EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000010484 (Gene tree)
Gene ID: -
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3152 bases
Position: chr19:5909274-5912425
Accession: ZDB-GENE-050522-540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013393	tRNA_Me_trans	PF03054.16	3.5e-134	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013587	-	1269	-	ENSTNIP00000013393	423 (aa)	-	H3CYQ8

Gene Model

Click here to download ENSTNIG00000010484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010484	trmu	100	69.340	ENSG00000100416	TRMU	96	78.395	Homo_sapiens
ENSTNIG00000010484	trmu	98	86.124	ENSAPOG00000014458	trmu	99	86.124	Acanthochromis_polyacanthus
ENSTNIG00000010484	trmu	95	71.072	ENSAMEG00000003319	TRMU	96	71.072	Ailuropoda_melanoleuca
ENSTNIG00000010484	trmu	98	83.133	ENSACIG00000002101	trmu	99	83.133	Amphilophus_citrinellus
ENSTNIG00000010484	trmu	98	86.298	ENSAOCG00000013155	trmu	99	86.298	Amphiprion_ocellaris
ENSTNIG00000010484	trmu	98	86.058	ENSAPEG00000013350	trmu	99	86.058	Amphiprion_percula
ENSTNIG00000010484	trmu	98	84.337	ENSATEG00000007814	trmu	99	84.337	Anabas_testudineus
ENSTNIG00000010484	trmu	89	72.487	ENSAPLG00000016380	TRMU	96	72.487	Anas_platyrhynchos
ENSTNIG00000010484	trmu	94	73.300	ENSACAG00000007720	TRMU	95	73.300	Anolis_carolinensis
ENSTNIG00000010484	trmu	96	71.358	ENSANAG00000038053	TRMU	95	71.358	Aotus_nancymaae
ENSTNIG00000010484	trmu	98	84.337	ENSACLG00000005395	trmu	99	84.337	Astatotilapia_calliptera
ENSTNIG00000010484	trmu	97	76.886	ENSAMXG00000005282	trmu	99	76.886	Astyanax_mexicanus
ENSTNIG00000010484	trmu	98	70.531	ENSBTAG00000005595	TRMU	99	70.531	Bos_taurus
ENSTNIG00000010484	trmu	90	41.026	WBGene00007114	mttu-1	98	41.026	Caenorhabditis_elegans
ENSTNIG00000010484	trmu	99	68.333	ENSCJAG00000000198	TRMU	99	68.333	Callithrix_jacchus
ENSTNIG00000010484	trmu	95	70.823	ENSCAFG00000000779	TRMU	94	70.823	Canis_familiaris
ENSTNIG00000010484	trmu	95	70.823	ENSCAFG00020009184	TRMU	94	70.823	Canis_lupus_dingo
ENSTNIG00000010484	trmu	98	70.290	ENSCHIG00000017074	TRMU	99	70.290	Capra_hircus
ENSTNIG00000010484	trmu	95	72.070	ENSTSYG00000003853	TRMU	95	72.070	Carlito_syrichta
ENSTNIG00000010484	trmu	92	68.215	ENSCAPG00000013034	TRMU	96	68.215	Cavia_aperea
ENSTNIG00000010484	trmu	96	72.346	ENSCPOG00000020780	TRMU	96	72.346	Cavia_porcellus
ENSTNIG00000010484	trmu	96	70.617	ENSCCAG00000021641	TRMU	96	70.617	Cebus_capucinus
ENSTNIG00000010484	trmu	95	70.050	ENSCATG00000032800	TRMU	95	70.050	Cercocebus_atys
