EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000010907 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 21508 bases
Position: chrUn_random:3120980-3142487
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013837	RRM_5	PF13893.6	7.3e-08	1	2
ENSTNIP00000013837	RRM_5	PF13893.6	7.3e-08	2	2
ENSTNIP00000013837	RRM_1	PF00076.22	3e-37	1	3
ENSTNIP00000013837	RRM_1	PF00076.22	3e-37	2	3
ENSTNIP00000013837	RRM_1	PF00076.22	3e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000014032	-	9897	-	ENSTNIP00000013837	3298 (aa)	-	H3D001

Gene Model

Click here to download ENSTNIG00000010907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010907's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000010907	-	98	65.702	ENSTNIG00000014666	si:ch1073-335m2.2	100	68.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010907	-	90	77.682	ENSG00000065526	SPEN	85	90.873	Homo_sapiens
ENSTNIG00000010907	-	100	86.795	ENSAPOG00000009853	-	97	86.682	Acanthochromis_polyacanthus
ENSTNIG00000010907	-	96	79.670	ENSAPOG00000011411	si:ch1073-335m2.2	100	79.670	Acanthochromis_polyacanthus
ENSTNIG00000010907	-	70	77.559	ENSAMEG00000011817	SPEN	93	77.312	Ailuropoda_melanoleuca
ENSTNIG00000010907	-	100	86.907	ENSAOCG00000014505	-	97	86.795	Amphiprion_ocellaris
ENSTNIG00000010907	-	86	73.973	ENSAOCG00000008077	si:ch1073-335m2.2	99	73.973	Amphiprion_ocellaris
ENSTNIG00000010907	-	97	76.042	ENSAPEG00000013515	si:ch1073-335m2.2	100	76.042	Amphiprion_percula
ENSTNIG00000010907	-	100	86.907	ENSAPEG00000010288	-	97	86.795	Amphiprion_percula
ENSTNIG00000010907	-	100	85.779	ENSATEG00000005627	-	97	86.682	Anabas_testudineus
ENSTNIG00000010907	-	99	76.845	ENSAPLG00000012618	SPEN	96	75.827	Anas_platyrhynchos
ENSTNIG00000010907	-	89	76.718	ENSANAG00000034428	SPEN	92	76.463	Aotus_nancymaae
ENSTNIG00000010907	-	100	85.892	ENSACLG00000016922	-	97	85.779	Astatotilapia_calliptera
ENSTNIG00000010907	-	99	87.151	ENSAMXG00000012485	spen	97	77.207	Astyanax_mexicanus
ENSTNIG00000010907	-	89	77.435	ENSBTAG00000018729	SPEN	83	77.189	Bos_taurus
ENSTNIG00000010907	-	88	77.682	ENSCJAG00000008527	SPEN	93	77.435	Callithrix_jacchus
ENSTNIG00000010907	-	85	77.928	ENSCAFG00000016132	-	88	77.682	Canis_familiaris
ENSTNIG00000010907	-	99	77.559	ENSCHIG00000025070	SPEN	93	77.245	Capra_hircus
ENSTNIG00000010907	-	80	76.636	ENSTSYG00000036016	SPEN	93	76.636	Carlito_syrichta
ENSTNIG00000010907	-	94	74.589	ENSCAPG00000013803	SPEN	96	74.968	Cavia_aperea
ENSTNIG00000010907	-	93	75.223	ENSCPOG00000014036	SPEN	96	74.968	Cavia_porcellus
ENSTNIG00000010907	-	90	60.173	ENSCCAG00000020258	SPEN	50	59.113	Cebus_capucinus
ENSTNIG00000010907	-	70	85.185	ENSCATG00000015079	SPEN	81	80.357	Cercocebus_atys
