EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000010642 (Gene tree)
Gene ID: -
Gene Symbol: polrmt
Alias: si:dkey-21e2.1|si:dkeyp-74c5.5|wu:fb73g10
Full Name: polymerase (RNA) mitochondrial (DNA directed)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 26223 bases
Position: chr1:13502953-13529175
Accession: ZDB-GENE-030131-1528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013557	RNA_pol	PF00940.19	5.5e-170	1	1
ENSTNIP00000013556	RNA_pol	PF00940.19	8.7e-167	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013751	-	3045	-	ENSTNIP00000013557	1014 (aa)	-	H3CZ72
ENSTNIT00000013750	-	3042	-	ENSTNIP00000013556	1013 (aa)	-	H3CZ71

Gene Model

Click here to download ENSTNIG00000010642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010642's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010642	polrmt	100	52.208	ENSG00000099821	POLRMT	66	75.000	Homo_sapiens
ENSTNIG00000010642	polrmt	100	86.193	ENSAPOG00000003942	polrmt	76	86.193	Acanthochromis_polyacanthus
ENSTNIG00000010642	polrmt	100	51.509	ENSAMEG00000002745	POLRMT	82	51.509	Ailuropoda_melanoleuca
ENSTNIG00000010642	polrmt	100	85.207	ENSACIG00000016078	polrmt	88	85.207	Amphilophus_citrinellus
ENSTNIG00000010642	polrmt	100	86.292	ENSAOCG00000020208	polrmt	78	86.114	Amphiprion_ocellaris
ENSTNIG00000010642	polrmt	100	86.193	ENSAPEG00000007949	polrmt	76	86.193	Amphiprion_percula
ENSTNIG00000010642	polrmt	100	84.236	ENSATEG00000024025	polrmt	81	82.069	Anabas_testudineus
ENSTNIG00000010642	polrmt	100	58.944	ENSAPLG00000003051	POLRMT	99	58.658	Anas_platyrhynchos
ENSTNIG00000010642	polrmt	100	51.663	ENSANAG00000032916	POLRMT	82	51.663	Aotus_nancymaae
ENSTNIG00000010642	polrmt	100	86.193	ENSACLG00000003766	polrmt	78	86.193	Astatotilapia_calliptera
ENSTNIG00000010642	polrmt	93	78.989	ENSAMXG00000018258	polrmt	77	78.989	Astyanax_mexicanus
ENSTNIG00000010642	polrmt	100	53.307	ENSBTAG00000015051	POLRMT	83	52.981	Bos_taurus
ENSTNIG00000010642	polrmt	59	43.243	WBGene00013680	rpom-1	54	42.349	Caenorhabditis_elegans
ENSTNIG00000010642	polrmt	100	51.227	ENSCJAG00000012913	POLRMT	82	51.227	Callithrix_jacchus
ENSTNIG00000010642	polrmt	100	53.033	ENSCAFG00000019711	POLRMT	83	53.033	Canis_familiaris
ENSTNIG00000010642	polrmt	100	53.033	ENSCAFG00020016843	POLRMT	85	53.033	Canis_lupus_dingo
ENSTNIG00000010642	polrmt	100	53.620	ENSCHIG00000013267	POLRMT	83	53.477	Capra_hircus
ENSTNIG00000010642	polrmt	92	57.298	ENSCAPG00000016900	POLRMT	88	57.298	Cavia_aperea
ENSTNIG00000010642	polrmt	100	48.771	ENSCPOG00000023061	POLRMT	83	48.869	Cavia_porcellus
