EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000010760 (Gene tree)
Gene ID: -
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 10721 bases
Position: chrUn_random:92017019-92027739
Accession: ZDB-GENE-050419-256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006543	ResIII	PF04851.15	3e-07	1	1
ENSTNIP00000013680	ResIII	PF04851.15	4.7e-07	1	1
ENSTNIP00000001280	ResIII	PF04851.15	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013874	-	4824	-	ENSTNIP00000013680	1607 (aa)	-	H3CZJ4
ENSTNIT00000006693	-	4020	-	ENSTNIP00000006543	1340 (aa)	-	H3CE69
ENSTNIT00000002777	-	3930	-	ENSTNIP00000001280	1310 (aa)	-	H3BZ64

Gene Model

Click here to download ENSTNIG00000010760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000010760	chd2	82	67.102	ENSTNIG00000007101	chd1	83	67.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010760	chd2	97	73.008	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSTNIG00000010760	chd2	98	87.946	ENSAPOG00000008913	chd2	89	87.798	Acanthochromis_polyacanthus
ENSTNIG00000010760	chd2	85	71.084	ENSAMEG00000010805	-	98	73.812	Ailuropoda_melanoleuca
ENSTNIG00000010760	chd2	96	88.036	ENSAOCG00000016332	chd2	89	88.157	Amphiprion_ocellaris
ENSTNIG00000010760	chd2	96	89.478	ENSAPEG00000016676	chd2	87	89.583	Amphiprion_percula
ENSTNIG00000010760	chd2	96	89.191	ENSATEG00000005246	chd2	87	89.079	Anabas_testudineus
ENSTNIG00000010760	chd2	97	74.044	ENSAPLG00000011141	-	87	73.829	Anas_platyrhynchos
ENSTNIG00000010760	chd2	94	71.097	ENSACAG00000000088	-	87	70.932	Anolis_carolinensis
ENSTNIG00000010760	chd2	97	73.083	ENSANAG00000024017	-	88	72.504	Aotus_nancymaae
ENSTNIG00000010760	chd2	97	85.659	ENSACLG00000021370	chd2	88	91.667	Astatotilapia_calliptera
ENSTNIG00000010760	chd2	63	80.680	ENSBTAG00000017776	CHD2	99	81.227	Bos_taurus
ENSTNIG00000010760	chd2	98	71.961	ENSCJAG00000020444	-	88	72.409	Callithrix_jacchus
ENSTNIG00000010760	chd2	99	72.146	ENSCAFG00000010998	CHD2	96	73.174	Canis_familiaris
ENSTNIG00000010760	chd2	98	70.846	ENSCHIG00000022261	-	86	71.898	Capra_hircus
ENSTNIG00000010760	chd2	98	72.003	ENSTSYG00000003272	-	86	73.398	Carlito_syrichta
ENSTNIG00000010760	chd2	89	72.946	ENSCPOG00000005800	-	88	71.795	Cavia_porcellus
ENSTNIG00000010760	chd2	98	72.782	ENSCCAG00000035304	-	87	73.154	Cebus_capucinus
ENSTNIG00000010760	chd2	97	73.008	ENSCATG00000031069	-	86	73.249	Cercocebus_atys
ENSTNIG00000010760	chd2	98	72.355	ENSCLAG00000016269	-	86	72.876	Chinchilla_lanigera
ENSTNIG00000010760	chd2	97	73.008	ENSCSAG00000017007	-	86	73.249	Chlorocebus_sabaeus
ENSTNIG00000010760	chd2	82	75.676	ENSCHOG00000000608	-	63	79.046	Choloepus_hoffmanni
ENSTNIG00000010760	chd2	81	76.692	ENSCPBG00000018049	-	95	81.406	Chrysemys_picta_bellii
