EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000010827 (Gene tree)
Gene ID: -
Gene Symbol: polr2f
Alias: zgc:92790
Full Name: polymerase (RNA) II (DNA directed) polypeptide F
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1256 bases
Position: chrUn_random:5666119-5667374
Accession: ZDB-GENE-040718-279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013756	RNA_pol_Rpb6	PF01192.22	8.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000013950	-	580	-	ENSTNIP00000013756	127 (aa)	-	Q4SCJ6

Gene Model

Click here to download ENSTNIG00000010827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010827's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010827	polr2f	100	89.764	ENSG00000100142	POLR2F	100	89.764	Homo_sapiens
ENSTNIG00000010827	polr2f	100	98.425	ENSAPOG00000002902	polr2f	100	98.425	Acanthochromis_polyacanthus
ENSTNIG00000010827	polr2f	100	88.976	ENSAMEG00000010331	POLR2F	100	88.976	Ailuropoda_melanoleuca
ENSTNIG00000010827	polr2f	100	98.425	ENSACIG00000000923	polr2f	100	98.425	Amphilophus_citrinellus
ENSTNIG00000010827	polr2f	100	99.213	ENSAOCG00000003182	polr2f	100	99.213	Amphiprion_ocellaris
ENSTNIG00000010827	polr2f	100	99.213	ENSAPEG00000012999	polr2f	100	99.213	Amphiprion_percula
ENSTNIG00000010827	polr2f	100	98.425	ENSATEG00000008929	polr2f	100	98.425	Anabas_testudineus
ENSTNIG00000010827	polr2f	80	90.099	ENSAPLG00000015235	POLR2F	85	89.623	Anas_platyrhynchos
ENSTNIG00000010827	polr2f	100	90.551	ENSACAG00000015288	POLR2F	100	90.551	Anolis_carolinensis
ENSTNIG00000010827	polr2f	100	89.764	ENSANAG00000020840	POLR2F	100	89.764	Aotus_nancymaae
ENSTNIG00000010827	polr2f	100	97.638	ENSACLG00000016129	polr2f	100	97.638	Astatotilapia_calliptera
ENSTNIG00000010827	polr2f	100	98.425	ENSAMXG00000012812	polr2f	100	98.425	Astyanax_mexicanus
ENSTNIG00000010827	polr2f	100	89.764	ENSBTAG00000004820	POLR2F	100	89.764	Bos_taurus
ENSTNIG00000010827	polr2f	63	77.500	WBGene00007355	rpb-6	74	66.990	Caenorhabditis_elegans
ENSTNIG00000010827	polr2f	100	89.764	ENSCJAG00000048241	POLR2F	100	89.764	Callithrix_jacchus
ENSTNIG00000010827	polr2f	100	88.976	ENSCAFG00000001437	POLR2F	100	88.976	Canis_familiaris
ENSTNIG00000010827	polr2f	83	90.566	ENSCHIG00000012907	POLR2F	83	90.566	Capra_hircus
ENSTNIG00000010827	polr2f	100	88.976	ENSTSYG00000008187	POLR2F	100	88.976	Carlito_syrichta
ENSTNIG00000010827	polr2f	83	90.566	ENSCAPG00000013419	POLR2F	83	90.566	Cavia_aperea
ENSTNIG00000010827	polr2f	100	89.764	ENSCPOG00000034094	POLR2F	100	89.764	Cavia_porcellus
ENSTNIG00000010827	polr2f	100	89.764	ENSCCAG00000036489	POLR2F	100	89.764	Cebus_capucinus
