EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000010923 (Gene tree)
Gene ID: -
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2771 bases
Position: chrUn_random:3548558-3551328
Accession: ZDB-GENE-060503-289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000013853	B3_4	PF03483.17	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000014048	-	1668	-	ENSTNIP00000013853	555 (aa)	-	H3D017

Gene Model

Click here to download ENSTNIG00000010923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000010923's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000010923	lrrc47	99	51.993	ENSG00000130764	LRRC47	99	52.768	Homo_sapiens
ENSTNIG00000010923	lrrc47	99	77.102	ENSAPOG00000019553	lrrc47	100	76.029	Acanthochromis_polyacanthus
ENSTNIG00000010923	lrrc47	75	56.481	ENSAMEG00000009152	LRRC47	94	56.481	Ailuropoda_melanoleuca
ENSTNIG00000010923	lrrc47	67	61.053	ENSAPLG00000003167	LRRC47	99	61.155	Anas_platyrhynchos
ENSTNIG00000010923	lrrc47	66	59.947	ENSACAG00000008267	LRRC47	99	59.947	Anolis_carolinensis
ENSTNIG00000010923	lrrc47	99	52.257	ENSANAG00000025576	LRRC47	99	52.257	Aotus_nancymaae
ENSTNIG00000010923	lrrc47	99	52.513	ENSBTAG00000004738	LRRC47	99	52.340	Bos_taurus
ENSTNIG00000010923	lrrc47	94	53.297	ENSCAFG00000019492	LRRC47	97	52.613	Canis_familiaris
ENSTNIG00000010923	lrrc47	98	52.797	ENSCAFG00020009667	LRRC47	99	52.972	Canis_lupus_dingo
ENSTNIG00000010923	lrrc47	99	52.513	ENSCHIG00000022607	LRRC47	98	52.962	Capra_hircus
ENSTNIG00000010923	lrrc47	94	53.016	ENSTSYG00000009326	LRRC47	97	53.357	Carlito_syrichta
ENSTNIG00000010923	lrrc47	65	58.556	ENSCAPG00000016517	LRRC47	99	58.400	Cavia_aperea
ENSTNIG00000010923	lrrc47	99	51.742	ENSCPOG00000014931	LRRC47	95	51.742	Cavia_porcellus
ENSTNIG00000010923	lrrc47	99	51.215	ENSCCAG00000024895	LRRC47	99	51.993	Cebus_capucinus
ENSTNIG00000010923	lrrc47	99	52.513	ENSCATG00000029337	LRRC47	99	53.287	Cercocebus_atys
ENSTNIG00000010923	lrrc47	99	51.664	ENSCLAG00000006093	LRRC47	99	52.014	Chinchilla_lanigera
ENSTNIG00000010923	lrrc47	99	52.686	ENSCSAG00000000727	LRRC47	99	53.460	Chlorocebus_sabaeus
ENSTNIG00000010923	lrrc47	99	49.327	ENSCPBG00000019404	LRRC47	99	49.748	Chrysemys_picta_bellii
ENSTNIG00000010923	lrrc47	79	55.022	ENSCANG00000030701	LRRC47	96	55.991	Colobus_angolensis_palliatus
ENSTNIG00000010923	lrrc47	99	52.189	ENSCGRG00001015159	Lrrc47	89	52.348	Cricetulus_griseus_chok1gshd
ENSTNIG00000010923	lrrc47	66	57.979	ENSCGRG00000017336	Lrrc47	99	58.511	Cricetulus_griseus_crigri
ENSTNIG00000010923	lrrc47	99	70.662	ENSCSEG00000006217	lrrc47	96	70.536	Cynoglossus_semilaevis
ENSTNIG00000010923	lrrc47	65	58.511	ENSDORG00000016594	Lrrc47	99	58.777	Dipodomys_ordii
ENSTNIG00000010923	lrrc47	99	53.125	ENSEASG00005021788	LRRC47	99	53.125	Equus_asinus_asinus
ENSTNIG00000010923	lrrc47	99	53.299	ENSECAG00000022472	LRRC47	89	53.299	Equus_caballus
ENSTNIG00000010923	lrrc47	99	66.021	ENSELUG00000017544	lrrc47	98	67.430	Esox_lucius
ENSTNIG00000010923	lrrc47	91	51.136	ENSFCAG00000011632	LRRC47	89	52.362	Felis_catus
ENSTNIG00000010923	lrrc47	70	60.411	ENSFALG00000009631	LRRC47	98	56.751	Ficedula_albicollis