ENSTNIG00000010760	chd2	85	56.476	ENSCSAVG00000007580	-	93	58.712	Ciona_savignyi
ENSTNIG00000010760	chd2	98	72.876	ENSCANG00000038126	-	87	73.229	Colobus_angolensis_palliatus
ENSTNIG00000010760	chd2	97	73.158	ENSCGRG00001006649	Chd2	86	73.323	Cricetulus_griseus_chok1gshd
ENSTNIG00000010760	chd2	97	73.158	ENSCGRG00000018154	Chd2	86	73.323	Cricetulus_griseus_crigri
ENSTNIG00000010760	chd2	98	83.168	ENSCSEG00000003646	chd2	83	91.589	Cynoglossus_semilaevis
ENSTNIG00000010760	chd2	99	82.853	ENSCVAG00000002427	chd2	89	83.905	Cyprinodon_variegatus
ENSTNIG00000010760	chd2	97	81.226	ENSDARG00000060687	chd2	88	82.511	Danio_rerio
ENSTNIG00000010760	chd2	97	72.782	ENSDNOG00000009796	-	86	73.174	Dasypus_novemcinctus
ENSTNIG00000010760	chd2	63	69.693	ENSEBUG00000014994	chd2	71	70.153	Eptatretus_burgeri
ENSTNIG00000010760	chd2	98	72.802	ENSEASG00005015526	-	89	77.577	Equus_asinus_asinus
ENSTNIG00000010760	chd2	98	80.984	ENSELUG00000017981	chd2	87	81.385	Esox_lucius
ENSTNIG00000010760	chd2	94	74.419	ENSFALG00000010369	-	86	74.162	Ficedula_albicollis
ENSTNIG00000010760	chd2	98	72.578	ENSFDAG00000020651	-	86	73.100	Fukomys_damarensis
ENSTNIG00000010760	chd2	86	85.840	ENSFHEG00000002119	chd2	87	85.000	Fundulus_heteroclitus
ENSTNIG00000010760	chd2	98	80.819	ENSGMOG00000002890	chd2	85	82.998	Gadus_morhua
ENSTNIG00000010760	chd2	96	73.068	ENSGALG00000006949	CHD2	86	73.086	Gallus_gallus
ENSTNIG00000010760	chd2	95	85.508	ENSGAFG00000001905	chd2	85	86.017	Gambusia_affinis
ENSTNIG00000010760	chd2	97	84.439	ENSGACG00000013246	chd2	85	86.931	Gasterosteus_aculeatus
ENSTNIG00000010760	chd2	81	78.081	ENSGAGG00000013176	-	98	81.829	Gopherus_agassizii
ENSTNIG00000010760	chd2	98	71.994	ENSGGOG00000015677	CHD2	88	72.367	Gorilla_gorilla
ENSTNIG00000010760	chd2	96	89.294	ENSHBUG00000017947	chd2	88	91.667	Haplochromis_burtoni
ENSTNIG00000010760	chd2	98	72.429	ENSHGLG00000004435	CHD2	86	72.951	Heterocephalus_glaber_female
ENSTNIG00000010760	chd2	98	71.759	ENSHGLG00100016376	-	86	72.280	Heterocephalus_glaber_male
ENSTNIG00000010760	chd2	99	85.663	ENSHCOG00000008855	chd2	83	85.651	Hippocampus_comes
ENSTNIG00000010760	chd2	98	78.337	ENSIPUG00000000488	chd2	89	78.770	Ictalurus_punctatus
ENSTNIG00000010760	chd2	97	72.953	ENSSTOG00000001270	-	86	73.547	Ictidomys_tridecemlineatus
ENSTNIG00000010760	chd2	98	71.620	ENSJJAG00000000213	Chd2	86	72.660	Jaculus_jaculus
ENSTNIG00000010760	chd2	79	88.150	ENSKMAG00000015849	chd2	85	88.643	Kryptolebias_marmoratus
ENSTNIG00000010760	chd2	95	73.218	ENSLAFG00000016885	-	97	80.869	Loxodonta_africana
ENSTNIG00000010760	chd2	98	72.876	ENSMFAG00000033343	-	86	73.249	Macaca_fascicularis
ENSTNIG00000010760	chd2	97	73.008	ENSMMUG00000011782	-	86	73.249	Macaca_mulatta
ENSTNIG00000010760	chd2	97	72.673	ENSMNEG00000036875	-	87	72.485	Macaca_nemestrina
