EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000010362 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm1
Alias: WITHDRAWN: wu:fj35h04|fj35h04|fk85b04|id:ibd5043|sb:eu460|si:ch73-60i13.2|wu:fj35h04|wu:fk85b04
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 29916 bases
Position: chr3:4155347-4185262
Accession: ZDB-GENE-030131-7119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013268	R3H	PF01424.22	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013460	-	3163	-	ENSTNIP00000013268	954 (aa)	-	H3CYD3

Gene Model

Click here to download ENSTNIG00000010362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010362's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010362	r3hdm1	95	46.519	ENSG00000048991	R3HDM1	94	61.842	Homo_sapiens
ENSTNIG00000010362	r3hdm1	99	70.841	ENSAPOG00000020850	r3hdm1	95	70.459	Acanthochromis_polyacanthus
ENSTNIG00000010362	r3hdm1	95	46.885	ENSAMEG00000014886	R3HDM1	83	46.826	Ailuropoda_melanoleuca
ENSTNIG00000010362	r3hdm1	99	71.085	ENSAOCG00000005192	r3hdm1	98	70.797	Amphiprion_ocellaris
ENSTNIG00000010362	r3hdm1	99	70.729	ENSAPEG00000016108	r3hdm1	98	70.430	Amphiprion_percula
ENSTNIG00000010362	r3hdm1	99	70.191	ENSATEG00000000232	r3hdm1	98	69.789	Anabas_testudineus
ENSTNIG00000010362	r3hdm1	99	46.240	ENSAPLG00000015231	R3HDM1	87	46.497	Anas_platyrhynchos
ENSTNIG00000010362	r3hdm1	99	44.615	ENSACAG00000001676	R3HDM1	88	45.472	Anolis_carolinensis
ENSTNIG00000010362	r3hdm1	95	45.625	ENSANAG00000035334	R3HDM1	82	67.732	Aotus_nancymaae
ENSTNIG00000010362	r3hdm1	98	69.309	ENSACLG00000027282	r3hdm1	97	69.207	Astatotilapia_calliptera
ENSTNIG00000010362	r3hdm1	90	64.524	ENSAMXG00000012861	R3HDM1	87	50.918	Astyanax_mexicanus
ENSTNIG00000010362	r3hdm1	98	48.624	ENSAMXG00000003536	r3hdm1	85	49.082	Astyanax_mexicanus
ENSTNIG00000010362	r3hdm1	95	45.343	ENSBTAG00000013302	R3HDM1	87	44.693	Bos_taurus
ENSTNIG00000010362	r3hdm1	95	45.616	ENSCJAG00000011718	R3HDM1	82	67.732	Callithrix_jacchus
ENSTNIG00000010362	r3hdm1	95	46.885	ENSCAFG00000005075	R3HDM1	83	47.182	Canis_familiaris
ENSTNIG00000010362	r3hdm1	95	46.885	ENSCAFG00020016119	R3HDM1	80	59.695	Canis_lupus_dingo
ENSTNIG00000010362	r3hdm1	95	46.865	ENSCHIG00000020851	R3HDM1	86	46.115	Capra_hircus
ENSTNIG00000010362	r3hdm1	95	44.139	ENSCPOG00000012784	R3HDM1	80	66.946	Cavia_porcellus
ENSTNIG00000010362	r3hdm1	95	45.464	ENSCCAG00000027199	R3HDM1	82	67.412	Cebus_capucinus