ENSTNIG00000010827	polr2f	100	89.764	ENSCATG00000041014	POLR2F	100	89.764	Cercocebus_atys
ENSTNIG00000010827	polr2f	100	89.764	ENSCLAG00000017167	POLR2F	100	89.764	Chinchilla_lanigera
ENSTNIG00000010827	polr2f	100	89.764	ENSCSAG00000006862	POLR2F	100	89.764	Chlorocebus_sabaeus
ENSTNIG00000010827	polr2f	83	91.509	ENSCPBG00000023030	POLR2F	54	91.509	Chrysemys_picta_bellii
ENSTNIG00000010827	polr2f	81	76.923	ENSCING00000019359	-	73	76.923	Ciona_intestinalis
ENSTNIG00000010827	polr2f	100	89.764	ENSCANG00000041884	POLR2F	100	89.764	Colobus_angolensis_palliatus
ENSTNIG00000010827	polr2f	100	89.764	ENSCGRG00001023541	POLR2F	100	89.764	Cricetulus_griseus_chok1gshd
ENSTNIG00000010827	polr2f	100	89.764	ENSCGRG00000011921	POLR2F	100	89.764	Cricetulus_griseus_crigri
ENSTNIG00000010827	polr2f	95	98.347	ENSCSEG00000006848	polr2f	95	98.347	Cynoglossus_semilaevis
ENSTNIG00000010827	polr2f	100	97.638	ENSCVAG00000010437	polr2f	100	97.638	Cyprinodon_variegatus
ENSTNIG00000010827	polr2f	100	96.063	ENSDARG00000036625	polr2f	100	96.063	Danio_rerio
ENSTNIG00000010827	polr2f	100	89.764	ENSDNOG00000005884	POLR2F	100	89.764	Dasypus_novemcinctus
ENSTNIG00000010827	polr2f	100	89.764	ENSDORG00000024789	Polr2f	100	89.764	Dipodomys_ordii
ENSTNIG00000010827	polr2f	78	70.588	FBgn0003275	RpII18	78	72.549	Drosophila_melanogaster
ENSTNIG00000010827	polr2f	77	67.347	ENSEBUG00000002842	-	90	64.423	Eptatretus_burgeri
ENSTNIG00000010827	polr2f	54	85.294	ENSEBUG00000008509	polr2f	70	85.294	Eptatretus_burgeri
ENSTNIG00000010827	polr2f	60	88.158	ENSEASG00005018802	-	68	88.158	Equus_asinus_asinus
ENSTNIG00000010827	polr2f	100	87.402	ENSEEUG00000011014	POLR2F	100	87.402	Erinaceus_europaeus
ENSTNIG00000010827	polr2f	100	95.276	ENSELUG00000000319	polr2f	100	95.276	Esox_lucius
ENSTNIG00000010827	polr2f	100	88.976	ENSFCAG00000002806	POLR2F	100	88.976	Felis_catus
ENSTNIG00000010827	polr2f	100	89.764	ENSFDAG00000009926	POLR2F	100	89.764	Fukomys_damarensis
ENSTNIG00000010827	polr2f	100	95.276	ENSFHEG00000005448	polr2f	100	95.276	Fundulus_heteroclitus
ENSTNIG00000010827	polr2f	100	89.764	ENSGMOG00000009967	polr2f	100	89.764	Gadus_morhua
ENSTNIG00000010827	polr2f	100	90.551	ENSGALG00000012291	POLR2F	100	90.551	Gallus_gallus
ENSTNIG00000010827	polr2f	100	96.850	ENSGAFG00000017573	polr2f	100	96.850	Gambusia_affinis
ENSTNIG00000010827	polr2f	100	92.913	ENSGACG00000007322	polr2f	100	92.913	Gasterosteus_aculeatus
ENSTNIG00000010827	polr2f	100	90.551	ENSGAGG00000021757	POLR2F	100	90.551	Gopherus_agassizii
ENSTNIG00000010827	polr2f	100	89.764	ENSGGOG00000005213	POLR2F	100	89.764	Gorilla_gorilla
ENSTNIG00000010827	polr2f	100	97.638	ENSHBUG00000022089	polr2f	100	97.638	Haplochromis_burtoni
