUM3	90	59.863	Nomascus_leucogenys
ENSTNIG00000010325	pum3	79	45.697	ENSMEUG00000013606	-	97	45.639	Notamacropus_eugenii
ENSTNIG00000010325	pum3	71	49.443	ENSOPRG00000004225	-	62	50.246	Ochotona_princeps
ENSTNIG00000010325	pum3	97	54.276	ENSODEG00000016477	-	89	54.872	Octodon_degus
ENSTNIG00000010325	pum3	97	59.669	ENSODEG00000003625	-	90	60.481	Octodon_degus
ENSTNIG00000010325	pum3	98	73.272	ENSONIG00000012733	pum3	99	72.965	Oreochromis_niloticus
ENSTNIG00000010325	pum3	84	59.656	ENSOANG00000014995	PUM3	98	59.551	Ornithorhynchus_anatinus
ENSTNIG00000010325	pum3	98	57.492	ENSOCUG00000026104	-	90	58.621	Oryctolagus_cuniculus
ENSTNIG00000010325	pum3	98	57.655	ENSOCUG00000004189	-	89	58.793	Oryctolagus_cuniculus
ENSTNIG00000010325	pum3	98	70.543	ENSORLG00000014935	pum3	99	70.698	Oryzias_latipes
ENSTNIG00000010325	pum3	98	70.078	ENSORLG00020002841	pum3	99	70.233	Oryzias_latipes_hni
ENSTNIG00000010325	pum3	98	70.388	ENSORLG00015015906	pum3	99	70.388	Oryzias_latipes_hsok
ENSTNIG00000010325	pum3	98	69.626	ENSOMEG00000009427	pum3	99	69.782	Oryzias_melastigma
ENSTNIG00000010325	pum3	98	58.862	ENSOGAG00000008125	-	90	60.720	Otolemur_garnettii
ENSTNIG00000010325	pum3	82	47.776	ENSOGAG00000033481	-	84	47.388	Otolemur_garnettii
ENSTNIG00000010325	pum3	96	58.911	ENSOARG00000013337	PUM3	86	61.210	Ovis_aries
ENSTNIG00000010325	pum3	98	58.564	ENSPPAG00000041337	PUM3	90	59.589	Pan_paniscus
ENSTNIG00000010325	pum3	98	58.929	ENSPPRG00000000809	PUM3	90	60.206	Panthera_pardus
ENSTNIG00000010325	pum3	98	59.253	ENSPTIG00000021934	PUM3	90	60.549	Panthera_tigris_altaica
ENSTNIG00000010325	pum3	94	59.762	ENSPTRG00000020735	PUM3	90	59.760	Pan_troglodytes
ENSTNIG00000010325	pum3	98	58.805	ENSPANG00000025118	PUM3	90	60.068	Papio_anubis
ENSTNIG00000010325	pum3	99	62.853	ENSPKIG00000022249	pum3	98	63.000	Paramormyrops_kingsleyae
ENSTNIG00000010325	pum3	99	57.488	ENSPSIG00000016272	PUM3	88	60.932	Pelodiscus_sinensis
ENSTNIG00000010325	pum3	79	75.407	ENSPMGG00000021261	pum3	99	75.407	Periophthalmus_magnuspinnatus
ENSTNIG00000010325	pum3	97	46.922	ENSPEMG00000019340	-	85	48.307	Peromyscus_maniculatus_bairdii
ENSTNIG00000010325	pum3	89	59.892	ENSPCIG00000030598	PUM3	75	59.892	Phascolarctos_cinereus
ENSTNIG00000010325	pum3	98	71.405	ENSPFOG00000001719	pum3	99	71.405	Poecilia_formosa
ENSTNIG00000010325	pum3	98	69.984	ENSPLAG00000020010	pum3	99	70.866	Poecilia_latipinna
ENSTNIG00000010325	pum3	98	70.079	ENSPMEG00000017451	pum3	99	70.394	Poecilia_mexicana
ENSTNIG00000010325	pum3	55	80.000	ENSPREG00000019478	-	68	80.000	Poecilia_reticulata