ENSTNIG00000010362	r3hdm1	99	45.274	ENSCATG00000023642	R3HDM1	87	45.867	Cercocebus_atys
ENSTNIG00000010362	r3hdm1	94	45.791	ENSCLAG00000007962	R3HDM1	80	70.293	Chinchilla_lanigera
ENSTNIG00000010362	r3hdm1	95	44.694	ENSCSAG00000016356	R3HDM1	87	44.390	Chlorocebus_sabaeus
ENSTNIG00000010362	r3hdm1	88	47.532	ENSCPBG00000009645	R3HDM1	88	47.592	Chrysemys_picta_bellii
ENSTNIG00000010362	r3hdm1	99	45.775	ENSCANG00000034748	R3HDM1	87	46.123	Colobus_angolensis_palliatus
ENSTNIG00000010362	r3hdm1	95	44.807	ENSCGRG00001012357	R3hdm1	84	44.401	Cricetulus_griseus_chok1gshd
ENSTNIG00000010362	r3hdm1	95	46.259	ENSCGRG00000012080	R3hdm1	89	65.926	Cricetulus_griseus_crigri
ENSTNIG00000010362	r3hdm1	99	61.690	ENSCSEG00000008944	r3hdm1	97	62.414	Cynoglossus_semilaevis
ENSTNIG00000010362	r3hdm1	99	67.535	ENSCVAG00000007582	r3hdm1	98	67.335	Cyprinodon_variegatus
ENSTNIG00000010362	r3hdm1	95	45.675	ENSDNOG00000000771	R3HDM1	86	44.668	Dasypus_novemcinctus
ENSTNIG00000010362	r3hdm1	77	60.277	ENSETEG00000013606	R3HDM1	83	43.606	Echinops_telfairi
ENSTNIG00000010362	r3hdm1	95	46.872	ENSEASG00005007392	R3HDM1	86	46.014	Equus_asinus_asinus
ENSTNIG00000010362	r3hdm1	99	44.838	ENSECAG00000019114	R3HDM1	86	46.123	Equus_caballus
ENSTNIG00000010362	r3hdm1	96	47.284	ENSELUG00000004909	R3HDM1	86	47.961	Esox_lucius
ENSTNIG00000010362	r3hdm1	87	48.326	ENSELUG00000014413	r3hdm1	83	49.329	Esox_lucius
ENSTNIG00000010362	r3hdm1	95	47.190	ENSFCAG00000027113	R3HDM1	84	47.265	Felis_catus
ENSTNIG00000010362	r3hdm1	81	47.456	ENSFALG00000013731	R3HDM1	88	42.272	Ficedula_albicollis
ENSTNIG00000010362	r3hdm1	95	45.066	ENSFDAG00000016478	R3HDM1	80	70.588	Fukomys_damarensis
ENSTNIG00000010362	r3hdm1	99	65.474	ENSFHEG00000018713	r3hdm1	98	65.184	Fundulus_heteroclitus
ENSTNIG00000010362	r3hdm1	66	58.686	ENSGMOG00000006042	-	80	54.083	Gadus_morhua
ENSTNIG00000010362	r3hdm1	84	65.033	ENSGALG00000012246	R3HDM1	85	64.052	Gallus_gallus
ENSTNIG00000010362	r3hdm1	99	65.152	ENSGAFG00000006203	r3hdm1	98	65.253	Gambusia_affinis
ENSTNIG00000010362	r3hdm1	95	69.269	ENSGACG00000014925	r3hdm1	96	69.169	Gasterosteus_aculeatus
ENSTNIG00000010362	r3hdm1	99	46.334	ENSGAGG00000007840	R3HDM1	86	46.389	Gopherus_agassizii
ENSTNIG00000010362	r3hdm1	99	46.123	ENSGGOG00000008156	R3HDM1	96	46.978	Gorilla_gorilla
ENSTNIG00000010362	r3hdm1	55	79.502	ENSHBUG00000015737	R3HDM1	91	79.502	Haplochromis_burtoni
ENSTNIG00000010362	r3hdm1	95	45.445	ENSHGLG00000015718	R3HDM1	93	59.579	Heterocephalus_glaber_female