ENSTNIG00000010923	lrrc47	99	64.413	ENSGMOG00000015674	lrrc47	100	64.947	Gadus_morhua
ENSTNIG00000010923	lrrc47	98	50.265	ENSGALG00000050995	LRRC47	99	50.442	Gallus_gallus
ENSTNIG00000010923	lrrc47	99	75.000	ENSGACG00000005550	lrrc47	99	75.000	Gasterosteus_aculeatus
ENSTNIG00000010923	lrrc47	99	49.161	ENSGAGG00000022584	LRRC47	99	49.916	Gopherus_agassizii
ENSTNIG00000010923	lrrc47	99	52.340	ENSGGOG00000015571	LRRC47	99	53.114	Gorilla_gorilla
ENSTNIG00000010923	lrrc47	99	50.697	ENSHGLG00000018278	LRRC47	95	50.697	Heterocephalus_glaber_female
ENSTNIG00000010923	lrrc47	70	56.608	ENSHGLG00100008507	LRRC47	99	56.608	Heterocephalus_glaber_male
ENSTNIG00000010923	lrrc47	99	75.000	ENSHCOG00000006348	lrrc47	98	75.000	Hippocampus_comes
ENSTNIG00000010923	lrrc47	99	52.797	ENSSTOG00000027559	LRRC47	99	52.422	Ictidomys_tridecemlineatus
ENSTNIG00000010923	lrrc47	99	54.514	ENSJJAG00000017474	Lrrc47	96	53.739	Jaculus_jaculus
ENSTNIG00000010923	lrrc47	99	74.597	ENSKMAG00000003414	lrrc47	100	75.313	Kryptolebias_marmoratus
ENSTNIG00000010923	lrrc47	99	52.604	ENSLAFG00000011657	LRRC47	99	52.951	Loxodonta_africana
ENSTNIG00000010923	lrrc47	99	39.755	ENSMFAG00000045730	LRRC47	92	53.876	Macaca_fascicularis
ENSTNIG00000010923	lrrc47	99	53.472	ENSMNEG00000042488	LRRC47	99	53.726	Macaca_nemestrina
ENSTNIG00000010923	lrrc47	77	54.810	ENSMLEG00000043735	LRRC47	90	55.804	Mandrillus_leucophaeus
ENSTNIG00000010923	lrrc47	99	52.539	ENSMAUG00000021337	Lrrc47	98	52.787	Mesocricetus_auratus
ENSTNIG00000010923	lrrc47	99	53.391	ENSMICG00000026816	LRRC47	99	53.913	Microcebus_murinus
ENSTNIG00000010923	lrrc47	99	52.827	ENSMOCG00000021279	Lrrc47	99	53.076	Microtus_ochrogaster
ENSTNIG00000010923	lrrc47	99	79.606	ENSMMOG00000017007	lrrc47	100	79.428	Mola_mola
ENSTNIG00000010923	lrrc47	99	43.805	ENSMODG00000006554	LRRC47	98	51.309	Monodelphis_domestica
ENSTNIG00000010923	lrrc47	99	52.622	MGP_CAROLIEiJ_G0026864	Lrrc47	99	52.431	Mus_caroli
ENSTNIG00000010923	lrrc47	99	52.972	ENSMUSG00000029028	Lrrc47	99	52.778	Mus_musculus
ENSTNIG00000010923	lrrc47	99	52.273	MGP_PahariEiJ_G0029212	Lrrc47	99	52.083	Mus_pahari
ENSTNIG00000010923	lrrc47	99	52.797	MGP_SPRETEiJ_G0027857	Lrrc47	99	52.604	Mus_spretus
ENSTNIG00000010923	lrrc47	66	60.743	ENSMPUG00000007321	LRRC47	75	61.008	Mustela_putorius_furo
ENSTNIG00000010923	lrrc47	98	51.675	ENSNGAG00000022153	Lrrc47	98	51.404	Nannospalax_galili
ENSTNIG00000010923	lrrc47	99	51.304	ENSNLEG00000008131	LRRC47	99	52.083	Nomascus_leucogenys
ENSTNIG00000010923	lrrc47	84	53.704	ENSODEG00000010882	LRRC47	93	53.704	Octodon_degus
ENSTNIG00000010923	lrrc47	96	74.815	ENSORLG00000002532	lrrc47	100	73.889	Oryzias_latipes
ENSTNIG00000010923	lrrc47	99	74.597	ENSORLG00020019601	lrrc47	100	73.703	Oryzias_latipes_hni
ENSTNIG00000010923	lrrc47	99	74.419	ENSORLG00015014040	lrrc47	100	73.524	Oryzias_latipes_hsok
ENSTNIG00000010923	lrrc47	99	73.084	ENSOMEG00000008989	lrrc47	100	73.882	Oryzias_melastigma
ENSTNIG00000010923	lrrc47	99	53.217	ENSOGAG00000001553	LRRC47	99	53.217	Otolemur_garnettii
ENSTNIG00000010923	lrrc47	99	50.260	ENSOARG00000015290	LRRC47	99	50.430	Ovis_aries