ENSTNIG00000010642	polrmt	100	50.929	ENSCCAG00000025014	POLRMT	82	50.929	Cebus_capucinus
ENSTNIG00000010642	polrmt	100	51.365	ENSCATG00000040393	POLRMT	82	51.365	Cercocebus_atys
ENSTNIG00000010642	polrmt	99	49.462	ENSCLAG00000007473	POLRMT	71	49.658	Chinchilla_lanigera
ENSTNIG00000010642	polrmt	100	50.388	ENSCSAG00000012942	POLRMT	82	50.388	Chlorocebus_sabaeus
ENSTNIG00000010642	polrmt	100	62.832	ENSCPBG00000009869	POLRMT	88	62.832	Chrysemys_picta_bellii
ENSTNIG00000010642	polrmt	79	44.623	ENSCSAVG00000000440	-	99	44.623	Ciona_savignyi
ENSTNIG00000010642	polrmt	100	51.126	ENSCANG00000038011	POLRMT	82	51.126	Colobus_angolensis_palliatus
ENSTNIG00000010642	polrmt	98	57.203	ENSCGRG00001021311	Polrmt	83	57.203	Cricetulus_griseus_chok1gshd
ENSTNIG00000010642	polrmt	100	52.246	ENSCGRG00000011134	Polrmt	84	52.306	Cricetulus_griseus_crigri
ENSTNIG00000010642	polrmt	100	70.936	ENSCSEG00000002734	polrmt	77	70.936	Cynoglossus_semilaevis
ENSTNIG00000010642	polrmt	100	84.418	ENSCVAG00000005949	polrmt	83	83.884	Cyprinodon_variegatus
ENSTNIG00000010642	polrmt	99	70.177	ENSDARG00000101220	polrmt	79	70.177	Danio_rerio
ENSTNIG00000010642	polrmt	92	62.903	ENSDORG00000014125	Polrmt	82	62.903	Dipodomys_ordii
ENSTNIG00000010642	polrmt	100	43.879	FBgn0261938	mtRNApol	77	43.879	Drosophila_melanogaster
ENSTNIG00000010642	polrmt	100	49.510	ENSETEG00000003476	POLRMT	82	49.902	Echinops_telfairi
ENSTNIG00000010642	polrmt	91	53.441	ENSEBUG00000013453	-	99	53.441	Eptatretus_burgeri
ENSTNIG00000010642	polrmt	100	52.797	ENSEASG00005021493	POLRMT	82	52.993	Equus_asinus_asinus
ENSTNIG00000010642	polrmt	100	52.797	ENSECAG00000032711	POLRMT	82	52.993	Equus_caballus
ENSTNIG00000010642	polrmt	99	74.803	ENSELUG00000019319	polrmt	76	74.803	Esox_lucius
ENSTNIG00000010642	polrmt	100	53.327	ENSFCAG00000018808	POLRMT	82	53.425	Felis_catus
ENSTNIG00000010642	polrmt	84	59.647	ENSFALG00000013910	POLRMT	80	59.647	Ficedula_albicollis
ENSTNIG00000010642	polrmt	100	48.106	ENSFDAG00000020312	POLRMT	81	48.106	Fukomys_damarensis
ENSTNIG00000010642	polrmt	99	84.008	ENSFHEG00000021239	polrmt	85	83.800	Fundulus_heteroclitus
ENSTNIG00000010642	polrmt	100	73.300	ENSGMOG00000011829	polrmt	85	73.300	Gadus_morhua
ENSTNIG00000010642	polrmt	100	60.039	ENSGALG00000001377	POLRMT	81	60.039	Gallus_gallus
ENSTNIG00000010642	polrmt	100	83.235	ENSGAFG00000003953	polrmt	77	83.235	Gambusia_affinis
ENSTNIG00000010642	polrmt	100	81.970	ENSGACG00000012957	polrmt	86	81.970	Gasterosteus_aculeatus
ENSTNIG00000010642	polrmt	100	63.583	ENSGAGG00000005522	POLRMT	88	63.583	Gopherus_agassizii
