EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000010542 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2038 bases
Position: chr10:12292530-12294567
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013454	RRM_1	PF00076.22	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013648	-	903	-	ENSTNIP00000013454	301 (aa)	-	H3CYW9

Gene Model

Click here to download ENSTNIG00000010542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000010542	-	79	47.951	ENSTNIG00000001154	-	97	47.718
ENSTNIG00000010542	-	88	36.027	ENSTNIG00000001303	zgc:123010	89	36.027

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010542	-	99	35.061	ENSAPOG00000019633	zgc:123010	59	35.738	Acanthochromis_polyacanthus
ENSTNIG00000010542	-	79	35.270	ENSAPOG00000001034	-	57	34.728	Acanthochromis_polyacanthus
ENSTNIG00000010542	-	99	37.304	ENSACIG00000021684	zgc:123010	80	36.991	Amphilophus_citrinellus
ENSTNIG00000010542	-	99	35.366	ENSAOCG00000005910	zgc:123010	59	36.066	Amphiprion_ocellaris
ENSTNIG00000010542	-	99	35.061	ENSAPEG00000014305	zgc:123010	62	35.738	Amphiprion_percula
ENSTNIG00000010542	-	93	58.683	ENSATEG00000018885	si:dkey-33c12.4	52	58.485	Anabas_testudineus
ENSTNIG00000010542	-	99	36.556	ENSATEG00000001220	zgc:123010	59	37.338	Anabas_testudineus
ENSTNIG00000010542	-	97	33.951	ENSATEG00000022160	-	61	34.416	Anabas_testudineus
ENSTNIG00000010542	-	67	40.594	ENSAPLG00000013566	-	96	40.594	Anas_platyrhynchos
ENSTNIG00000010542	-	99	33.435	ENSACLG00000012346	-	58	35.017	Astatotilapia_calliptera
ENSTNIG00000010542	-	99	34.535	ENSACLG00000010188	zgc:123010	64	34.234	Astatotilapia_calliptera
ENSTNIG00000010542	-	95	45.210	ENSAMXG00000010871	si:dkey-33c12.4	51	46.541	Astyanax_mexicanus
ENSTNIG00000010542	-	91	37.755	ENSAMXG00000041967	zgc:123010	56	37.415	Astyanax_mexicanus
ENSTNIG00000010542	-	89	36.070	ENSCPBG00000024454	-	50	36.070	Chrysemys_picta_bellii
ENSTNIG00000010542	-	99	35.671	ENSCVAG00000013288	zgc:123010	63	35.366	Cyprinodon_variegatus
ENSTNIG00000010542	-	98	51.913	ENSCVAG00000006564	-	54	53.216	Cyprinodon_variegatus
ENSTNIG00000010542	-	91	38.225	ENSDARG00000039082	zgc:123010	61	38.225	Danio_rerio
ENSTNIG00000010542	-	95	41.349	ENSDARG00000057890	si:dkey-33c12.4	52	42.121	Danio_rerio
ENSTNIG00000010542	-	99	35.294	ENSELUG00000021447	-	61	36.545	Esox_lucius
ENSTNIG00000010542	-	99	43.407	ENSELUG00000002009	si:dkey-33c12.4	89	47.386	Esox_lucius
ENSTNIG00000010542	-	99	35.494	ENSELUG00000022008	zgc:123010	72	36.755	Esox_lucius
ENSTNIG00000010542	-	99	36.757	ENSELUG00000001633	-	54	37.752	Esox_lucius
ENSTNIG00000010542	-	75	33.858	ENSFALG00000008867	-	97	33.992	Ficedula_albicollis
ENSTNIG00000010542	-	99	34.911	ENSFHEG00000002306	zgc:123010	63	34.615	Fundulus_heteroclitus
ENSTNIG00000010542	-	99	34.954	ENSGMOG00000018473	zgc:123010	81	35.855	Gadus_morhua
ENSTNIG00000010542	-	79	50.199	ENSGMOG00000001292	-	99	50.199	Gadus_morhua
ENSTNIG00000010542	-	80	35.145	ENSGALG00000036747	TTC31	53	35.145	Gallus_gallus