ENSTNIG00000010827	polr2f	100	89.764	ENSHGLG00000018942	POLR2F	100	89.764	Heterocephalus_glaber_female
ENSTNIG00000010827	polr2f	100	89.764	ENSHGLG00100012851	POLR2F	100	89.764	Heterocephalus_glaber_male
ENSTNIG00000010827	polr2f	100	93.701	ENSHCOG00000006149	polr2f	100	93.701	Hippocampus_comes
ENSTNIG00000010827	polr2f	76	98.969	ENSIPUG00000000814	polr2f	100	98.969	Ictalurus_punctatus
ENSTNIG00000010827	polr2f	100	89.764	ENSSTOG00000025722	POLR2F	100	89.764	Ictidomys_tridecemlineatus
ENSTNIG00000010827	polr2f	100	89.764	ENSJJAG00000008097	Polr2f	100	89.764	Jaculus_jaculus
ENSTNIG00000010827	polr2f	100	97.638	ENSKMAG00000014230	polr2f	100	97.638	Kryptolebias_marmoratus
ENSTNIG00000010827	polr2f	94	96.667	ENSLBEG00000008383	polr2f	100	96.667	Labrus_bergylta
ENSTNIG00000010827	polr2f	100	92.126	ENSLACG00000003931	POLR2F	100	92.126	Latimeria_chalumnae
ENSTNIG00000010827	polr2f	100	96.154	ENSLOCG00000011827	polr2f	100	96.154	Lepisosteus_oculatus
ENSTNIG00000010827	polr2f	100	89.764	ENSLAFG00000012632	POLR2F	100	89.764	Loxodonta_africana
ENSTNIG00000010827	polr2f	100	89.764	ENSMFAG00000033687	POLR2F	100	89.764	Macaca_fascicularis
ENSTNIG00000010827	polr2f	83	90.566	ENSMMUG00000038231	POLR2F	87	90.566	Macaca_mulatta
ENSTNIG00000010827	polr2f	100	89.764	ENSMNEG00000044365	POLR2F	100	89.764	Macaca_nemestrina
ENSTNIG00000010827	polr2f	100	89.764	ENSMLEG00000033077	POLR2F	100	89.764	Mandrillus_leucophaeus
ENSTNIG00000010827	polr2f	100	97.638	ENSMAMG00000008056	polr2f	100	97.638	Mastacembelus_armatus
ENSTNIG00000010827	polr2f	100	97.638	ENSMZEG00005005705	polr2f	100	97.638	Maylandia_zebra
ENSTNIG00000010827	polr2f	100	90.551	ENSMGAG00000012504	POLR2F	100	90.551	Meleagris_gallopavo
ENSTNIG00000010827	polr2f	100	89.764	ENSMAUG00000018586	Polr2f	100	89.764	Mesocricetus_auratus
ENSTNIG00000010827	polr2f	100	89.764	ENSMICG00000013128	POLR2F	100	89.764	Microcebus_murinus
ENSTNIG00000010827	polr2f	100	89.764	ENSMOCG00000000237	Polr2f	100	89.764	Microtus_ochrogaster
ENSTNIG00000010827	polr2f	100	99.213	ENSMMOG00000005106	polr2f	100	99.213	Mola_mola
ENSTNIG00000010827	polr2f	100	89.764	ENSMODG00000019063	POLR2F	100	89.764	Monodelphis_domestica
ENSTNIG00000010827	polr2f	100	98.425	ENSMALG00000001444	polr2f	100	98.425	Monopterus_albus
ENSTNIG00000010827	polr2f	100	88.976	MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	Mus_caroli
ENSTNIG00000010827	polr2f	100	88.976	ENSMUSG00000033020	Polr2f	100	88.976	Mus_musculus
ENSTNIG00000010827	polr2f	100	88.976	MGP_PahariEiJ_G0020008	Polr2f	100	88.976	Mus_pahari
ENSTNIG00000010827	polr2f	100	88.976	MGP_SPRETEiJ_G0020904	Polr2f	100	88.976	Mus_spretus