ENSTNIG00000010325	pum3	94	60.034	ENSPPYG00000019255	PUM3	90	60.034	Pongo_abelii
ENSTNIG00000010325	pum3	99	51.613	ENSPCAG00000005797	PUM3	86	53.072	Procavia_capensis
ENSTNIG00000010325	pum3	98	58.007	ENSPCOG00000027325	PUM3	90	58.834	Propithecus_coquereli
ENSTNIG00000010325	pum3	98	58.442	ENSPVAG00000016135	PUM3	82	61.319	Pteropus_vampyrus
ENSTNIG00000010325	pum3	98	72.643	ENSPNYG00000016124	pum3	99	72.334	Pundamilia_nyererei
ENSTNIG00000010325	pum3	99	62.540	ENSPNAG00000026524	pum3	94	65.042	Pygocentrus_nattereri
ENSTNIG00000010325	pum3	98	58.101	ENSRNOG00000048356	RGD1308750	90	58.935	Rattus_norvegicus
ENSTNIG00000010325	pum3	98	58.429	ENSRNOG00000012574	Pum3	90	59.278	Rattus_norvegicus
ENSTNIG00000010325	pum3	98	58.481	ENSRBIG00000036924	PUM3	90	59.727	Rhinopithecus_bieti
ENSTNIG00000010325	pum3	98	58.643	ENSRROG00000041089	PUM3	90	59.898	Rhinopithecus_roxellana
ENSTNIG00000010325	pum3	98	58.374	ENSSBOG00000028066	PUM3	90	59.622	Saimiri_boliviensis_boliviensis
ENSTNIG00000010325	pum3	85	61.553	ENSSHAG00000003730	PUM3	86	59.715	Sarcophilus_harrisii
ENSTNIG00000010325	pum3	96	64.390	ENSSFOG00015018778	pum3	85	68.681	Scleropages_formosus
ENSTNIG00000010325	pum3	99	73.507	ENSSMAG00000013236	pum3	99	75.697	Scophthalmus_maximus
ENSTNIG00000010325	pum3	99	75.415	ENSSDUG00000001887	pum3	99	76.586	Seriola_dumerili
ENSTNIG00000010325	pum3	99	76.183	ENSSLDG00000015766	pum3	99	77.217	Seriola_lalandi_dorsalis
ENSTNIG00000010325	pum3	96	54.651	ENSSARG00000000579	PUM3	94	56.454	Sorex_araneus
ENSTNIG00000010325	pum3	97	57.800	ENSSPUG00000001707	PUM3	91	59.240	Sphenodon_punctatus
ENSTNIG00000010325	pum3	98	74.571	ENSSPAG00000003976	pum3	99	74.727	Stegastes_partitus
ENSTNIG00000010325	pum3	96	59.635	ENSSSCG00000005227	PUM3	90	59.622	Sus_scrofa
ENSTNIG00000010325	pum3	96	57.257	ENSTGUG00000005339	PUM3	97	57.792	Taeniopygia_guttata
ENSTNIG00000010325	pum3	99	81.915	ENSTRUG00000004074	pum3	99	81.915	Takifugu_rubripes
ENSTNIG00000010325	pum3	84	46.374	ENSTBEG00000013058	PUM3	82	46.355	Tupaia_belangeri
ENSTNIG00000010325	pum3	96	52.970	ENSTTRG00000001062	PUM3	86	53.093	Tursiops_truncatus
ENSTNIG00000010325	pum3	98	53.150	ENSUMAG00000018443	PUM3	99	59.363	Ursus_maritimus
ENSTNIG00000010325	pum3	96	58.581	ENSVPAG00000010766	PUM3	89	59.247	Vicugna_pacos
ENSTNIG00000010325	pum3	98	57.955	ENSVVUG00000006527	PUM3	90	59.005	Vulpes_vulpes
ENSTNIG00000010325	pum3	97	50.248	ENSXETG00000011707	pum3	93	49.423	Xenopus_tropicalis
ENSTNIG00000010325	pum3	94	69.514	ENSXCOG00000006725	pum3	99	69.374	Xiphophorus_couchianus
ENSTNIG00000010325	pum3	98	70.032	ENSXMAG00000002926	pum3	93	71.838	Xiphophorus_maculatus