ENSTNIG00000010542	-	96	36.250	ENSGAFG00000009373	zgc:123010	63	35.366	Gambusia_affinis
ENSTNIG00000010542	-	99	34.451	ENSGACG00000007620	zgc:123010	87	34.146	Gasterosteus_aculeatus
ENSTNIG00000010542	-	99	62.300	ENSGACG00000004936	-	91	65.052	Gasterosteus_aculeatus
ENSTNIG00000010542	-	99	32.827	ENSHBUG00000016720	-	58	34.343	Haplochromis_burtoni
ENSTNIG00000010542	-	98	46.243	ENSIPUG00000005998	si:dkey-33c12.4	55	46.512	Ictalurus_punctatus
ENSTNIG00000010542	-	81	39.482	ENSKMAG00000006468	-	50	39.344	Kryptolebias_marmoratus
ENSTNIG00000010542	-	99	36.280	ENSKMAG00000021350	zgc:123010	59	37.049	Kryptolebias_marmoratus
ENSTNIG00000010542	-	93	51.130	ENSKMAG00000016610	si:dkey-33c12.4	54	55.143	Kryptolebias_marmoratus
ENSTNIG00000010542	-	92	36.156	ENSLBEG00000013518	-	60	35.738	Labrus_bergylta
ENSTNIG00000010542	-	99	51.111	ENSLBEG00000021088	-	54	55.556	Labrus_bergylta
ENSTNIG00000010542	-	99	36.970	ENSLBEG00000023984	zgc:123010	63	36.667	Labrus_bergylta
ENSTNIG00000010542	-	91	37.884	ENSLACG00000009001	zgc:123010	66	37.884	Latimeria_chalumnae
ENSTNIG00000010542	-	88	36.086	ENSLACG00000004602	-	59	36.086	Latimeria_chalumnae
ENSTNIG00000010542	-	99	35.417	ENSLOCG00000008967	zgc:123010	61	35.783	Lepisosteus_oculatus
ENSTNIG00000010542	-	99	39.837	ENSLOCG00000001861	-	53	41.349	Lepisosteus_oculatus
ENSTNIG00000010542	-	88	36.177	ENSMAMG00000002377	-	68	35.836	Mastacembelus_armatus
ENSTNIG00000010542	-	90	35.739	ENSMAMG00000003439	-	82	35.739	Mastacembelus_armatus
ENSTNIG00000010542	-	99	35.976	ENSMAMG00000001145	zgc:123010	72	37.838	Mastacembelus_armatus
ENSTNIG00000010542	-	97	37.543	ENSMAMG00000002460	-	70	38.491	Mastacembelus_armatus
ENSTNIG00000010542	-	88	36.268	ENSMAMG00000003394	-	78	36.268	Mastacembelus_armatus
ENSTNIG00000010542	-	99	34.535	ENSMZEG00005027733	zgc:123010	64	34.234	Maylandia_zebra
ENSTNIG00000010542	-	99	34.535	ENSMZEG00005014740	-	74	36.213	Maylandia_zebra
ENSTNIG00000010542	-	85	33.793	ENSMMOG00000017955	-	70	33.793	Mola_mola
ENSTNIG00000010542	-	88	37.113	ENSMMOG00000010544	zgc:123010	64	37.113	Mola_mola
ENSTNIG00000010542	-	88	75.497	ENSMALG00000002265	si:dkey-33c12.4	56	51.437	Monopterus_albus
ENSTNIG00000010542	-	99	35.976	ENSMALG00000017698	zgc:123010	59	36.721	Monopterus_albus
ENSTNIG00000010542	-	88	36.426	ENSNBRG00000021157	zgc:123010	66	36.426	Neolamprologus_brichardi
ENSTNIG00000010542	-	93	64.966	ENSONIG00000012263	-	93	65.172	Oreochromis_niloticus
ENSTNIG00000010542	-	82	53.216	ENSONIG00000007538	-	90	49.583	Oreochromis_niloticus
ENSTNIG00000010542	-	86	36.054	ENSONIG00000000297	-	97	36.054	Oreochromis_niloticus
ENSTNIG00000010542	-	99	33.233	ENSONIG00000018353	zgc:123010	67	32.931	Oreochromis_niloticus
ENSTNIG00000010542	-	86	36.641	ENSORLG00000007675	zgc:123010	55	36.260	Oryzias_latipes
ENSTNIG00000010542	-	94	66.071	ENSORLG00000029651	si:dkey-33c12.4	55	56.024	Oryzias_latipes
ENSTNIG00000010542	-	94	66.667	ENSORLG00020008750	si:dkey-33c12.4	51	56.325	Oryzias_latipes_hni
ENSTNIG00000010542	-	86	37.023	ENSORLG00020003457	zgc:123010	55	36.641	Oryzias_latipes_hni
