EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000010712 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 18627 bases
Position: chr14:9838904-9857530
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013630	XRN_N	PF03159.18	7.3e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013824	-	2856	-	ENSTNIP00000013630	951 (aa)	-	H3CZE5

Gene Model

Click here to download ENSTNIG00000010712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010712	xrn2	100	71.340	ENSG00000088930	XRN2	100	71.340	Homo_sapiens
ENSTNIG00000010712	xrn2	91	85.371	ENSAPOG00000009818	xrn2	100	78.947	Acanthochromis_polyacanthus
ENSTNIG00000010712	xrn2	100	71.132	ENSAMEG00000012581	XRN2	100	71.132	Ailuropoda_melanoleuca
ENSTNIG00000010712	xrn2	90	80.385	ENSACIG00000015047	xrn2	95	84.291	Amphilophus_citrinellus
ENSTNIG00000010712	xrn2	91	85.959	ENSAOCG00000023632	xrn2	100	79.492	Amphiprion_ocellaris
ENSTNIG00000010712	xrn2	91	85.845	ENSAPEG00000014871	xrn2	100	79.171	Amphiprion_percula
ENSTNIG00000010712	xrn2	91	85.666	ENSATEG00000001273	xrn2	91	85.666	Anabas_testudineus
ENSTNIG00000010712	xrn2	95	70.044	ENSAPLG00000013869	XRN2	100	69.231	Anas_platyrhynchos
ENSTNIG00000010712	xrn2	100	68.159	ENSACAG00000005565	XRN2	100	68.159	Anolis_carolinensis
ENSTNIG00000010712	xrn2	100	71.340	ENSANAG00000020126	XRN2	100	71.340	Aotus_nancymaae
ENSTNIG00000010712	xrn2	90	84.041	ENSACLG00000010522	xrn2	98	84.041	Astatotilapia_calliptera
ENSTNIG00000010712	xrn2	100	75.455	ENSAMXG00000018301	xrn2	100	75.455	Astyanax_mexicanus
ENSTNIG00000010712	xrn2	100	70.643	ENSBTAG00000011304	XRN2	100	70.643	Bos_taurus
ENSTNIG00000010712	xrn2	86	53.909	WBGene00006964	xrn-2	93	51.987	Caenorhabditis_elegans
ENSTNIG00000010712	xrn2	100	71.132	ENSCJAG00000005611	XRN2	100	71.132	Callithrix_jacchus
ENSTNIG00000010712	xrn2	100	71.236	ENSCAFG00000005185	XRN2	100	71.236	Canis_familiaris
ENSTNIG00000010712	xrn2	100	71.236	ENSCAFG00020027479	XRN2	100	71.236	Canis_lupus_dingo
ENSTNIG00000010712	xrn2	100	70.539	ENSCHIG00000006921	XRN2	100	70.539	Capra_hircus
ENSTNIG00000010712	xrn2	100	70.998	ENSTSYG00000008315	XRN2	100	70.998	Carlito_syrichta
ENSTNIG00000010712	xrn2	97	60.321	ENSCAPG00000010773	XRN2	99	59.786	Cavia_aperea
ENSTNIG00000010712	xrn2	100	71.443	ENSCPOG00000009407	XRN2	100	71.443	Cavia_porcellus
ENSTNIG00000010712	xrn2	100	71.236	ENSCATG00000040350	XRN2	100	71.236	Cercocebus_atys
ENSTNIG00000010712	xrn2	100	71.132	ENSCLAG00000013419	XRN2	100	71.132	Chinchilla_lanigera
ENSTNIG00000010712	xrn2	100	71.236	ENSCSAG00000011094	XRN2	100	71.236	Chlorocebus_sabaeus
