EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000010494 (Gene tree)
Gene ID: -
Gene Symbol: srsf11
Alias: sfrs11|wu:fb37g02|zgc:55515
Full Name: serine/arginine-rich splicing factor 11
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 5789 bases
Position: chr1:17052452-17058240
Accession: ZDB-GENE-030131-605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013403	RRM_1	PF00076.22	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013597	-	1323	-	ENSTNIP00000013403	440 (aa)	-	H3CYR8

Gene Model

Click here to download ENSTNIG00000010494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000010494	srsf11	56	56.934	ENSTNIG00000013463	srek1	69	40.072

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010494	srsf11	100	61.653	ENSG00000116754	SRSF11	63	82.716	Homo_sapiens
ENSTNIG00000010494	srsf11	100	61.017	ENSAPOG00000004488	-	75	92.593	Acanthochromis_polyacanthus
ENSTNIG00000010494	srsf11	58	52.985	ENSAMEG00000011327	SREK1	55	53.881	Ailuropoda_melanoleuca
ENSTNIG00000010494	srsf11	69	65.686	ENSACIG00000018075	-	75	92.593	Amphilophus_citrinellus
ENSTNIG00000010494	srsf11	81	30.664	ENSAOCG00000024379	srek1	50	30.612	Amphiprion_ocellaris
ENSTNIG00000010494	srsf11	100	61.441	ENSAPEG00000003619	SRSF11	75	92.593	Amphiprion_percula
ENSTNIG00000010494	srsf11	100	59.110	ENSATEG00000007534	-	75	92.593	Anabas_testudineus
ENSTNIG00000010494	srsf11	51	70.370	ENSAPLG00000003948	-	70	45.230	Anas_platyrhynchos
ENSTNIG00000010494	srsf11	100	62.448	ENSAMXG00000008655	-	99	61.489	Astyanax_mexicanus
ENSTNIG00000010494	srsf11	100	61.441	ENSCJAG00000017704	SRSF11	50	74.528	Callithrix_jacchus
ENSTNIG00000010494	srsf11	68	75.238	ENSCHIG00000025295	SRSF11	75	77.273	Capra_hircus
ENSTNIG00000010494	srsf11	100	76.445	ENSCSEG00000008551	srsf11	99	74.788	Cynoglossus_semilaevis
ENSTNIG00000010494	srsf11	100	61.311	ENSCVAG00000006934	-	55	79.245	Cyprinodon_variegatus
ENSTNIG00000010494	srsf11	100	72.377	ENSCVAG00000010634	-	99	69.499	Cyprinodon_variegatus
ENSTNIG00000010494	srsf11	89	36.122	ENSDARG00000009764	srek1	55	41.489	Danio_rerio
ENSTNIG00000010494	srsf11	66	53.020	ENSEBUG00000014055	srsf11	58	59.722	Eptatretus_burgeri
ENSTNIG00000010494	srsf11	100	71.279	ENSELUG00000023887	srsf11	99	72.537	Esox_lucius
ENSTNIG00000010494	srsf11	100	54.167	ENSFHEG00000013348	-	99	54.004	Fundulus_heteroclitus
ENSTNIG00000010494	srsf11	100	70.021	ENSGMOG00000015896	srsf11	99	69.362	Gadus_morhua
ENSTNIG00000010494	srsf11	100	76.160	ENSGACG00000009346	srsf11	99	77.007	Gasterosteus_aculeatus
ENSTNIG00000010494	srsf11	64	43.490	ENSGAGG00000006087	SREK1	70	66.304	Gopherus_agassizii
ENSTNIG00000010494	srsf11	100	54.681	ENSHBUG00000007092	-	52	77.725	Haplochromis_burtoni