ENSTNIG00000010760	chd2	97	73.008	ENSMLEG00000035026	-	87	72.815	Mandrillus_leucophaeus
ENSTNIG00000010760	chd2	96	89.023	ENSMAMG00000009082	chd2	87	89.054	Mastacembelus_armatus
ENSTNIG00000010760	chd2	97	85.659	ENSMZEG00005021333	chd2	88	91.753	Maylandia_zebra
ENSTNIG00000010760	chd2	97	72.862	ENSMGAG00000008966	-	87	73.011	Meleagris_gallopavo
ENSTNIG00000010760	chd2	98	71.908	ENSMICG00000000332	-	87	72.206	Microcebus_murinus
ENSTNIG00000010760	chd2	97	73.083	ENSMOCG00000015124	Chd2	86	73.472	Microtus_ochrogaster
ENSTNIG00000010760	chd2	97	74.138	ENSMODG00000013158	-	87	74.294	Monodelphis_domestica
ENSTNIG00000010760	chd2	96	85.562	ENSMALG00000007755	chd2	86	85.586	Monopterus_albus
ENSTNIG00000010760	chd2	97	73.008	MGP_CAROLIEiJ_G0029860	Chd2	86	73.323	Mus_caroli
ENSTNIG00000010760	chd2	98	72.951	ENSMUSG00000078671	Chd2	86	73.398	Mus_musculus
ENSTNIG00000010760	chd2	97	73.158	MGP_PahariEiJ_G0013082	Chd2	87	73.472	Mus_pahari
ENSTNIG00000010760	chd2	97	73.083	MGP_SPRETEiJ_G0030962	Chd2	86	73.398	Mus_spretus
ENSTNIG00000010760	chd2	98	71.875	ENSMPUG00000017577	-	86	73.249	Mustela_putorius_furo
ENSTNIG00000010760	chd2	98	72.754	ENSMLUG00000009292	-	86	73.105	Myotis_lucifugus
ENSTNIG00000010760	chd2	97	72.707	ENSNGAG00000010792	Chd2	86	72.951	Nannospalax_galili
ENSTNIG00000010760	chd2	96	86.778	ENSNBRG00000020591	chd2	85	91.667	Neolamprologus_brichardi
ENSTNIG00000010760	chd2	97	70.987	ENSNLEG00000012349	-	87	70.359	Nomascus_leucogenys
ENSTNIG00000010760	chd2	77	75.718	ENSMEUG00000001522	-	64	76.110	Notamacropus_eugenii
ENSTNIG00000010760	chd2	98	71.083	ENSODEG00000016028	-	86	72.355	Octodon_degus
ENSTNIG00000010760	chd2	97	89.173	ENSONIG00000015136	chd2	87	89.478	Oreochromis_niloticus
ENSTNIG00000010760	chd2	81	76.146	ENSOANG00000004385	-	86	75.067	Ornithorhynchus_anatinus
ENSTNIG00000010760	chd2	97	72.068	ENSOCUG00000001628	-	98	74.709	Oryctolagus_cuniculus
ENSTNIG00000010760	chd2	96	86.233	ENSORLG00000008403	chd2	96	88.785	Oryzias_latipes
ENSTNIG00000010760	chd2	96	86.515	ENSORLG00020004138	chd2	87	87.481	Oryzias_latipes_hni
ENSTNIG00000010760	chd2	50	81.532	ENSORLG00015017721	chd2	96	89.815	Oryzias_latipes_hsok
ENSTNIG00000010760	chd2	99	81.075	ENSOMEG00000005831	chd2	87	82.028	Oryzias_melastigma
ENSTNIG00000010760	chd2	97	70.602	ENSOGAG00000010399	-	86	71.013	Otolemur_garnettii
ENSTNIG00000010760	chd2	99	71.739	ENSOARG00000010343	-	86	73.105	Ovis_aries
ENSTNIG00000010760	chd2	98	71.152	ENSPPAG00000030381	-	89	71.545	Pan_paniscus
ENSTNIG00000010760	chd2	98	72.057	ENSPTRG00000007478	CHD2	88	72.429	Pan_troglodytes
ENSTNIG00000010760	chd2	97	69.323	ENSPANG00000033355	-	87	68.778	Papio_anubis
ENSTNIG00000010760	chd2	97	81.545	ENSPKIG00000000495	chd2	88	82.340	Paramormyrops_kingsleyae