ENSTNIG00000010907	-	69	73.710	ENSCLAG00000002018	SPEN	97	73.464	Chinchilla_lanigera
ENSTNIG00000010907	-	90	77.682	ENSCSAG00000000841	SPEN	82	77.435	Chlorocebus_sabaeus
ENSTNIG00000010907	-	99	77.055	ENSCPBG00000010477	SPEN	96	76.074	Chrysemys_picta_bellii
ENSTNIG00000010907	-	88	72.084	ENSCANG00000034547	SPEN	51	71.836	Colobus_angolensis_palliatus
ENSTNIG00000010907	-	88	76.238	ENSCGRG00001007725	Spen	84	76.695	Cricetulus_griseus_chok1gshd
ENSTNIG00000010907	-	88	73.376	ENSCGRG00000010581	Spen	83	73.131	Cricetulus_griseus_crigri
ENSTNIG00000010907	-	100	83.559	ENSCSEG00000003915	-	97	82.883	Cynoglossus_semilaevis
ENSTNIG00000010907	-	100	85.206	ENSCVAG00000016346	-	96	85.206	Cyprinodon_variegatus
ENSTNIG00000010907	-	97	72.249	ENSCVAG00000009075	si:ch1073-335m2.2	98	79.670	Cyprinodon_variegatus
ENSTNIG00000010907	-	76	74.627	ENSDARG00000074332	si:ch1073-335m2.2	71	80.000	Danio_rerio
ENSTNIG00000010907	-	76	77.865	ENSDARG00000074245	spen	100	91.111	Danio_rerio
ENSTNIG00000010907	-	60	68.976	ENSDNOG00000041948	SPEN	87	68.769	Dasypus_novemcinctus
ENSTNIG00000010907	-	89	73.028	ENSDORG00000023909	Spen	94	72.774	Dipodomys_ordii
ENSTNIG00000010907	-	94	85.294	ENSEASG00005015911	SPEN	92	80.405	Equus_asinus_asinus
ENSTNIG00000010907	-	94	85.294	ENSECAG00000008833	SPEN	92	80.405	Equus_caballus
ENSTNIG00000010907	-	55	86.047	ENSEEUG00000010255	SPEN	54	86.047	Erinaceus_europaeus
ENSTNIG00000010907	-	89	78.351	ENSELUG00000007726	si:ch1073-335m2.2	89	79.474	Esox_lucius
ENSTNIG00000010907	-	88	75.385	ENSFDAG00000010212	SPEN	84	75.128	Fukomys_damarensis
ENSTNIG00000010907	-	99	67.213	ENSFHEG00000004544	si:ch1073-335m2.2	100	78.191	Fundulus_heteroclitus
ENSTNIG00000010907	-	99	80.145	ENSGMOG00000008397	-	95	91.713	Gadus_morhua
ENSTNIG00000010907	-	100	77.697	ENSGALG00000036932	SPEN	96	75.833	Gallus_gallus
ENSTNIG00000010907	-	100	85.550	ENSGAFG00000015819	-	96	85.436	Gambusia_affinis
ENSTNIG00000010907	-	100	90.703	ENSGACG00000005341	-	97	90.346	Gasterosteus_aculeatus
ENSTNIG00000010907	-	95	80.233	ENSGACG00000001176	si:ch1073-335m2.2	70	80.233	Gasterosteus_aculeatus
ENSTNIG00000010907	-	99	78.668	ENSGAGG00000020785	SPEN	96	77.682	Gopherus_agassizii
ENSTNIG00000010907	-	90	77.682	ENSGGOG00000012041	SPEN	82	77.435	Gorilla_gorilla
ENSTNIG00000010907	-	100	85.892	ENSHBUG00000020626	-	97	85.779	Haplochromis_burtoni
ENSTNIG00000010907	-	53	74.627	ENSHBUG00000023253	si:ch1073-335m2.2	89	83.432	Haplochromis_burtoni
ENSTNIG00000010907	-	81	76.572	ENSHGLG00000019259	SPEN	90	76.326	Heterocephalus_glaber_female
ENSTNIG00000010907	-	67	75.321	ENSHGLG00100019294	SPEN	70	75.064	Heterocephalus_glaber_male