ENSTNIG00000010712	xrn2	60	87.234	ENSCHOG00000013404	XRN2	63	87.234	Choloepus_hoffmanni
ENSTNIG00000010712	xrn2	98	70.539	ENSCPBG00000023533	XRN2	100	69.512	Chrysemys_picta_bellii
ENSTNIG00000010712	xrn2	86	60.024	ENSCING00000022336	-	100	61.098	Ciona_intestinalis
ENSTNIG00000010712	xrn2	89	58.382	ENSCSAVG00000011217	-	100	63.550	Ciona_savignyi
ENSTNIG00000010712	xrn2	100	71.236	ENSCANG00000040240	XRN2	100	71.236	Colobus_angolensis_palliatus
ENSTNIG00000010712	xrn2	97	72.727	ENSCGRG00001010676	Xrn2	99	72.727	Cricetulus_griseus_chok1gshd
ENSTNIG00000010712	xrn2	97	70.940	ENSCGRG00000006378	Xrn2	99	71.047	Cricetulus_griseus_crigri
ENSTNIG00000010712	xrn2	53	82.480	ENSCSEG00000005628	xrn2	100	81.299	Cynoglossus_semilaevis
ENSTNIG00000010712	xrn2	90	80.974	ENSCVAG00000018999	xrn2	98	87.619	Cyprinodon_variegatus
ENSTNIG00000010712	xrn2	100	74.414	ENSDARG00000101900	xrn2	96	83.969	Danio_rerio
ENSTNIG00000010712	xrn2	100	71.132	ENSDNOG00000001895	XRN2	100	71.132	Dasypus_novemcinctus
ENSTNIG00000010712	xrn2	100	69.886	ENSDORG00000005434	Xrn2	100	69.886	Dipodomys_ordii
ENSTNIG00000010712	xrn2	86	56.744	FBgn0031868	Rat1	91	55.673	Drosophila_melanogaster
ENSTNIG00000010712	xrn2	92	81.598	ENSETEG00000001740	XRN2	92	81.598	Echinops_telfairi
ENSTNIG00000010712	xrn2	84	68.689	ENSEBUG00000016136	xrn2	100	68.689	Eptatretus_burgeri
ENSTNIG00000010712	xrn2	100	71.236	ENSEASG00005002484	XRN2	100	71.236	Equus_asinus_asinus
ENSTNIG00000010712	xrn2	94	92.308	ENSECAG00000018988	XRN2	96	92.308	Equus_caballus
ENSTNIG00000010712	xrn2	66	96.000	ENSEEUG00000009265	XRN2	66	96.000	Erinaceus_europaeus
ENSTNIG00000010712	xrn2	100	75.798	ENSELUG00000000552	xrn2	100	76.434	Esox_lucius
ENSTNIG00000010712	xrn2	100	70.924	ENSFCAG00000007970	XRN2	100	70.924	Felis_catus
ENSTNIG00000010712	xrn2	97	70.833	ENSFALG00000004508	XRN2	100	69.547	Ficedula_albicollis
ENSTNIG00000010712	xrn2	100	71.236	ENSFDAG00000016311	XRN2	100	71.236	Fukomys_damarensis
ENSTNIG00000010712	xrn2	53	79.008	ENSFHEG00000013039	xrn2	98	79.008	Fundulus_heteroclitus
ENSTNIG00000010712	xrn2	86	80.488	ENSGMOG00000013436	xrn2	100	79.512	Gadus_morhua
ENSTNIG00000010712	xrn2	100	69.731	ENSGALG00000008372	XRN2	100	69.731	Gallus_gallus
ENSTNIG00000010712	xrn2	90	82.648	ENSGAFG00000014284	xrn2	99	82.648	Gambusia_affinis
ENSTNIG00000010712	xrn2	87	83.595	ENSGACG00000011870	xrn2	100	83.474	Gasterosteus_aculeatus
ENSTNIG00000010712	xrn2	98	70.539	ENSGAGG00000004884	XRN2	100	69.561	Gopherus_agassizii
ENSTNIG00000010712	xrn2	100	71.236	ENSGGOG00000013738	XRN2	100	71.236	Gorilla_gorilla