ENSTNIG00000010760	chd2	80	85.498	ENSPMGG00000009941	chd2	85	86.351	Periophthalmus_magnuspinnatus
ENSTNIG00000010760	chd2	97	73.158	ENSPEMG00000019507	Chd2	86	73.398	Peromyscus_maniculatus_bairdii
ENSTNIG00000010760	chd2	89	76.047	ENSPCIG00000009417	-	100	66.620	Phascolarctos_cinereus
ENSTNIG00000010760	chd2	96	87.936	ENSPFOG00000007050	chd2	87	88.731	Poecilia_formosa
ENSTNIG00000010760	chd2	57	67.290	ENSPFOG00000000291	-	96	60.699	Poecilia_formosa
ENSTNIG00000010760	chd2	96	88.088	ENSPLAG00000005067	chd2	87	88.806	Poecilia_latipinna
ENSTNIG00000010760	chd2	96	88.012	ENSPMEG00000019628	chd2	87	88.806	Poecilia_mexicana
ENSTNIG00000010760	chd2	97	71.278	ENSPPYG00000006799	-	86	71.535	Pongo_abelii
ENSTNIG00000010760	chd2	97	73.158	ENSPCOG00000028084	-	86	73.547	Propithecus_coquereli
ENSTNIG00000010760	chd2	97	85.505	ENSPNYG00000010273	chd2	88	91.753	Pundamilia_nyererei
ENSTNIG00000010760	chd2	99	76.300	ENSPNAG00000016719	chd2	90	77.273	Pygocentrus_nattereri
ENSTNIG00000010760	chd2	98	73.174	ENSRNOG00000012716	Chd2	87	73.017	Rattus_norvegicus
ENSTNIG00000010760	chd2	98	72.897	ENSRBIG00000036875	-	88	73.289	Rhinopithecus_bieti
ENSTNIG00000010760	chd2	98	72.816	ENSRROG00000041087	-	87	73.189	Rhinopithecus_roxellana
ENSTNIG00000010760	chd2	98	72.036	ENSSBOG00000023754	-	88	72.409	Saimiri_boliviensis_boliviensis
ENSTNIG00000010760	chd2	97	74.213	ENSSHAG00000012513	-	87	74.443	Sarcophilus_harrisii
ENSTNIG00000010760	chd2	97	84.403	ENSSFOG00015023759	chd2	88	84.851	Scleropages_formosus
ENSTNIG00000010760	chd2	96	88.805	ENSSMAG00000001726	chd2	87	88.996	Scophthalmus_maximus
ENSTNIG00000010760	chd2	97	89.555	ENSSLDG00000001146	chd2	88	86.973	Seriola_lalandi_dorsalis
ENSTNIG00000010760	chd2	79	80.000	ENSSARG00000014112	-	71	80.000	Sorex_araneus
ENSTNIG00000010760	chd2	99	72.070	ENSSPUG00000011266	-	88	71.970	Sphenodon_punctatus
ENSTNIG00000010760	chd2	96	86.844	ENSSPAG00000016452	chd2	73	85.627	Stegastes_partitus
ENSTNIG00000010760	chd2	97	72.932	ENSSSCG00000002266	-	86	77.869	Sus_scrofa
ENSTNIG00000010760	chd2	94	74.126	ENSTGUG00000008540	-	86	73.806	Taeniopygia_guttata
ENSTNIG00000010760	chd2	99	89.218	ENSTRUG00000008842	chd2	81	88.538	Takifugu_rubripes
ENSTNIG00000010760	chd2	92	73.684	ENSTBEG00000017730	-	74	73.684	Tupaia_belangeri
ENSTNIG00000010760	chd2	94	73.071	ENSTTRG00000000430	-	77	74.089	Tursiops_truncatus
ENSTNIG00000010760	chd2	98	72.104	ENSUMAG00000000083	-	89	73.249	Ursus_maritimus
ENSTNIG00000010760	chd2	80	85.637	ENSVPAG00000009645	-	72	85.637	Vicugna_pacos
ENSTNIG00000010760	chd2	84	76.757	ENSXETG00000024129	chd2	81	76.297	Xenopus_tropicalis
ENSTNIG00000010760	chd2	95	89.110	ENSXCOG00000020255	chd2	90	88.335	Xiphophorus_couchianus
ENSTNIG00000010760	chd2	96	88.409	ENSXMAG00000002707	chd2	87	88.450	Xiphophorus_maculatus