ENSTNIG00000010907	-	93	75.862	ENSHCOG00000006004	si:ch1073-335m2.2	99	75.862	Hippocampus_comes
ENSTNIG00000010907	-	92	76.667	ENSIPUG00000018212	si:ch1073-335m2.2	99	76.667	Ictalurus_punctatus
ENSTNIG00000010907	-	99	75.713	ENSIPUG00000021668	spen	96	76.055	Ictalurus_punctatus
ENSTNIG00000010907	-	88	76.056	ENSSTOG00000021428	SPEN	83	75.800	Ictidomys_tridecemlineatus
ENSTNIG00000010907	-	90	77.312	ENSJJAG00000010882	Spen	94	77.435	Jaculus_jaculus
ENSTNIG00000010907	-	72	78.571	ENSKMAG00000021725	si:ch1073-335m2.2	100	78.571	Kryptolebias_marmoratus
ENSTNIG00000010907	-	100	85.327	ENSKMAG00000003882	-	97	85.327	Kryptolebias_marmoratus
ENSTNIG00000010907	-	85	88.141	ENSLBEG00000019129	-	96	88.141	Labrus_bergylta
ENSTNIG00000010907	-	97	87.037	ENSLACG00000003258	SPEN	100	87.037	Latimeria_chalumnae
ENSTNIG00000010907	-	99	77.065	ENSLOCG00000007896	si:ch1073-335m2.2	96	77.094	Lepisosteus_oculatus
ENSTNIG00000010907	-	90	74.595	ENSLAFG00000004524	SPEN	82	75.508	Loxodonta_africana
ENSTNIG00000010907	-	75	77.682	ENSMFAG00000041974	SPEN	82	77.435	Macaca_fascicularis
ENSTNIG00000010907	-	75	77.682	ENSMMUG00000008026	SPEN	82	77.435	Macaca_mulatta
ENSTNIG00000010907	-	75	77.682	ENSMNEG00000042402	SPEN	82	77.435	Macaca_nemestrina
ENSTNIG00000010907	-	57	75.216	ENSMLEG00000039293	SPEN	82	74.969	Mandrillus_leucophaeus
ENSTNIG00000010907	-	97	73.039	ENSMAMG00000023870	si:ch1073-335m2.2	99	79.235	Mastacembelus_armatus
ENSTNIG00000010907	-	90	88.845	ENSMZEG00005021491	-	96	88.845	Maylandia_zebra
ENSTNIG00000010907	-	80	76.572	ENSMAUG00000008318	Spen	78	76.942	Mesocricetus_auratus
ENSTNIG00000010907	-	99	77.805	ENSMICG00000030994	SPEN	93	77.559	Microcebus_murinus
ENSTNIG00000010907	-	88	76.564	ENSMOCG00000016083	Spen	82	76.650	Microtus_ochrogaster
ENSTNIG00000010907	-	97	67.660	ENSMMOG00000021742	si:ch1073-335m2.2	99	79.670	Mola_mola
ENSTNIG00000010907	-	99	75.845	ENSMODG00000003411	SPEN	96	75.000	Monodelphis_domestica
ENSTNIG00000010907	-	100	84.989	ENSMALG00000008625	-	97	85.892	Monopterus_albus
ENSTNIG00000010907	-	55	75.633	MGP_CAROLIEiJ_G0026745	Spen	94	75.392	Mus_caroli
ENSTNIG00000010907	-	55	75.904	ENSMUSG00000040761	Spen	94	74.578	Mus_musculus
ENSTNIG00000010907	-	99	75.495	MGP_PahariEiJ_G0029076	Spen	93	75.956	Mus_pahari
ENSTNIG00000010907	-	55	75.633	MGP_SPRETEiJ_G0027724	Spen	94	75.392	Mus_spretus
ENSTNIG00000010907	-	67	76.312	ENSMPUG00000016317	SPEN	92	76.043	Mustela_putorius_furo
ENSTNIG00000010907	-	91	88.172	ENSMLUG00000010144	SPEN	99	75.849	Myotis_lucifugus
ENSTNIG00000010907	-	95	77.189	ENSNGAG00000000641	Spen	96	76.377	Nannospalax_galili
ENSTNIG00000010907	-	85	86.047	ENSNBRG00000022090	-	96	86.047	Neolamprologus_brichardi