ENSTNIG00000010484	trmu	98	70.673	ENSCLAG00000017269	TRMU	98	70.673	Chinchilla_lanigera
ENSTNIG00000010484	trmu	96	70.370	ENSCSAG00000005279	TRMU	96	70.370	Chlorocebus_sabaeus
ENSTNIG00000010484	trmu	88	73.797	ENSCPBG00000011621	TRMU	93	73.797	Chrysemys_picta_bellii
ENSTNIG00000010484	trmu	93	48.985	ENSCING00000019371	-	96	48.985	Ciona_intestinalis
ENSTNIG00000010484	trmu	96	70.370	ENSCANG00000041645	TRMU	96	70.370	Colobus_angolensis_palliatus
ENSTNIG00000010484	trmu	96	70.864	ENSCGRG00001001739	Trmu	96	70.864	Cricetulus_griseus_chok1gshd
ENSTNIG00000010484	trmu	96	65.679	ENSCGRG00000002781	Trmu	96	65.679	Cricetulus_griseus_crigri
ENSTNIG00000010484	trmu	99	78.282	ENSCSEG00000012382	trmu	99	78.282	Cynoglossus_semilaevis
ENSTNIG00000010484	trmu	98	83.213	ENSCVAG00000001366	trmu	99	83.213	Cyprinodon_variegatus
ENSTNIG00000010484	trmu	98	73.012	ENSDARG00000043734	trmu	99	73.012	Danio_rerio
ENSTNIG00000010484	trmu	63	56.554	ENSDNOG00000047245	-	94	56.134	Dasypus_novemcinctus
ENSTNIG00000010484	trmu	95	73.566	ENSDORG00000007455	Trmu	97	73.566	Dipodomys_ordii
ENSTNIG00000010484	trmu	91	44.703	FBgn0040337	CG3021	95	44.703	Drosophila_melanogaster
ENSTNIG00000010484	trmu	92	56.962	ENSEBUG00000007454	trmu	99	56.196	Eptatretus_burgeri
ENSTNIG00000010484	trmu	95	71.820	ENSEASG00005021725	TRMU	95	71.820	Equus_asinus_asinus
ENSTNIG00000010484	trmu	95	71.820	ENSECAG00000000467	TRMU	95	71.820	Equus_caballus
ENSTNIG00000010484	trmu	67	55.986	ENSEEUG00000000074	-	68	55.986	Erinaceus_europaeus
ENSTNIG00000010484	trmu	97	77.482	ENSELUG00000009464	trmu	99	79.245	Esox_lucius
ENSTNIG00000010484	trmu	95	71.571	ENSFCAG00000006533	TRMU	95	71.571	Felis_catus
ENSTNIG00000010484	trmu	88	71.728	ENSFALG00000010035	TRMU	96	71.728	Ficedula_albicollis
ENSTNIG00000010484	trmu	91	68.557	ENSFDAG00000017472	TRMU	98	68.557	Fukomys_damarensis
ENSTNIG00000010484	trmu	98	84.173	ENSFHEG00000003162	trmu	98	85.908	Fundulus_heteroclitus
ENSTNIG00000010484	trmu	96	72.236	ENSGMOG00000001323	trmu	100	72.236	Gadus_morhua
ENSTNIG00000010484	trmu	94	71.852	ENSGALG00000031922	TRMU	95	71.852	Gallus_gallus
ENSTNIG00000010484	trmu	99	83.571	ENSGAFG00000013331	trmu	99	83.571	Gambusia_affinis
ENSTNIG00000010484	trmu	98	81.754	ENSGACG00000019024	trmu	99	81.754	Gasterosteus_aculeatus
ENSTNIG00000010484	trmu	100	69.340	ENSGGOG00000000203	TRMU	100	69.340	Gorilla_gorilla
ENSTNIG00000010484	trmu	98	83.855	ENSHBUG00000023421	trmu	99	83.855	Haplochromis_burtoni
ENSTNIG00000010484	trmu	95	70.050	ENSHGLG00000009278	TRMU	95	70.050	Heterocephalus_glaber_female