ENSTNIG00000010827	polr2f	100	88.976	ENSMPUG00000012997	POLR2F	100	88.976	Mustela_putorius_furo
ENSTNIG00000010827	polr2f	100	87.597	ENSMLUG00000014315	-	100	87.597	Myotis_lucifugus
ENSTNIG00000010827	polr2f	98	83.871	ENSMLUG00000029612	-	98	83.871	Myotis_lucifugus
ENSTNIG00000010827	polr2f	100	89.764	ENSNGAG00000020682	Polr2f	100	89.764	Nannospalax_galili
ENSTNIG00000010827	polr2f	100	98.425	ENSNBRG00000002492	polr2f	100	98.425	Neolamprologus_brichardi
ENSTNIG00000010827	polr2f	100	89.764	ENSNLEG00000014987	-	100	89.764	Nomascus_leucogenys
ENSTNIG00000010827	polr2f	100	89.764	ENSODEG00000014123	POLR2F	100	89.764	Octodon_degus
ENSTNIG00000010827	polr2f	100	98.425	ENSONIG00000008394	polr2f	100	98.425	Oreochromis_niloticus
ENSTNIG00000010827	polr2f	100	90.551	ENSOANG00000014684	POLR2F	100	90.551	Ornithorhynchus_anatinus
ENSTNIG00000010827	polr2f	100	89.764	ENSOCUG00000012064	POLR2F	100	89.764	Oryctolagus_cuniculus
ENSTNIG00000010827	polr2f	100	96.850	ENSORLG00000014580	polr2f	100	96.850	Oryzias_latipes
ENSTNIG00000010827	polr2f	100	97.638	ENSORLG00020006910	polr2f	100	97.638	Oryzias_latipes_hni
ENSTNIG00000010827	polr2f	90	95.614	ENSORLG00015015332	polr2f	77	95.614	Oryzias_latipes_hsok
ENSTNIG00000010827	polr2f	80	95.098	ENSOMEG00000006530	polr2f	65	89.091	Oryzias_melastigma
ENSTNIG00000010827	polr2f	100	89.764	ENSOGAG00000025463	POLR2F	100	89.764	Otolemur_garnettii
ENSTNIG00000010827	polr2f	100	89.764	ENSOARG00000014692	POLR2F	100	89.764	Ovis_aries
ENSTNIG00000010827	polr2f	100	89.764	ENSPPAG00000024276	POLR2F	100	89.764	Pan_paniscus
ENSTNIG00000010827	polr2f	100	88.976	ENSPPRG00000013030	POLR2F	100	88.976	Panthera_pardus
ENSTNIG00000010827	polr2f	82	89.423	ENSPTIG00000000632	POLR2F	85	89.423	Panthera_tigris_altaica
ENSTNIG00000010827	polr2f	100	89.764	ENSPTRG00000014356	POLR2F	100	89.764	Pan_troglodytes
ENSTNIG00000010827	polr2f	100	89.764	ENSPANG00000023979	POLR2F	100	89.764	Papio_anubis
ENSTNIG00000010827	polr2f	100	98.425	ENSPKIG00000002464	polr2f	100	98.425	Paramormyrops_kingsleyae
ENSTNIG00000010827	polr2f	56	95.775	ENSPSIG00000013913	POLR2F	100	95.775	Pelodiscus_sinensis
ENSTNIG00000010827	polr2f	100	99.213	ENSPMGG00000009619	polr2f	100	99.213	Periophthalmus_magnuspinnatus
ENSTNIG00000010827	polr2f	100	89.764	ENSPEMG00000008322	Polr2f	100	89.764	Peromyscus_maniculatus_bairdii
ENSTNIG00000010827	polr2f	100	89.764	ENSPCIG00000012000	-	100	89.764	Phascolarctos_cinereus
ENSTNIG00000010827	polr2f	100	97.638	ENSPFOG00000000139	polr2f	100	97.638	Poecilia_formosa
ENSTNIG00000010827	polr2f	100	97.638	ENSPLAG00000000988	polr2f	100	97.638	Poecilia_latipinna
ENSTNIG00000010827	polr2f	100	97.638	ENSPMEG00000019063	polr2f	100	97.638	Poecilia_mexicana