ENSTNIG00000010712	xrn2	54	83.877	ENSHBUG00000005077	xrn2	94	83.877	Haplochromis_burtoni
ENSTNIG00000010712	xrn2	100	70.613	ENSHGLG00000014831	XRN2	100	70.613	Heterocephalus_glaber_female
ENSTNIG00000010712	xrn2	100	70.613	ENSHGLG00100013130	XRN2	100	70.613	Heterocephalus_glaber_male
ENSTNIG00000010712	xrn2	99	77.495	ENSHCOG00000011994	xrn2	94	82.619	Hippocampus_comes
ENSTNIG00000010712	xrn2	100	73.742	ENSIPUG00000006639	xrn2	100	73.642	Ictalurus_punctatus
ENSTNIG00000010712	xrn2	100	71.443	ENSSTOG00000000589	XRN2	100	71.443	Ictidomys_tridecemlineatus
ENSTNIG00000010712	xrn2	100	71.488	ENSJJAG00000022128	Xrn2	100	71.488	Jaculus_jaculus
ENSTNIG00000010712	xrn2	53	89.370	ENSLBEG00000010041	xrn2	100	89.370	Labrus_bergylta
ENSTNIG00000010712	xrn2	86	74.667	ENSLACG00000008307	XRN2	97	75.528	Latimeria_chalumnae
ENSTNIG00000010712	xrn2	99	71.429	ENSLOCG00000016874	xrn2	93	79.648	Lepisosteus_oculatus
ENSTNIG00000010712	xrn2	100	70.868	ENSLAFG00000014624	XRN2	100	70.868	Loxodonta_africana
ENSTNIG00000010712	xrn2	100	71.236	ENSMFAG00000038122	XRN2	100	71.236	Macaca_fascicularis
ENSTNIG00000010712	xrn2	100	71.236	ENSMMUG00000011405	XRN2	100	71.236	Macaca_mulatta
ENSTNIG00000010712	xrn2	100	71.132	ENSMNEG00000040626	XRN2	100	71.132	Macaca_nemestrina
ENSTNIG00000010712	xrn2	100	71.132	ENSMLEG00000041897	XRN2	100	71.132	Mandrillus_leucophaeus
ENSTNIG00000010712	xrn2	91	87.384	ENSMAMG00000008633	xrn2	91	87.384	Mastacembelus_armatus
ENSTNIG00000010712	xrn2	90	85.878	ENSMZEG00005022362	xrn2	98	85.878	Maylandia_zebra
ENSTNIG00000010712	xrn2	98	70.351	ENSMGAG00000003196	XRN2	94	72.808	Meleagris_gallopavo
ENSTNIG00000010712	xrn2	100	71.904	ENSMAUG00000021842	Xrn2	100	71.904	Mesocricetus_auratus
ENSTNIG00000010712	xrn2	100	70.820	ENSMICG00000008126	XRN2	100	70.820	Microcebus_murinus
ENSTNIG00000010712	xrn2	100	71.651	ENSMOCG00000012588	Xrn2	100	71.651	Microtus_ochrogaster
ENSTNIG00000010712	xrn2	90	85.747	ENSMMOG00000017576	xrn2	97	85.650	Mola_mola
ENSTNIG00000010712	xrn2	100	71.028	ENSMODG00000006163	XRN2	100	71.028	Monodelphis_domestica
ENSTNIG00000010712	xrn2	90	83.977	ENSMALG00000011355	xrn2	99	83.977	Monopterus_albus
ENSTNIG00000010712	xrn2	100	71.696	MGP_CAROLIEiJ_G0024400	Xrn2	100	71.696	Mus_caroli
ENSTNIG00000010712	xrn2	100	71.904	ENSMUSG00000027433	Xrn2	100	71.904	Mus_musculus
ENSTNIG00000010712	xrn2	100	71.592	MGP_PahariEiJ_G0025843	Xrn2	100	71.592	Mus_pahari
ENSTNIG00000010712	xrn2	100	71.904	MGP_SPRETEiJ_G0025318	Xrn2	94	89.109	Mus_spretus
ENSTNIG00000010712	xrn2	100	69.898	ENSMPUG00000001198	XRN2	93	69.898	Mustela_putorius_furo
