EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSTNIG00000010615 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4190 bases
Position: chr3:128720-132909
Accession: ZDB-GENE-050522-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013528	KH_1	PF00013.29	1.3e-55	1	3
ENSTNIP00000013528	KH_1	PF00013.29	1.3e-55	2	3
ENSTNIP00000013528	KH_1	PF00013.29	1.3e-55	3	3
ENSTNIP00000013528	KH_2	PF07650.17	2.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013722	-	936	-	ENSTNIP00000013528	311 (aa)	-	H3CZ43

Gene Model

Click here to download ENSTNIG00000010615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000010615	pcbp3	97	79.208	ENSTNIG00000012585	pcbp2	95	79.208
ENSTNIG00000010615	pcbp3	95	34.307	ENSTNIG00000017755	igf2bp3	60	34.307
ENSTNIG00000010615	pcbp3	76	51.429	ENSTNIG00000006005	hnrnpk	53	51.429
ENSTNIG00000010615	pcbp3	64	42.857	ENSTNIG00000018993	NOVA1	50	42.466
ENSTNIG00000010615	pcbp3	77	40.299	ENSTNIG00000011634	nova1	55	40.299
ENSTNIG00000010615	pcbp3	97	67.213	ENSTNIG00000017887	-	72	67.213
ENSTNIG00000010615	pcbp3	100	85.669	ENSTNIG00000008872	-	97	85.669
ENSTNIG00000010615	pcbp3	80	51.429	ENSTNIG00000007554	hnrpkl	58	51.429
ENSTNIG00000010615	pcbp3	90	36.691	ENSTNIG00000016472	igf2bp2b	64	36.250
ENSTNIG00000010615	pcbp3	72	40.580	ENSTNIG00000014067	khsrp	56	40.580
ENSTNIG00000010615	pcbp3	94	34.043	ENSTNIG00000009019	fubp3	60	34.043
ENSTNIG00000010615	pcbp3	92	31.111	ENSTNIG00000013986	igf2bp1	57	32.117
ENSTNIG00000010615	pcbp3	77	36.364	ENSTNIG00000019815	-	85	36.364
ENSTNIG00000010615	pcbp3	97	42.188	ENSTNIG00000005858	-	65	42.188
ENSTNIG00000010615	pcbp3	76	80.347	ENSTNIG00000003546	zgc:110045	85	80.347