ENSTNIG00000010923	lrrc47	74	56.674	ENSPPAG00000036370	-	98	57.710	Pan_paniscus
ENSTNIG00000010923	lrrc47	99	51.394	ENSPPRG00000005261	LRRC47	98	51.568	Panthera_pardus
ENSTNIG00000010923	lrrc47	99	52.166	ENSPTRG00000000068	LRRC47	99	52.941	Pan_troglodytes
ENSTNIG00000010923	lrrc47	99	52.686	ENSPANG00000012437	LRRC47	99	53.460	Papio_anubis
ENSTNIG00000010923	lrrc47	66	60.212	ENSPSIG00000004196	LRRC47	99	61.376	Pelodiscus_sinensis
ENSTNIG00000010923	lrrc47	65	58.602	ENSPEMG00000021068	Lrrc47	99	58.445	Peromyscus_maniculatus_bairdii
ENSTNIG00000010923	lrrc47	98	53.251	ENSPCIG00000003638	LRRC47	98	53.310	Phascolarctos_cinereus
ENSTNIG00000010923	lrrc47	94	76.673	ENSPFOG00000000992	lrrc47	94	76.673	Poecilia_formosa
ENSTNIG00000010923	lrrc47	99	76.715	ENSPLAG00000008077	lrrc47	100	76.715	Poecilia_latipinna
ENSTNIG00000010923	lrrc47	99	75.719	ENSPMEG00000007367	lrrc47	100	75.719	Poecilia_mexicana
ENSTNIG00000010923	lrrc47	99	52.166	ENSPPYG00000001960	LRRC47	99	52.941	Pongo_abelii
ENSTNIG00000010923	lrrc47	99	52.870	ENSPCOG00000019161	LRRC47	99	53.125	Propithecus_coquereli
ENSTNIG00000010923	lrrc47	99	51.489	ENSPVAG00000009839	LRRC47	99	51.923	Pteropus_vampyrus
ENSTNIG00000010923	lrrc47	98	62.635	ENSPNAG00000017982	lrrc47	98	62.816	Pygocentrus_nattereri
ENSTNIG00000010923	lrrc47	99	51.736	ENSRNOG00000024796	Lrrc47	99	51.986	Rattus_norvegicus
ENSTNIG00000010923	lrrc47	99	52.686	ENSRBIG00000019437	LRRC47	99	53.460	Rhinopithecus_bieti
ENSTNIG00000010923	lrrc47	99	52.686	ENSRROG00000043182	LRRC47	99	53.460	Rhinopithecus_roxellana
ENSTNIG00000010923	lrrc47	79	55.531	ENSSBOG00000026334	LRRC47	92	55.531	Saimiri_boliviensis_boliviensis
ENSTNIG00000010923	lrrc47	98	48.342	ENSSHAG00000007360	LRRC47	99	48.616	Sarcophilus_harrisii
ENSTNIG00000010923	lrrc47	99	76.250	ENSSMAG00000009344	lrrc47	100	76.250	Scophthalmus_maximus
ENSTNIG00000010923	lrrc47	99	77.996	ENSSDUG00000014618	lrrc47	100	77.996	Seriola_dumerili
ENSTNIG00000010923	lrrc47	99	77.996	ENSSLDG00000018908	lrrc47	100	77.996	Seriola_lalandi_dorsalis
ENSTNIG00000010923	lrrc47	99	49.571	ENSSPUG00000010277	LRRC47	98	51.027	Sphenodon_punctatus
ENSTNIG00000010923	lrrc47	99	78.712	ENSSPAG00000005188	lrrc47	100	77.639	Stegastes_partitus
ENSTNIG00000010923	lrrc47	99	52.696	ENSSSCG00000039516	LRRC47	98	52.870	Sus_scrofa
ENSTNIG00000010923	lrrc47	70	59.241	ENSTGUG00000002737	LRRC47	98	59.591	Taeniopygia_guttata
ENSTNIG00000010923	lrrc47	99	89.531	ENSTRUG00000017696	lrrc47	100	88.809	Takifugu_rubripes
ENSTNIG00000010923	lrrc47	99	51.910	ENSTTRG00000011751	LRRC47	99	52.083	Tursiops_truncatus
ENSTNIG00000010923	lrrc47	89	54.023	ENSUAMG00000012080	LRRC47	98	54.023	Ursus_americanus
ENSTNIG00000010923	lrrc47	66	59.318	ENSUMAG00000010781	LRRC47	80	59.580	Ursus_maritimus
ENSTNIG00000010923	lrrc47	94	51.188	ENSVVUG00000027118	LRRC47	93	51.371	Vulpes_vulpes
ENSTNIG00000010923	lrrc47	98	55.971	ENSXETG00000006029	lrrc47	98	55.971	Xenopus_tropicalis
ENSTNIG00000010923	lrrc47	99	75.407	ENSXCOG00000002813	lrrc47	99	75.226	Xiphophorus_couchianus
ENSTNIG00000010923	lrrc47	99	75.636	ENSXMAG00000019386	lrrc47	99	75.636	Xiphophorus_maculatus