ENSTNIG00000010642	polrmt	83	70.370	ENSGGOG00000023264	-	79	70.370	Gorilla_gorilla
ENSTNIG00000010642	polrmt	100	85.602	ENSHBUG00000010005	polrmt	76	85.602	Haplochromis_burtoni
ENSTNIG00000010642	polrmt	99	49.951	ENSHGLG00000019286	POLRMT	76	49.853	Heterocephalus_glaber_female
ENSTNIG00000010642	polrmt	99	49.213	ENSHGLG00100005762	POLRMT	82	49.118	Heterocephalus_glaber_male
ENSTNIG00000010642	polrmt	100	78.895	ENSHCOG00000001565	polrmt	80	80.266	Hippocampus_comes
ENSTNIG00000010642	polrmt	99	72.414	ENSIPUG00000000789	polrmt	83	71.330	Ictalurus_punctatus
ENSTNIG00000010642	polrmt	90	64.094	ENSSTOG00000003431	POLRMT	80	66.090	Ictidomys_tridecemlineatus
ENSTNIG00000010642	polrmt	99	54.122	ENSJJAG00000012916	Polrmt	83	54.255	Jaculus_jaculus
ENSTNIG00000010642	polrmt	100	79.783	ENSKMAG00000004426	polrmt	79	79.783	Kryptolebias_marmoratus
ENSTNIG00000010642	polrmt	100	85.996	ENSLBEG00000016529	polrmt	76	85.996	Labrus_bergylta
ENSTNIG00000010642	polrmt	99	67.980	ENSLACG00000011518	POLRMT	83	67.980	Latimeria_chalumnae
ENSTNIG00000010642	polrmt	100	65.782	ENSLOCG00000005222	polrmt	77	65.782	Lepisosteus_oculatus
ENSTNIG00000010642	polrmt	100	51.663	ENSLAFG00000001860	POLRMT	83	52.047	Loxodonta_africana
ENSTNIG00000010642	polrmt	100	51.072	ENSMFAG00000031466	POLRMT	82	51.072	Macaca_fascicularis
ENSTNIG00000010642	polrmt	98	51.555	ENSMNEG00000039129	POLRMT	83	50.730	Macaca_nemestrina
ENSTNIG00000010642	polrmt	85	68.627	ENSMLEG00000037404	POLRMT	80	68.627	Mandrillus_leucophaeus
ENSTNIG00000010642	polrmt	100	85.897	ENSMAMG00000019284	polrmt	76	85.897	Mastacembelus_armatus
ENSTNIG00000010642	polrmt	100	86.193	ENSMZEG00005009932	polrmt	78	86.193	Maylandia_zebra
ENSTNIG00000010642	polrmt	100	59.764	ENSMGAG00000003243	POLRMT	87	59.764	Meleagris_gallopavo
ENSTNIG00000010642	polrmt	93	63.259	ENSMAUG00000019392	Polrmt	83	63.680	Mesocricetus_auratus
ENSTNIG00000010642	polrmt	100	51.465	ENSMICG00000016701	POLRMT	82	51.765	Microcebus_murinus
ENSTNIG00000010642	polrmt	100	49.756	ENSMOCG00000008868	Polrmt	84	49.756	Microtus_ochrogaster
ENSTNIG00000010642	polrmt	95	81.211	ENSMMOG00000000705	polrmt	76	81.466	Mola_mola
ENSTNIG00000010642	polrmt	99	56.121	ENSMODG00000006478	POLRMT	81	56.121	Monodelphis_domestica
ENSTNIG00000010642	polrmt	100	83.037	ENSMALG00000021224	polrmt	77	83.037	Monopterus_albus
ENSTNIG00000010642	polrmt	93	62.780	MGP_CAROLIEiJ_G0015538	Polrmt	100	62.014	Mus_caroli
ENSTNIG00000010642	polrmt	93	62.780	ENSMUSG00000020329	Polrmt	99	61.785	Mus_musculus
ENSTNIG00000010642	polrmt	93	63.099	MGP_PahariEiJ_G0030951	Polrmt	100	61.785	Mus_pahari