ENSTNIG00000010362	r3hdm1	95	45.445	ENSHGLG00100003184	-	93	59.579	Heterocephalus_glaber_male
ENSTNIG00000010362	r3hdm1	89	40.314	ENSHGLG00100015374	-	85	40.724	Heterocephalus_glaber_male
ENSTNIG00000010362	r3hdm1	91	61.957	ENSHCOG00000013366	r3hdm1	88	73.123	Hippocampus_comes
ENSTNIG00000010362	r3hdm1	86	64.932	ENSIPUG00000001676	R3HDM1	94	65.254	Ictalurus_punctatus
ENSTNIG00000010362	r3hdm1	83	65.517	ENSIPUG00000013629	r3hdm1	82	66.019	Ictalurus_punctatus
ENSTNIG00000010362	r3hdm1	95	46.463	ENSSTOG00000007572	R3HDM1	89	65.185	Ictidomys_tridecemlineatus
ENSTNIG00000010362	r3hdm1	96	48.004	ENSLACG00000005334	R3HDM1	88	48.069	Latimeria_chalumnae
ENSTNIG00000010362	r3hdm1	99	49.036	ENSLOCG00000001641	r3hdm1	87	49.848	Lepisosteus_oculatus
ENSTNIG00000010362	r3hdm1	95	45.204	ENSLAFG00000009065	R3HDM1	84	45.317	Loxodonta_africana
ENSTNIG00000010362	r3hdm1	99	45.473	ENSMFAG00000030331	R3HDM1	87	46.069	Macaca_fascicularis
ENSTNIG00000010362	r3hdm1	95	45.777	ENSMMUG00000009844	R3HDM1	82	67.732	Macaca_mulatta
ENSTNIG00000010362	r3hdm1	99	45.572	ENSMNEG00000027793	R3HDM1	86	62.051	Macaca_nemestrina
ENSTNIG00000010362	r3hdm1	99	45.473	ENSMLEG00000043189	R3HDM1	87	46.069	Mandrillus_leucophaeus
ENSTNIG00000010362	r3hdm1	99	72.636	ENSMAMG00000004532	r3hdm1	98	72.189	Mastacembelus_armatus
ENSTNIG00000010362	r3hdm1	98	72.284	ENSMZEG00005003157	r3hdm1	97	72.183	Maylandia_zebra
ENSTNIG00000010362	r3hdm1	99	46.374	ENSMGAG00000012461	R3HDM1	86	46.837	Meleagris_gallopavo
ENSTNIG00000010362	r3hdm1	95	44.919	ENSMAUG00000010315	R3hdm1	89	65.926	Mesocricetus_auratus
ENSTNIG00000010362	r3hdm1	95	46.583	ENSMICG00000005900	-	81	67.732	Microcebus_murinus
ENSTNIG00000010362	r3hdm1	95	44.221	ENSMODG00000000923	R3HDM1	90	44.478	Monodelphis_domestica
ENSTNIG00000010362	r3hdm1	99	71.903	ENSMALG00000009000	r3hdm1	88	71.601	Monopterus_albus
ENSTNIG00000010362	r3hdm1	99	44.293	MGP_CAROLIEiJ_G0014543	R3hdm1	89	65.926	Mus_caroli
ENSTNIG00000010362	r3hdm1	99	44.000	ENSMUSG00000056211	R3hdm1	89	65.926	Mus_musculus
ENSTNIG00000010362	r3hdm1	99	43.774	MGP_PahariEiJ_G0027779	R3hdm1	88	65.556	Mus_pahari
ENSTNIG00000010362	r3hdm1	99	44.000	MGP_SPRETEiJ_G0015350	R3hdm1	89	65.926	Mus_spretus
ENSTNIG00000010362	r3hdm1	94	47.290	ENSMPUG00000002412	R3HDM1	83	47.225	Mustela_putorius_furo
ENSTNIG00000010362	r3hdm1	99	46.185	ENSMLUG00000013824	R3HDM1	87	46.386	Myotis_lucifugus