ENSTNIG00000010907	-	50	75.879	ENSNBRG00000005733	si:ch1073-335m2.2	99	76.562	Neolamprologus_brichardi
ENSTNIG00000010907	-	89	76.590	ENSNLEG00000007652	SPEN	81	76.336	Nomascus_leucogenys
ENSTNIG00000010907	-	89	84.375	ENSMEUG00000002422	SPEN	86	84.375	Notamacropus_eugenii
ENSTNIG00000010907	-	66	73.956	ENSOPRG00000015800	SPEN	79	74.079	Ochotona_princeps
ENSTNIG00000010907	-	95	71.517	ENSODEG00000016644	SPEN	96	70.284	Octodon_degus
ENSTNIG00000010907	-	100	92.133	ENSONIG00000006573	-	99	93.590	Oreochromis_niloticus
ENSTNIG00000010907	-	69	71.584	ENSOCUG00000010840	SPEN	83	71.705	Oryctolagus_cuniculus
ENSTNIG00000010907	-	88	83.937	ENSORLG00000028894	-	96	83.937	Oryzias_latipes
ENSTNIG00000010907	-	88	84.389	ENSORLG00020007735	-	96	84.389	Oryzias_latipes_hni
ENSTNIG00000010907	-	100	81.398	ENSORLG00015022085	-	96	81.849	Oryzias_latipes_hsok
ENSTNIG00000010907	-	100	82.930	ENSOMEG00000007639	-	97	82.584	Oryzias_melastigma
ENSTNIG00000010907	-	72	58.246	ENSOMEG00000004509	si:ch1073-335m2.2	100	57.951	Oryzias_melastigma
ENSTNIG00000010907	-	99	77.723	ENSOGAG00000025110	SPEN	93	77.682	Otolemur_garnettii
ENSTNIG00000010907	-	88	75.465	ENSOARG00000008477	SPEN	92	75.217	Ovis_aries
ENSTNIG00000010907	-	89	76.756	ENSPPAG00000035690	SPEN	82	76.501	Pan_paniscus
ENSTNIG00000010907	-	90	77.559	ENSPTRG00000000210	SPEN	82	77.312	Pan_troglodytes
ENSTNIG00000010907	-	74	74.846	ENSPANG00000006293	SPEN	82	74.599	Papio_anubis
ENSTNIG00000010907	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	96	79.863	Paramormyrops_kingsleyae
ENSTNIG00000010907	-	100	77.816	ENSPKIG00000002617	SPEN	97	76.126	Paramormyrops_kingsleyae
ENSTNIG00000010907	-	99	71.980	ENSPSIG00000008026	SPEN	96	71.482	Pelodiscus_sinensis
ENSTNIG00000010907	-	54	75.256	ENSPEMG00000022997	Spen	52	75.607	Peromyscus_maniculatus_bairdii
ENSTNIG00000010907	-	50	71.292	ENSPFOG00000017986	si:ch1073-335m2.2	99	79.121	Poecilia_formosa
ENSTNIG00000010907	-	100	85.206	ENSPMEG00000006764	-	96	85.206	Poecilia_mexicana
ENSTNIG00000010907	-	50	71.292	ENSPMEG00000002674	si:ch1073-335m2.2	99	79.121	Poecilia_mexicana
ENSTNIG00000010907	-	100	85.321	ENSPREG00000010399	-	96	85.321	Poecilia_reticulata
ENSTNIG00000010907	-	97	71.292	ENSPREG00000005357	si:ch1073-335m2.2	99	79.121	Poecilia_reticulata
ENSTNIG00000010907	-	90	77.682	ENSPPYG00000001834	SPEN	82	77.435	Pongo_abelii
ENSTNIG00000010907	-	76	72.714	ENSPCAG00000009543	SPEN	70	81.421	Procavia_capensis
ENSTNIG00000010907	-	99	74.723	ENSPCOG00000021735	SPEN	92	74.476	Propithecus_coquereli
ENSTNIG00000010907	-	70	77.682	ENSPVAG00000013794	SPEN	68	77.435	Pteropus_vampyrus
ENSTNIG00000010907	-	50	75.879	ENSPNYG00000009042	si:ch1073-335m2.2	99	76.562	Pundamilia_nyererei