ENSTNIG00000010642	polrmt	93	62.780	MGP_SPRETEiJ_G0016356	Polrmt	100	61.556	Mus_spretus
ENSTNIG00000010642	polrmt	100	52.246	ENSMPUG00000009910	POLRMT	82	52.102	Mustela_putorius_furo
ENSTNIG00000010642	polrmt	100	52.895	ENSMLUG00000009223	POLRMT	82	52.895	Myotis_lucifugus
ENSTNIG00000010642	polrmt	92	63.622	ENSNGAG00000005498	Polrmt	82	63.782	Nannospalax_galili
ENSTNIG00000010642	polrmt	99	85.828	ENSNBRG00000023530	polrmt	76	85.828	Neolamprologus_brichardi
ENSTNIG00000010642	polrmt	100	52.204	ENSNLEG00000000718	POLRMT	82	52.204	Nomascus_leucogenys
ENSTNIG00000010642	polrmt	79	55.846	ENSOPRG00000013579	POLRMT	67	56.219	Ochotona_princeps
ENSTNIG00000010642	polrmt	100	86.785	ENSONIG00000002405	polrmt	88	86.785	Oreochromis_niloticus
ENSTNIG00000010642	polrmt	100	82.480	ENSORLG00000004329	polrmt	75	82.480	Oryzias_latipes
ENSTNIG00000010642	polrmt	100	82.382	ENSORLG00020003896	polrmt	78	82.382	Oryzias_latipes_hni
ENSTNIG00000010642	polrmt	100	82.087	ENSORLG00015022238	polrmt	75	82.087	Oryzias_latipes_hsok
ENSTNIG00000010642	polrmt	100	81.065	ENSOMEG00000008292	polrmt	78	81.065	Oryzias_melastigma
ENSTNIG00000010642	polrmt	100	52.832	ENSOGAG00000007912	POLRMT	82	52.832	Otolemur_garnettii
ENSTNIG00000010642	polrmt	92	60.734	ENSOARG00000008898	POLRMT	75	67.511	Ovis_aries
ENSTNIG00000010642	polrmt	100	50.049	ENSPPAG00000043321	-	81	50.049	Pan_paniscus
ENSTNIG00000010642	polrmt	100	51.224	ENSPPAG00000030853	POLRMT	81	51.224	Pan_paniscus
ENSTNIG00000010642	polrmt	81	61.207	ENSPPRG00000001547	POLRMT	73	61.207	Panthera_pardus
ENSTNIG00000010642	polrmt	100	51.521	ENSPTRG00000010157	POLRMT	78	51.521	Pan_troglodytes
ENSTNIG00000010642	polrmt	100	50.000	ENSPTRG00000039638	-	81	50.000	Pan_troglodytes
ENSTNIG00000010642	polrmt	100	51.509	ENSPANG00000006649	POLRMT	82	51.509	Papio_anubis
ENSTNIG00000010642	polrmt	99	68.504	ENSPKIG00000024580	polrmt	79	68.504	Paramormyrops_kingsleyae
ENSTNIG00000010642	polrmt	100	80.375	ENSPMGG00000014627	polrmt	85	80.375	Periophthalmus_magnuspinnatus
ENSTNIG00000010642	polrmt	93	62.460	ENSPEMG00000011671	Polrmt	83	62.460	Peromyscus_maniculatus_bairdii
ENSTNIG00000010642	polrmt	85	56.372	ENSPMAG00000005070	-	99	56.372	Petromyzon_marinus
ENSTNIG00000010642	polrmt	99	58.466	ENSPCIG00000006103	POLRMT	82	58.014	Phascolarctos_cinereus
ENSTNIG00000010642	polrmt	99	83.021	ENSPFOG00000003911	polrmt	85	81.250	Poecilia_formosa
ENSTNIG00000010642	polrmt	91	78.502	ENSPLAG00000005743	polrmt	79	78.270	Poecilia_latipinna
ENSTNIG00000010642	polrmt	69	73.571	ENSPMEG00000011484	polrmt	76	73.571	Poecilia_mexicana