ENSTNIG00000010362	r3hdm1	99	45.274	ENSNLEG00000008622	R3HDM1	82	67.412	Nomascus_leucogenys
ENSTNIG00000010362	r3hdm1	88	43.922	ENSMEUG00000011784	R3HDM1	86	44.338	Notamacropus_eugenii
ENSTNIG00000010362	r3hdm1	95	45.171	ENSODEG00000008607	R3HDM1	80	70.711	Octodon_degus
ENSTNIG00000010362	r3hdm1	96	70.945	ENSONIG00000012017	r3hdm1	90	70.329	Oreochromis_niloticus
ENSTNIG00000010362	r3hdm1	95	43.971	ENSOANG00000007987	R3HDM1	83	46.324	Ornithorhynchus_anatinus
ENSTNIG00000010362	r3hdm1	95	46.463	ENSOCUG00000017366	R3HDM1	95	46.324	Oryctolagus_cuniculus
ENSTNIG00000010362	r3hdm1	99	62.574	ENSORLG00000004297	r3hdm1	98	63.088	Oryzias_latipes
ENSTNIG00000010362	r3hdm1	99	64.431	ENSORLG00015017355	r3hdm1	98	65.041	Oryzias_latipes_hsok
ENSTNIG00000010362	r3hdm1	55	72.571	ENSOMEG00000003882	-	94	72.624	Oryzias_melastigma
ENSTNIG00000010362	r3hdm1	95	46.292	ENSOGAG00000003136	R3HDM1	87	46.224	Otolemur_garnettii
ENSTNIG00000010362	r3hdm1	95	46.915	ENSOARG00000010788	R3HDM1	86	46.162	Ovis_aries
ENSTNIG00000010362	r3hdm1	99	45.884	ENSPPAG00000027858	R3HDM1	82	67.732	Pan_paniscus
ENSTNIG00000010362	r3hdm1	95	47.084	ENSPPRG00000002626	R3HDM1	84	47.155	Panthera_pardus
ENSTNIG00000010362	r3hdm1	95	47.190	ENSPTIG00000016581	R3HDM1	84	47.265	Panthera_tigris_altaica
ENSTNIG00000010362	r3hdm1	99	45.884	ENSPTRG00000012494	R3HDM1	82	67.732	Pan_troglodytes
ENSTNIG00000010362	r3hdm1	99	45.473	ENSPANG00000026448	R3HDM1	87	46.069	Papio_anubis
ENSTNIG00000010362	r3hdm1	86	71.154	ENSPKIG00000004328	r3hdm1	78	70.192	Paramormyrops_kingsleyae
ENSTNIG00000010362	r3hdm1	99	45.808	ENSPSIG00000012915	R3HDM1	86	46.599	Pelodiscus_sinensis
ENSTNIG00000010362	r3hdm1	99	44.163	ENSPEMG00000015187	R3hdm1	89	65.926	Peromyscus_maniculatus_bairdii
ENSTNIG00000010362	r3hdm1	100	45.083	ENSPCIG00000002491	R3HDM1	88	44.737	Phascolarctos_cinereus
ENSTNIG00000010362	r3hdm1	99	66.021	ENSPFOG00000015036	r3hdm1	98	65.828	Poecilia_formosa
ENSTNIG00000010362	r3hdm1	99	65.827	ENSPLAG00000018042	r3hdm1	98	65.625	Poecilia_latipinna
ENSTNIG00000010362	r3hdm1	99	66.129	ENSPMEG00000023947	r3hdm1	98	65.927	Poecilia_mexicana
ENSTNIG00000010362	r3hdm1	99	68.485	ENSPREG00000007902	r3hdm1	94	74.945	Poecilia_reticulata
ENSTNIG00000010362	r3hdm1	95	45.057	ENSPPYG00000012815	R3HDM1	87	45.363	Pongo_abelii
ENSTNIG00000010362	r3hdm1	82	65.649	ENSPCAG00000006208	R3HDM1	72	65.328	Procavia_capensis
ENSTNIG00000010362	r3hdm1	95	45.090	ENSPCOG00000012698	R3HDM1	80	70.714	Propithecus_coquereli