ENSTNIG00000010542	-	99	35.780	ENSORLG00015008373	zgc:123010	63	35.474	Oryzias_latipes_hsok
ENSTNIG00000010542	-	99	36.086	ENSOMEG00000003408	zgc:123010	63	35.780	Oryzias_melastigma
ENSTNIG00000010542	-	95	63.842	ENSOMEG00000008913	-	52	55.090	Oryzias_melastigma
ENSTNIG00000010542	-	99	33.742	ENSPKIG00000015521	zgc:123010	66	34.884	Paramormyrops_kingsleyae
ENSTNIG00000010542	-	99	41.737	ENSPKIG00000011819	-	51	43.373	Paramormyrops_kingsleyae
ENSTNIG00000010542	-	91	38.516	ENSPMGG00000020251	zgc:123010	66	38.516	Periophthalmus_magnuspinnatus
ENSTNIG00000010542	-	76	42.105	ENSPMAG00000009352	-	86	40.079	Petromyzon_marinus
ENSTNIG00000010542	-	86	36.620	ENSPMAG00000004544	zgc:123010	99	36.620	Petromyzon_marinus
ENSTNIG00000010542	-	99	35.976	ENSPFOG00000001073	zgc:123010	63	35.671	Poecilia_formosa
ENSTNIG00000010542	-	82	52.047	ENSPFOG00000017092	-	61	40.404	Poecilia_formosa
ENSTNIG00000010542	-	99	35.976	ENSPLAG00000007711	zgc:123010	63	35.671	Poecilia_latipinna
ENSTNIG00000010542	-	99	35.976	ENSPMEG00000005092	zgc:123010	63	35.671	Poecilia_mexicana
ENSTNIG00000010542	-	99	36.420	ENSPREG00000019587	zgc:123010	66	38.462	Poecilia_reticulata
ENSTNIG00000010542	-	96	34.320	ENSPNYG00000023304	-	74	35.577	Pundamilia_nyererei
ENSTNIG00000010542	-	99	34.639	ENSPNYG00000007893	zgc:123010	64	34.337	Pundamilia_nyererei
ENSTNIG00000010542	-	100	43.251	ENSPNAG00000018386	si:dkey-33c12.4	52	45.872	Pygocentrus_nattereri
ENSTNIG00000010542	-	99	36.875	ENSPNAG00000007579	zgc:123010	58	37.755	Pygocentrus_nattereri
ENSTNIG00000010542	-	92	44.514	ENSSFOG00015005186	-	53	45.079	Scleropages_formosus
ENSTNIG00000010542	-	99	35.435	ENSSFOG00015021394	zgc:123010	64	35.484	Scleropages_formosus
ENSTNIG00000010542	-	92	42.815	ENSSFOG00015009199	-	55	42.478	Scleropages_formosus
ENSTNIG00000010542	-	99	37.160	ENSSMAG00000002904	zgc:123010	63	37.987	Scophthalmus_maximus
ENSTNIG00000010542	-	91	34.122	ENSSMAG00000021096	-	59	33.673	Scophthalmus_maximus
ENSTNIG00000010542	-	93	55.966	ENSSDUG00000003213	si:dkey-33c12.4	57	56.034	Seriola_dumerili
ENSTNIG00000010542	-	92	34.936	ENSSDUG00000014026	-	61	34.727	Seriola_dumerili
ENSTNIG00000010542	-	99	36.280	ENSSDUG00000008651	zgc:123010	59	37.049	Seriola_dumerili
ENSTNIG00000010542	-	93	56.534	ENSSLDG00000009448	si:dkey-33c12.4	53	56.609	Seriola_lalandi_dorsalis
ENSTNIG00000010542	-	99	36.280	ENSSLDG00000019386	zgc:123010	61	37.049	Seriola_lalandi_dorsalis
ENSTNIG00000010542	-	99	35.671	ENSSPAG00000013621	zgc:123010	62	35.366	Stegastes_partitus
ENSTNIG00000010542	-	91	36.601	ENSTRUG00000024824	zgc:123010	60	36.601	Takifugu_rubripes
ENSTNIG00000010542	-	91	77.987	ENSTRUG00000022374	si:dkey-33c12.4	57	56.568	Takifugu_rubripes
ENSTNIG00000010542	-	88	33.684	ENSXETG00000033896	-	99	33.684	Xenopus_tropicalis
ENSTNIG00000010542	-	89	36.246	ENSXCOG00000012281	zgc:123010	72	36.246	Xiphophorus_couchianus
ENSTNIG00000010542	-	99	35.976	ENSXMAG00000002598	zgc:123010	63	35.671	Xiphophorus_maculatus