ENSTNIG00000010907	-	100	85.892	ENSPNYG00000012379	-	97	85.779	Pundamilia_nyererei
ENSTNIG00000010907	-	99	88.136	ENSPNAG00000020795	spen	97	78.935	Pygocentrus_nattereri
ENSTNIG00000010907	-	68	75.304	ENSRNOG00000033556	Spen	93	76.020	Rattus_norvegicus
ENSTNIG00000010907	-	89	76.884	ENSRBIG00000039654	SPEN	82	76.628	Rhinopithecus_bieti
ENSTNIG00000010907	-	89	76.845	ENSRROG00000035686	SPEN	81	76.590	Rhinopithecus_roxellana
ENSTNIG00000010907	-	89	77.099	ENSSBOG00000028770	SPEN	80	76.845	Saimiri_boliviensis_boliviensis
ENSTNIG00000010907	-	55	75.949	ENSSHAG00000004960	SPEN	99	75.947	Sarcophilus_harrisii
ENSTNIG00000010907	-	100	78.207	ENSSFOG00015010267	si:ch1073-335m2.2	97	77.980	Scleropages_formosus
ENSTNIG00000010907	-	88	83.019	ENSSFOG00015007131	si:ch1073-335m2.2	96	81.963	Scleropages_formosus
ENSTNIG00000010907	-	100	85.569	ENSSMAG00000008996	-	97	86.133	Scophthalmus_maximus
ENSTNIG00000010907	-	57	73.892	ENSSMAG00000000125	si:ch1073-335m2.2	100	79.121	Scophthalmus_maximus
ENSTNIG00000010907	-	100	87.359	ENSSDUG00000003476	-	97	87.246	Seriola_dumerili
ENSTNIG00000010907	-	100	68.097	ENSSDUG00000008416	si:ch1073-335m2.2	99	79.670	Seriola_dumerili
ENSTNIG00000010907	-	100	87.359	ENSSLDG00000012950	-	97	87.246	Seriola_lalandi_dorsalis
ENSTNIG00000010907	-	100	41.973	ENSSLDG00000023347	si:ch1073-335m2.2	99	79.670	Seriola_lalandi_dorsalis
ENSTNIG00000010907	-	87	71.182	ENSSPUG00000001866	-	95	71.182	Sphenodon_punctatus
ENSTNIG00000010907	-	100	87.729	ENSSPAG00000006014	-	96	87.615	Stegastes_partitus
ENSTNIG00000010907	-	97	80.220	ENSSPAG00000012454	si:ch1073-335m2.2	100	80.220	Stegastes_partitus
ENSTNIG00000010907	-	84	77.805	ENSSSCG00000034484	SPEN	85	77.559	Sus_scrofa
ENSTNIG00000010907	-	84	75.500	ENSTRUG00000021008	si:ch1073-335m2.2	99	79.670	Takifugu_rubripes
ENSTNIG00000010907	-	100	89.718	ENSTRUG00000024350	-	97	89.605	Takifugu_rubripes
ENSTNIG00000010907	-	71	75.773	ENSTBEG00000003628	SPEN	65	81.522	Tupaia_belangeri
ENSTNIG00000010907	-	70	76.756	ENSTTRG00000015704	SPEN	64	81.967	Tursiops_truncatus
ENSTNIG00000010907	-	70	77.805	ENSUAMG00000009600	SPEN	93	77.559	Ursus_americanus
ENSTNIG00000010907	-	69	74.810	ENSUMAG00000021641	SPEN	92	74.557	Ursus_maritimus
ENSTNIG00000010907	-	91	100.000	ENSVVUG00000028951	SPEN	91	100.000	Vulpes_vulpes
ENSTNIG00000010907	-	77	63.406	ENSXETG00000023114	SPEN	97	63.043	Xenopus_tropicalis
ENSTNIG00000010907	-	97	71.292	ENSXCOG00000004516	si:ch1073-335m2.2	99	79.121	Xiphophorus_couchianus
ENSTNIG00000010907	-	100	85.092	ENSXMAG00000021384	-	96	85.092	Xiphophorus_maculatus
ENSTNIG00000010907	-	97	71.292	ENSXMAG00000029887	si:ch1073-335m2.2	99	79.121	Xiphophorus_maculatus