ENSTNIG00000010484	trmu	95	70.050	ENSHGLG00100018863	TRMU	95	70.050	Heterocephalus_glaber_male
ENSTNIG00000010484	trmu	99	82.775	ENSHCOG00000013459	trmu	100	82.775	Hippocampus_comes
ENSTNIG00000010484	trmu	98	78.657	ENSIPUG00000009785	trmu	99	78.657	Ictalurus_punctatus
ENSTNIG00000010484	trmu	95	71.820	ENSSTOG00000010993	TRMU	95	71.820	Ictidomys_tridecemlineatus
ENSTNIG00000010484	trmu	95	70.050	ENSJJAG00000000667	Trmu	96	70.050	Jaculus_jaculus
ENSTNIG00000010484	trmu	98	82.734	ENSKMAG00000008516	trmu	99	82.734	Kryptolebias_marmoratus
ENSTNIG00000010484	trmu	98	84.173	ENSLBEG00000018831	trmu	99	84.173	Labrus_bergylta
ENSTNIG00000010484	trmu	97	74.092	ENSLACG00000013713	TRMU	98	74.092	Latimeria_chalumnae
ENSTNIG00000010484	trmu	98	76.202	ENSLOCG00000016066	trmu	99	76.202	Lepisosteus_oculatus
ENSTNIG00000010484	trmu	95	63.457	ENSLAFG00000005129	TRMU	96	63.457	Loxodonta_africana
ENSTNIG00000010484	trmu	96	70.370	ENSMFAG00000039767	TRMU	96	70.370	Macaca_fascicularis
ENSTNIG00000010484	trmu	96	70.370	ENSMMUG00000000807	TRMU	96	70.370	Macaca_mulatta
ENSTNIG00000010484	trmu	96	70.370	ENSMNEG00000028164	TRMU	96	70.370	Macaca_nemestrina
ENSTNIG00000010484	trmu	95	70.050	ENSMLEG00000033884	TRMU	95	70.050	Mandrillus_leucophaeus
ENSTNIG00000010484	trmu	98	83.133	ENSMAMG00000004717	trmu	99	83.133	Mastacembelus_armatus
ENSTNIG00000010484	trmu	98	84.337	ENSMZEG00005015797	trmu	99	84.337	Maylandia_zebra
ENSTNIG00000010484	trmu	75	71.037	ENSMGAG00000007550	TRMU	95	71.037	Meleagris_gallopavo
ENSTNIG00000010484	trmu	95	71.072	ENSMAUG00000022282	Trmu	96	71.072	Mesocricetus_auratus
ENSTNIG00000010484	trmu	95	71.072	ENSMICG00000029046	TRMU	97	71.072	Microcebus_murinus
ENSTNIG00000010484	trmu	97	69.734	ENSMOCG00000014641	Trmu	99	69.734	Microtus_ochrogaster
ENSTNIG00000010484	trmu	98	83.693	ENSMMOG00000007229	trmu	99	83.693	Mola_mola
ENSTNIG00000010484	trmu	96	66.259	ENSMODG00000007433	TRMU	95	66.259	Monodelphis_domestica
ENSTNIG00000010484	trmu	98	82.494	ENSMALG00000007721	trmu	99	82.494	Monopterus_albus
ENSTNIG00000010484	trmu	97	69.734	MGP_CAROLIEiJ_G0020134	Trmu	99	69.734	Mus_caroli
ENSTNIG00000010484	trmu	96	70.617	ENSMUSG00000022386	Trmu	97	70.617	Mus_musculus
ENSTNIG00000010484	trmu	96	70.123	MGP_PahariEiJ_G0020139	Trmu	83	84.146	Mus_pahari
ENSTNIG00000010484	trmu	96	70.617	MGP_SPRETEiJ_G0021031	Trmu	97	70.617	Mus_spretus
ENSTNIG00000010484	trmu	95	70.574	ENSMPUG00000002523	TRMU	95	70.574	Mustela_putorius_furo
