EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000010773 (Gene tree)
Gene ID: -
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin 1a
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3433 bases
Position: chr7:7357114-7360546
Accession: ZDB-GENE-021028-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013697	Nucleoplasmin	PF03066.15	6.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013891	-	1460	-	ENSTNIP00000013697	291 (aa)	-	H3CZL1

Gene Model

Click here to download ENSTNIG00000010773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000010773	npm1a	96	39.792	ENSTNIG00000013057	npm1b	96	37.589

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010773	npm1a	100	72.185	ENSAPOG00000002813	npm1a	100	71.854	Acanthochromis_polyacanthus
ENSTNIG00000010773	npm1a	94	71.685	ENSACIG00000014201	npm1a	100	73.477	Amphilophus_citrinellus
ENSTNIG00000010773	npm1a	89	69.498	ENSAOCG00000004978	npm1a	100	67.181	Amphiprion_ocellaris
ENSTNIG00000010773	npm1a	100	73.913	ENSAPEG00000008594	npm1a	100	73.913	Amphiprion_percula
ENSTNIG00000010773	npm1a	100	73.955	ENSATEG00000008885	npm1a	100	72.990	Anabas_testudineus
ENSTNIG00000010773	npm1a	97	70.423	ENSACLG00000008376	npm1a	96	70.775	Astatotilapia_calliptera
ENSTNIG00000010773	npm1a	100	61.512	ENSCSEG00000011165	npm1a	100	53.265	Cynoglossus_semilaevis
ENSTNIG00000010773	npm1a	100	68.227	ENSCVAG00000008960	npm1a	100	69.231	Cyprinodon_variegatus
ENSTNIG00000010773	npm1a	98	63.066	ENSDARG00000014329	npm1a	93	73.026	Danio_rerio
ENSTNIG00000010773	npm1a	95	33.437	ENSEBUG00000012753	npm1a	91	34.675	Eptatretus_burgeri
ENSTNIG00000010773	npm1a	100	67.677	ENSELUG00000013705	npm1a	100	67.003	Esox_lucius
ENSTNIG00000010773	npm1a	100	69.868	ENSFHEG00000012496	npm1a	100	69.536	Fundulus_heteroclitus
ENSTNIG00000010773	npm1a	100	64.356	ENSGAFG00000013059	npm1a	100	64.686	Gambusia_affinis
ENSTNIG00000010773	npm1a	99	67.128	ENSGACG00000020319	npm1a	99	64.706	Gasterosteus_aculeatus
ENSTNIG00000010773	npm1a	99	68.671	ENSHBUG00000000776	npm1a	99	69.206	Haplochromis_burtoni
ENSTNIG00000010773	npm1a	100	54.305	ENSHCOG00000001059	npm1a	100	54.636	Hippocampus_comes
ENSTNIG00000010773	npm1a	98	59.532	ENSIPUG00000019452	npm1	99	59.866	Ictalurus_punctatus
ENSTNIG00000010773	npm1a	100	71.429	ENSKMAG00000010709	npm1a	100	71.088	Kryptolebias_marmoratus
ENSTNIG00000010773	npm1a	100	69.000	ENSLBEG00000008793	npm1a	100	69.333	Labrus_bergylta
ENSTNIG00000010773	npm1a	85	54.015	ENSLOCG00000009683	npm1a	100	54.015	Lepisosteus_oculatus
ENSTNIG00000010773	npm1a	100	72.819	ENSMAMG00000009344	npm1a	83	72.483	Mastacembelus_armatus
ENSTNIG00000010773	npm1a	99	69.206	ENSMZEG00005013717	npm1a	99	69.745	Maylandia_zebra
ENSTNIG00000010773	npm1a	95	74.643	ENSMMOG00000007980	npm1a	100	74.643	Mola_mola
ENSTNIG00000010773	npm1a	100	69.536	ENSMALG00000001146	npm1a	100	71.523	Monopterus_albus
ENSTNIG00000010773	npm1a	99	66.877	ENSNBRG00000013172	npm1a	100	67.192	Neolamprologus_brichardi
ENSTNIG00000010773	npm1a	99	68.771	ENSONIG00000001860	npm1a	98	69.900	Oreochromis_niloticus
ENSTNIG00000010773	npm1a	100	69.492	ENSORLG00000010179	npm1a	100	69.153	Oryzias_latipes
ENSTNIG00000010773	npm1a	100	68.367	ENSORLG00020020817	npm1a	100	68.027	Oryzias_latipes_hni
ENSTNIG00000010773	npm1a	100	69.492	ENSORLG00015003439	npm1a	100	69.153	Oryzias_latipes_hsok
ENSTNIG00000010773	npm1a	100	67.797	ENSOMEG00000007083	npm1a	100	67.797	Oryzias_melastigma
ENSTNIG00000010773	npm1a	100	53.947	ENSPKIG00000023943	npm1a	100	53.947	Paramormyrops_kingsleyae
ENSTNIG00000010773	npm1a	100	54.639	ENSPMGG00000011716	npm1a	100	54.639	Periophthalmus_magnuspinnatus
ENSTNIG00000010773	npm1a	100	66.667	ENSPFOG00000019173	npm1a	100	68.000	Poecilia_formosa
ENSTNIG00000010773	npm1a	100	67.893	ENSPLAG00000001093	npm1a	100	66.890	Poecilia_latipinna
ENSTNIG00000010773	npm1a	100	66.667	ENSPMEG00000012523	npm1a	100	68.000	Poecilia_mexicana
ENSTNIG00000010773	npm1a	100	68.439	ENSPREG00000001647	npm1a	100	68.106	Poecilia_reticulata
ENSTNIG00000010773	npm1a	99	71.061	ENSPNYG00000019321	npm1a	100	70.418	Pundamilia_nyererei
ENSTNIG00000010773	npm1a	98	60.000	ENSPNAG00000026891	npm1a	99	60.339	Pygocentrus_nattereri
ENSTNIG00000010773	npm1a	100	63.176	ENSSFOG00015007074	npm1a	100	62.162	Scleropages_formosus
ENSTNIG00000010773	npm1a	100	74.747	ENSSMAG00000019090	npm1a	100	75.084	Scophthalmus_maximus
ENSTNIG00000010773	npm1a	100	75.920	ENSSDUG00000015609	npm1a	100	75.920	Seriola_dumerili
ENSTNIG00000010773	npm1a	100	76.510	ENSSLDG00000017849	npm1a	100	76.510	Seriola_lalandi_dorsalis
ENSTNIG00000010773	npm1a	100	64.041	ENSSPAG00000021660	npm1a	100	66.096	Stegastes_partitus
ENSTNIG00000010773	npm1a	100	78.878	ENSTRUG00000024003	npm1a	100	79.868	Takifugu_rubripes
ENSTNIG00000010773	npm1a	99	63.230	ENSXCOG00000005958	npm1a	100	64.057	Xiphophorus_couchianus
ENSTNIG00000010773	npm1a	100	66.118	ENSXMAG00000000396	npm1a	100	65.461	Xiphophorus_maculatus