ENSTNIG00000010712	xrn2	100	70.998	ENSMLUG00000001536	XRN2	100	70.894	Myotis_lucifugus
ENSTNIG00000010712	xrn2	100	71.755	ENSNGAG00000018138	Xrn2	100	71.755	Nannospalax_galili
ENSTNIG00000010712	xrn2	90	85.977	ENSNBRG00000008062	xrn2	98	85.977	Neolamprologus_brichardi
ENSTNIG00000010712	xrn2	100	71.236	ENSNLEG00000009991	XRN2	100	71.236	Nomascus_leucogenys
ENSTNIG00000010712	xrn2	52	91.111	ENSMEUG00000008622	-	53	91.111	Notamacropus_eugenii
ENSTNIG00000010712	xrn2	75	71.875	ENSOPRG00000001397	-	77	71.875	Ochotona_princeps
ENSTNIG00000010712	xrn2	98	64.561	ENSODEG00000000860	-	99	64.775	Octodon_degus
ENSTNIG00000010712	xrn2	100	70.924	ENSODEG00000010745	-	100	70.924	Octodon_degus
ENSTNIG00000010712	xrn2	100	78.660	ENSONIG00000018720	xrn2	100	79.403	Oreochromis_niloticus
ENSTNIG00000010712	xrn2	100	70.374	ENSOANG00000015673	XRN2	100	70.374	Ornithorhynchus_anatinus
ENSTNIG00000010712	xrn2	100	71.340	ENSOCUG00000013468	XRN2	100	71.340	Oryctolagus_cuniculus
ENSTNIG00000010712	xrn2	91	82.386	ENSORLG00000017213	xrn2	98	82.818	Oryzias_latipes
ENSTNIG00000010712	xrn2	93	80.485	ENSORLG00020001824	xrn2	100	76.758	Oryzias_latipes_hni
ENSTNIG00000010712	xrn2	94	80.044	ENSORLG00015019747	xrn2	100	76.118	Oryzias_latipes_hsok
ENSTNIG00000010712	xrn2	91	82.045	ENSOMEG00000019820	xrn2	100	76.602	Oryzias_melastigma
ENSTNIG00000010712	xrn2	100	71.369	ENSOGAG00000001068	XRN2	100	71.369	Otolemur_garnettii
ENSTNIG00000010712	xrn2	97	69.936	ENSOARG00000004443	XRN2	99	69.936	Ovis_aries
ENSTNIG00000010712	xrn2	100	71.236	ENSPPAG00000033549	XRN2	100	71.236	Pan_paniscus
ENSTNIG00000010712	xrn2	100	70.924	ENSPPRG00000008732	XRN2	100	70.924	Panthera_pardus
ENSTNIG00000010712	xrn2	97	70.331	ENSPTIG00000015683	XRN2	97	70.331	Panthera_tigris_altaica
ENSTNIG00000010712	xrn2	100	71.236	ENSPTRG00000013308	XRN2	100	71.236	Pan_troglodytes
ENSTNIG00000010712	xrn2	100	71.236	ENSPANG00000018088	XRN2	100	71.236	Papio_anubis
ENSTNIG00000010712	xrn2	100	74.512	ENSPKIG00000016889	xrn2	100	74.082	Paramormyrops_kingsleyae
ENSTNIG00000010712	xrn2	80	75.290	ENSPSIG00000014666	XRN2	100	75.290	Pelodiscus_sinensis
ENSTNIG00000010712	xrn2	100	71.547	ENSPEMG00000000111	Xrn2	100	71.547	Peromyscus_maniculatus_bairdii
ENSTNIG00000010712	xrn2	100	76.788	ENSPFOG00000004182	xrn2	99	76.176	Poecilia_formosa
ENSTNIG00000010712	xrn2	90	82.514	ENSPLAG00000007351	xrn2	98	82.514	Poecilia_latipinna
ENSTNIG00000010712	xrn2	94	75.190	ENSPMEG00000011798	xrn2	99	74.518	Poecilia_mexicana
ENSTNIG00000010712	xrn2	96	78.036	ENSPREG00000012452	xrn2	98	81.993	Poecilia_reticulata