ENSTNIG00000010484	trmu	96	72.346	ENSNGAG00000005132	Trmu	97	72.346	Nannospalax_galili
ENSTNIG00000010484	trmu	98	83.855	ENSNBRG00000022690	trmu	99	84.236	Neolamprologus_brichardi
ENSTNIG00000010484	trmu	100	68.632	ENSNLEG00000015773	TRMU	100	68.632	Nomascus_leucogenys
ENSTNIG00000010484	trmu	78	59.574	ENSMEUG00000000216	TRMU	99	59.574	Notamacropus_eugenii
ENSTNIG00000010484	trmu	95	72.070	ENSODEG00000014745	TRMU	96	71.712	Octodon_degus
ENSTNIG00000010484	trmu	98	84.337	ENSONIG00000009821	trmu	99	84.337	Oreochromis_niloticus
ENSTNIG00000010484	trmu	92	66.071	ENSOANG00000001891	TRMU	98	66.071	Ornithorhynchus_anatinus
ENSTNIG00000010484	trmu	89	71.164	ENSOCUG00000003664	TRMU	94	69.949	Oryctolagus_cuniculus
ENSTNIG00000010484	trmu	99	79.426	ENSORLG00000019015	trmu	100	79.426	Oryzias_latipes
ENSTNIG00000010484	trmu	99	79.187	ENSORLG00020006830	trmu	100	79.187	Oryzias_latipes_hni
ENSTNIG00000010484	trmu	99	79.187	ENSORLG00015003907	trmu	100	79.187	Oryzias_latipes_hsok
ENSTNIG00000010484	trmu	57	81.743	ENSOMEG00000015541	trmu	87	81.743	Oryzias_melastigma
ENSTNIG00000010484	trmu	96	69.877	ENSOGAG00000008096	TRMU	97	69.877	Otolemur_garnettii
ENSTNIG00000010484	trmu	98	65.468	ENSOARG00000019475	TRMU	100	65.468	Ovis_aries
ENSTNIG00000010484	trmu	100	69.340	ENSPPAG00000033944	TRMU	100	69.340	Pan_paniscus
ENSTNIG00000010484	trmu	95	71.322	ENSPPRG00000004197	TRMU	95	71.322	Panthera_pardus
ENSTNIG00000010484	trmu	66	70.968	ENSPTIG00000014122	TRMU	97	72.556	Panthera_tigris_altaica
ENSTNIG00000010484	trmu	100	69.340	ENSPTRG00000014510	TRMU	100	69.340	Pan_troglodytes
ENSTNIG00000010484	trmu	94	70.529	ENSPANG00000023074	TRMU	97	67.847	Papio_anubis
ENSTNIG00000010484	trmu	98	75.779	ENSPKIG00000002849	trmu	99	75.779	Paramormyrops_kingsleyae
ENSTNIG00000010484	trmu	86	73.497	ENSPSIG00000013020	TRMU	95	73.497	Pelodiscus_sinensis
ENSTNIG00000010484	trmu	98	81.295	ENSPMGG00000004083	trmu	100	81.295	Periophthalmus_magnuspinnatus
ENSTNIG00000010484	trmu	95	71.322	ENSPEMG00000014007	Trmu	96	71.322	Peromyscus_maniculatus_bairdii
ENSTNIG00000010484	trmu	93	68.193	ENSPCIG00000009923	TRMU	93	68.010	Phascolarctos_cinereus
ENSTNIG00000010484	trmu	96	79.753	ENSPFOG00000008197	trmu	90	79.753	Poecilia_formosa
ENSTNIG00000010484	trmu	98	83.373	ENSPLAG00000008414	trmu	99	83.373	Poecilia_latipinna
ENSTNIG00000010484	trmu	98	83.614	ENSPMEG00000004326	trmu	99	83.614	Poecilia_mexicana
ENSTNIG00000010484	trmu	98	83.453	ENSPREG00000007980	trmu	99	83.453	Poecilia_reticulata