ENSTNIG00000010827	polr2f	77	97.959	ENSPREG00000016749	polr2f	100	97.959	Poecilia_reticulata
ENSTNIG00000010827	polr2f	100	89.764	ENSPPYG00000011809	POLR2F	100	89.764	Pongo_abelii
ENSTNIG00000010827	polr2f	100	89.764	ENSPCOG00000025716	POLR2F	100	89.764	Propithecus_coquereli
ENSTNIG00000010827	polr2f	79	87.000	ENSPVAG00000010107	POLR2F	64	87.000	Pteropus_vampyrus
ENSTNIG00000010827	polr2f	100	97.638	ENSPNYG00000019790	polr2f	100	97.638	Pundamilia_nyererei
ENSTNIG00000010827	polr2f	100	99.213	ENSPNAG00000009017	polr2f	100	99.213	Pygocentrus_nattereri
ENSTNIG00000010827	polr2f	100	88.976	ENSRNOG00000011214	Polr2f	100	88.976	Rattus_norvegicus
ENSTNIG00000010827	polr2f	100	89.764	ENSRBIG00000044878	POLR2F	100	89.764	Rhinopithecus_bieti
ENSTNIG00000010827	polr2f	100	89.764	ENSRROG00000019586	POLR2F	100	89.764	Rhinopithecus_roxellana
ENSTNIG00000010827	polr2f	100	89.764	ENSSBOG00000023340	POLR2F	100	89.764	Saimiri_boliviensis_boliviensis
ENSTNIG00000010827	polr2f	100	89.764	ENSSHAG00000008502	POLR2F	100	89.764	Sarcophilus_harrisii
ENSTNIG00000010827	polr2f	100	97.638	ENSSFOG00015012810	polr2f	100	97.638	Scleropages_formosus
ENSTNIG00000010827	polr2f	100	98.425	ENSSMAG00000005354	polr2f	100	98.425	Scophthalmus_maximus
ENSTNIG00000010827	polr2f	100	99.213	ENSSDUG00000016273	polr2f	100	99.213	Seriola_dumerili
ENSTNIG00000010827	polr2f	100	99.213	ENSSLDG00000024895	polr2f	100	99.213	Seriola_lalandi_dorsalis
ENSTNIG00000010827	polr2f	100	90.551	ENSSPUG00000011343	POLR2F	100	90.551	Sphenodon_punctatus
ENSTNIG00000010827	polr2f	100	97.638	ENSSPAG00000019646	polr2f	100	97.638	Stegastes_partitus
ENSTNIG00000010827	polr2f	100	88.976	ENSSSCG00000000116	POLR2F	100	88.976	Sus_scrofa
ENSTNIG00000010827	polr2f	57	90.278	ENSTGUG00000016504	-	88	89.610	Taeniopygia_guttata
ENSTNIG00000010827	polr2f	80	91.089	ENSTGUG00000010476	POLR2F	93	89.764	Taeniopygia_guttata
ENSTNIG00000010827	polr2f	100	98.425	ENSTRUG00000021130	polr2f	71	98.425	Takifugu_rubripes
ENSTNIG00000010827	polr2f	79	87.000	ENSTTRG00000004817	POLR2F	64	87.000	Tursiops_truncatus
ENSTNIG00000010827	polr2f	100	88.976	ENSUAMG00000020504	POLR2F	100	88.976	Ursus_americanus
ENSTNIG00000010827	polr2f	100	88.976	ENSUMAG00000015052	POLR2F	100	88.976	Ursus_maritimus
ENSTNIG00000010827	polr2f	83	89.623	ENSVVUG00000024021	POLR2F	80	89.623	Vulpes_vulpes
ENSTNIG00000010827	polr2f	100	91.339	ENSXETG00000006346	polr2f	100	91.339	Xenopus_tropicalis
ENSTNIG00000010827	polr2f	100	97.638	ENSXCOG00000015983	polr2f	100	97.638	Xiphophorus_couchianus
ENSTNIG00000010827	polr2f	100	97.638	ENSXMAG00000001559	polr2f	100	97.638	Xiphophorus_maculatus