ENSTNIG00000010642	polrmt	99	81.065	ENSPMEG00000008947	polrmt	82	81.065	Poecilia_mexicana
ENSTNIG00000010642	polrmt	99	82.725	ENSPREG00000007650	polrmt	77	82.725	Poecilia_reticulata
ENSTNIG00000010642	polrmt	92	64.979	ENSPPYG00000009282	POLRMT	80	64.979	Pongo_abelii
ENSTNIG00000010642	polrmt	93	62.500	ENSPCAG00000010816	POLRMT	77	62.500	Procavia_capensis
ENSTNIG00000010642	polrmt	100	49.368	ENSPCOG00000014539	POLRMT	82	49.561	Propithecus_coquereli
ENSTNIG00000010642	polrmt	100	51.765	ENSPVAG00000008403	POLRMT	82	51.765	Pteropus_vampyrus
ENSTNIG00000010642	polrmt	100	85.503	ENSPNYG00000020790	polrmt	76	85.503	Pundamilia_nyererei
ENSTNIG00000010642	polrmt	99	73.399	ENSPNAG00000019790	polrmt	79	73.587	Pygocentrus_nattereri
ENSTNIG00000010642	polrmt	100	51.816	ENSRNOG00000024879	Polrmt	84	51.816	Rattus_norvegicus
ENSTNIG00000010642	polrmt	100	51.512	ENSRBIG00000006728	POLRMT	82	51.512	Rhinopithecus_bieti
ENSTNIG00000010642	polrmt	100	51.270	ENSRROG00000040809	POLRMT	82	51.270	Rhinopithecus_roxellana
ENSTNIG00000010642	polrmt	79	36.823	YFL036W	-	59	36.823	Saccharomyces_cerevisiae
ENSTNIG00000010642	polrmt	100	51.420	ENSSBOG00000025388	POLRMT	82	51.420	Saimiri_boliviensis_boliviensis
ENSTNIG00000010642	polrmt	80	61.794	ENSSHAG00000009387	-	100	61.794	Sarcophilus_harrisii
ENSTNIG00000010642	polrmt	99	68.732	ENSSFOG00015005074	polrmt	82	68.732	Scleropages_formosus
ENSTNIG00000010642	polrmt	100	83.432	ENSSMAG00000011851	polrmt	76	83.432	Scophthalmus_maximus
ENSTNIG00000010642	polrmt	100	85.108	ENSSDUG00000004410	polrmt	81	82.939	Seriola_dumerili
ENSTNIG00000010642	polrmt	100	85.404	ENSSLDG00000010643	polrmt	81	83.235	Seriola_lalandi_dorsalis
ENSTNIG00000010642	polrmt	100	85.799	ENSSPAG00000018740	polrmt	78	85.799	Stegastes_partitus
ENSTNIG00000010642	polrmt	100	53.223	ENSSSCG00000035693	POLRMT	83	53.359	Sus_scrofa
ENSTNIG00000010642	polrmt	96	60.264	ENSTGUG00000000621	POLRMT	100	60.366	Taeniopygia_guttata
ENSTNIG00000010642	polrmt	100	85.827	ENSTRUG00000018040	polrmt	80	87.024	Takifugu_rubripes
ENSTNIG00000010642	polrmt	58	52.381	ENSTBEG00000001819	-	91	53.347	Tupaia_belangeri
ENSTNIG00000010642	polrmt	80	64.651	ENSTTRG00000011329	POLRMT	65	64.789	Tursiops_truncatus
ENSTNIG00000010642	polrmt	100	51.961	ENSUAMG00000019616	POLRMT	82	51.961	Ursus_americanus
ENSTNIG00000010642	polrmt	100	49.806	ENSVVUG00000022627	POLRMT	84	49.806	Vulpes_vulpes
ENSTNIG00000010642	polrmt	100	64.665	ENSXETG00000006545	polrmt	83	64.665	Xenopus_tropicalis
ENSTNIG00000010642	polrmt	100	83.826	ENSXMAG00000012464	polrmt	80	81.657	Xiphophorus_maculatus