ENSTNIG00000010484	trmu	100	69.340	ENSPPYG00000011949	TRMU	100	69.340	Pongo_abelii
ENSTNIG00000010484	trmu	89	63.757	ENSPCAG00000013462	TRMU	97	63.757	Procavia_capensis
ENSTNIG00000010484	trmu	95	70.574	ENSPCOG00000016539	TRMU	96	70.574	Propithecus_coquereli
ENSTNIG00000010484	trmu	94	66.499	ENSPVAG00000013202	TRMU	95	66.499	Pteropus_vampyrus
ENSTNIG00000010484	trmu	98	83.855	ENSPNYG00000005629	trmu	99	83.855	Pundamilia_nyererei
ENSTNIG00000010484	trmu	97	77.724	ENSPNAG00000006339	trmu	96	77.724	Pygocentrus_nattereri
ENSTNIG00000010484	trmu	96	70.123	ENSRNOG00000016465	Trmu	97	70.123	Rattus_norvegicus
ENSTNIG00000010484	trmu	96	69.383	ENSRBIG00000038973	TRMU	96	69.383	Rhinopithecus_bieti
ENSTNIG00000010484	trmu	96	69.630	ENSRROG00000004267	TRMU	96	69.630	Rhinopithecus_roxellana
ENSTNIG00000010484	trmu	90	33.167	YDL033C	SLM3	91	33.167	Saccharomyces_cerevisiae
ENSTNIG00000010484	trmu	99	68.571	ENSSBOG00000030184	TRMU	99	68.571	Saimiri_boliviensis_boliviensis
ENSTNIG00000010484	trmu	87	75.202	ENSSFOG00015020664	trmu	97	75.202	Scleropages_formosus
ENSTNIG00000010484	trmu	98	82.734	ENSSMAG00000019450	trmu	99	82.734	Scophthalmus_maximus
ENSTNIG00000010484	trmu	98	85.612	ENSSDUG00000011913	trmu	99	85.612	Seriola_dumerili
ENSTNIG00000010484	trmu	98	85.372	ENSSLDG00000011684	trmu	99	85.372	Seriola_lalandi_dorsalis
ENSTNIG00000010484	trmu	94	62.972	ENSSPUG00000017123	TRMU	93	62.972	Sphenodon_punctatus
ENSTNIG00000010484	trmu	98	82.651	ENSSPAG00000021875	trmu	99	82.651	Stegastes_partitus
ENSTNIG00000010484	trmu	96	72.099	ENSSSCG00000000007	TRMU	96	72.099	Sus_scrofa
ENSTNIG00000010484	trmu	88	73.333	ENSTGUG00000003663	-	100	73.333	Taeniopygia_guttata
ENSTNIG00000010484	trmu	98	90.843	ENSTRUG00000001231	trmu	100	90.843	Takifugu_rubripes
ENSTNIG00000010484	trmu	71	55.556	ENSTBEG00000011276	-	77	55.556	Tupaia_belangeri
ENSTNIG00000010484	trmu	95	71.820	ENSTTRG00000004160	TRMU	95	71.820	Tursiops_truncatus
ENSTNIG00000010484	trmu	69	72.449	ENSUAMG00000024825	TRMU	97	72.449	Ursus_americanus
ENSTNIG00000010484	trmu	94	59.548	ENSUMAG00000019079	TRMU	97	71.815	Ursus_maritimus
ENSTNIG00000010484	trmu	52	63.348	ENSVPAG00000000685	-	100	63.348	Vicugna_pacos
ENSTNIG00000010484	trmu	95	69.825	ENSVVUG00000024963	TRMU	95	69.825	Vulpes_vulpes
ENSTNIG00000010484	trmu	97	74.696	ENSXETG00000023304	trmu	96	74.696	Xenopus_tropicalis
ENSTNIG00000010484	trmu	98	82.619	ENSXCOG00000015105	trmu	99	82.619	Xiphophorus_couchianus
ENSTNIG00000010484	trmu	98	84.412	ENSXMAG00000006697	trmu	99	84.412	Xiphophorus_maculatus