ENSTNIG00000010362	r3hdm1	95	41.288	ENSPVAG00000006098	R3HDM1	87	41.028	Pteropus_vampyrus
ENSTNIG00000010362	r3hdm1	83	68.438	ENSPNAG00000005436	R3HDM1	87	69.032	Pygocentrus_nattereri
ENSTNIG00000010362	r3hdm1	86	64.175	ENSPNAG00000013952	r3hdm1	84	64.644	Pygocentrus_nattereri
ENSTNIG00000010362	r3hdm1	99	44.086	ENSRNOG00000004099	R3hdm1	87	44.575	Rattus_norvegicus
ENSTNIG00000010362	r3hdm1	99	44.724	ENSRBIG00000033317	R3HDM1	87	70.819	Rhinopithecus_bieti
ENSTNIG00000010362	r3hdm1	99	45.573	ENSRROG00000034534	R3HDM1	82	67.732	Rhinopithecus_roxellana
ENSTNIG00000010362	r3hdm1	95	45.881	ENSSBOG00000020389	R3HDM1	82	67.732	Saimiri_boliviensis_boliviensis
ENSTNIG00000010362	r3hdm1	95	47.548	ENSSHAG00000016999	R3HDM1	83	47.252	Sarcophilus_harrisii
ENSTNIG00000010362	r3hdm1	95	52.248	ENSSFOG00015014134	r3hdm1	85	51.360	Scleropages_formosus
ENSTNIG00000010362	r3hdm1	98	46.869	ENSSFOG00015019851	-	91	47.830	Scleropages_formosus
ENSTNIG00000010362	r3hdm1	99	69.442	ENSSMAG00000001669	r3hdm1	89	68.297	Scophthalmus_maximus
ENSTNIG00000010362	r3hdm1	98	71.940	ENSSDUG00000010749	r3hdm1	97	71.841	Seriola_dumerili
ENSTNIG00000010362	r3hdm1	99	73.400	ENSSLDG00000004499	r3hdm1	88	73.300	Seriola_lalandi_dorsalis
ENSTNIG00000010362	r3hdm1	99	46.505	ENSSPUG00000004167	R3HDM1	86	47.299	Sphenodon_punctatus
ENSTNIG00000010362	r3hdm1	99	73.393	ENSSPAG00000004648	r3hdm1	98	72.997	Stegastes_partitus
ENSTNIG00000010362	r3hdm1	82	64.725	ENSSSCG00000015692	R3HDM1	86	46.403	Sus_scrofa
ENSTNIG00000010362	r3hdm1	94	46.383	ENSTGUG00000011750	R3HDM1	87	45.761	Taeniopygia_guttata
ENSTNIG00000010362	r3hdm1	99	76.412	ENSTRUG00000011654	r3hdm1	97	76.653	Takifugu_rubripes
ENSTNIG00000010362	r3hdm1	79	48.920	ENSTTRG00000003935	R3HDM1	69	48.793	Tursiops_truncatus
ENSTNIG00000010362	r3hdm1	72	51.034	ENSUAMG00000024806	R3HDM1	83	67.412	Ursus_americanus
ENSTNIG00000010362	r3hdm1	92	47.097	ENSUMAG00000005552	R3HDM1	83	46.834	Ursus_maritimus
ENSTNIG00000010362	r3hdm1	84	47.545	ENSVPAG00000007333	R3HDM1	74	47.331	Vicugna_pacos
ENSTNIG00000010362	r3hdm1	96	45.178	ENSVVUG00000006457	R3HDM1	83	47.155	Vulpes_vulpes
ENSTNIG00000010362	r3hdm1	91	43.568	ENSXETG00000019330	r3hdm1	96	42.901	Xenopus_tropicalis
ENSTNIG00000010362	r3hdm1	73	64.825	ENSXCOG00000017448	r3hdm1	92	65.499	Xiphophorus_couchianus
ENSTNIG00000010362	r3hdm1	99	64.487	ENSXMAG00000007885	r3hdm1	98	65.146	Xiphophorus_maculatus