ENSTNIG00000010494	srsf11	88	35.992	ENSIPUG00000016851	srek1	54	44.404	Ictalurus_punctatus
ENSTNIG00000010494	srsf11	100	61.522	ENSKMAG00000005868	-	99	58.947	Kryptolebias_marmoratus
ENSTNIG00000010494	srsf11	100	72.912	ENSKMAG00000009775	srsf11	99	76.524	Kryptolebias_marmoratus
ENSTNIG00000010494	srsf11	100	78.344	ENSLBEG00000024167	srsf11	83	100.000	Labrus_bergylta
ENSTNIG00000010494	srsf11	100	60.248	ENSLOCG00000009617	srsf11	99	62.810	Lepisosteus_oculatus
ENSTNIG00000010494	srsf11	75	46.685	ENSLAFG00000013853	SREK1	61	53.881	Loxodonta_africana
ENSTNIG00000010494	srsf11	52	43.894	ENSMMUG00000014586	SREK1	75	71.951	Macaca_mulatta
ENSTNIG00000010494	srsf11	100	60.934	ENSMAMG00000015002	-	76	92.593	Mastacembelus_armatus
ENSTNIG00000010494	srsf11	99	64.163	ENSMMOG00000016751	-	75	92.593	Mola_mola
ENSTNIG00000010494	srsf11	100	60.934	MGP_CAROLIEiJ_G0025767	Srsf11	81	82.716	Mus_caroli
ENSTNIG00000010494	srsf11	100	60.934	ENSMUSG00000055436	Srsf11	80	82.716	Mus_musculus
ENSTNIG00000010494	srsf11	100	60.934	MGP_PahariEiJ_G0027217	Srsf11	81	82.716	Mus_pahari
ENSTNIG00000010494	srsf11	100	60.722	MGP_SPRETEiJ_G0026719	Srsf11	81	82.716	Mus_spretus
ENSTNIG00000010494	srsf11	65	73.394	ENSOCUG00000002001	-	78	74.762	Oryctolagus_cuniculus
ENSTNIG00000010494	srsf11	100	74.255	ENSORLG00000007753	srsf11	99	72.996	Oryzias_latipes
ENSTNIG00000010494	srsf11	75	65.476	ENSORLG00020009393	-	72	92.593	Oryzias_latipes_hni
ENSTNIG00000010494	srsf11	100	75.000	ENSORLG00020016204	srsf11	99	72.899	Oryzias_latipes_hni
ENSTNIG00000010494	srsf11	100	75.212	ENSORLG00015011944	srsf11	99	73.109	Oryzias_latipes_hsok
ENSTNIG00000010494	srsf11	75	65.476	ENSORLG00015009374	-	72	92.593	Oryzias_latipes_hsok
ENSTNIG00000010494	srsf11	100	73.474	ENSOMEG00000022450	srsf11	99	73.069	Oryzias_melastigma
ENSTNIG00000010494	srsf11	79	66.412	ENSPKIG00000025563	srek1	54	44.128	Paramormyrops_kingsleyae
ENSTNIG00000010494	srsf11	100	58.562	ENSPFOG00000014895	-	99	58.212	Poecilia_formosa
ENSTNIG00000010494	srsf11	100	58.351	ENSPLAG00000009484	-	99	58.004	Poecilia_latipinna
ENSTNIG00000010494	srsf11	100	56.329	ENSPMEG00000023453	-	99	58.004	Poecilia_mexicana
ENSTNIG00000010494	srsf11	100	58.140	ENSPREG00000009065	SRSF11	99	57.796	Poecilia_reticulata
ENSTNIG00000010494	srsf11	100	61.441	ENSRBIG00000042971	SRSF11	62	82.716	Rhinopithecus_bieti
ENSTNIG00000010494	srsf11	100	61.441	ENSSBOG00000033461	SRSF11	62	82.716	Saimiri_boliviensis_boliviensis
ENSTNIG00000010494	srsf11	100	63.466	ENSSFOG00015014887	srsf11	99	61.925	Scleropages_formosus
ENSTNIG00000010494	srsf11	100	61.146	ENSSPAG00000016483	-	66	92.683	Stegastes_partitus
ENSTNIG00000010494	srsf11	100	58.140	ENSXMAG00000019180	SRSF11	99	57.796	Xiphophorus_maculatus