ENSTNIG00000010712	xrn2	100	70.924	ENSPPYG00000010755	XRN2	100	70.924	Pongo_abelii
ENSTNIG00000010712	xrn2	100	67.113	ENSPCAG00000011191	XRN2	100	67.113	Procavia_capensis
ENSTNIG00000010712	xrn2	100	65.005	ENSPCOG00000016468	XRN2	100	65.005	Propithecus_coquereli
ENSTNIG00000010712	xrn2	93	67.568	ENSPVAG00000004596	XRN2	93	67.568	Pteropus_vampyrus
ENSTNIG00000010712	xrn2	90	84.041	ENSPNYG00000001765	xrn2	98	84.041	Pundamilia_nyererei
ENSTNIG00000010712	xrn2	100	74.063	ENSPNAG00000010956	xrn2	99	74.063	Pygocentrus_nattereri
ENSTNIG00000010712	xrn2	100	71.859	ENSRNOG00000011785	Xrn2	100	71.859	Rattus_norvegicus
ENSTNIG00000010712	xrn2	86	76.642	ENSRBIG00000036193	XRN2	100	76.642	Rhinopithecus_bieti
ENSTNIG00000010712	xrn2	100	71.236	ENSRROG00000044400	XRN2	90	71.236	Rhinopithecus_roxellana
ENSTNIG00000010712	xrn2	72	52.125	YOR048C	RAT1	64	53.865	Saccharomyces_cerevisiae
ENSTNIG00000010712	xrn2	100	71.340	ENSSBOG00000021014	XRN2	100	71.340	Saimiri_boliviensis_boliviensis
ENSTNIG00000010712	xrn2	100	75.869	ENSSFOG00015001091	xrn2	100	75.869	Scleropages_formosus
ENSTNIG00000010712	xrn2	91	83.694	ENSSMAG00000007834	xrn2	100	75.755	Scophthalmus_maximus
ENSTNIG00000010712	xrn2	91	83.202	ENSSDUG00000012802	xrn2	99	84.109	Seriola_dumerili
ENSTNIG00000010712	xrn2	91	87.630	ENSSLDG00000021273	xrn2	99	87.630	Seriola_lalandi_dorsalis
ENSTNIG00000010712	xrn2	76	96.000	ENSSARG00000005859	-	76	96.000	Sorex_araneus
ENSTNIG00000010712	xrn2	89	71.875	ENSSPUG00000005485	XRN2	88	71.875	Sphenodon_punctatus
ENSTNIG00000010712	xrn2	91	85.160	ENSSPAG00000016027	xrn2	99	79.282	Stegastes_partitus
ENSTNIG00000010712	xrn2	100	69.886	ENSSSCG00000007109	XRN2	100	69.886	Sus_scrofa
ENSTNIG00000010712	xrn2	97	69.691	ENSTGUG00000007535	XRN2	100	68.345	Taeniopygia_guttata
ENSTNIG00000010712	xrn2	91	93.642	ENSTRUG00000015489	xrn2	100	85.816	Takifugu_rubripes
ENSTNIG00000010712	xrn2	100	70.717	ENSTBEG00000004119	XRN2	100	70.717	Tupaia_belangeri
ENSTNIG00000010712	xrn2	93	79.785	ENSTTRG00000009087	XRN2	93	79.785	Tursiops_truncatus
ENSTNIG00000010712	xrn2	100	71.132	ENSUAMG00000024634	XRN2	100	71.132	Ursus_americanus
ENSTNIG00000010712	xrn2	97	70.544	ENSUMAG00000004012	XRN2	95	70.544	Ursus_maritimus
ENSTNIG00000010712	xrn2	89	65.965	ENSVPAG00000010694	XRN2	91	65.965	Vicugna_pacos
ENSTNIG00000010712	xrn2	100	71.236	ENSVVUG00000012178	XRN2	100	71.236	Vulpes_vulpes
ENSTNIG00000010712	xrn2	100	70.600	ENSXETG00000023501	xrn2	100	70.600	Xenopus_tropicalis
ENSTNIG00000010712	xrn2	100	76.797	ENSXMAG00000000242	xrn2	92	87.651	Xiphophorus_maculatus