EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
ENSTNIG00000011076 (Gene tree)
Gene ID
-
Gene Symbol
upf1
Alias
rent1|wu:fi40f07|wu:fj48a01|zgc:55472
Full Name
UPF1%2C RNA helicase and ATPase
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Plus strand
Length
6934 bases
Position
chr15:4132440-4139373
Accession
ZDB-GENE-040426-2836
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000003057UPF1_Zn_bindPF09416.101.9e-7511
ENSTNIP00000014011UPF1_Zn_bindPF09416.102e-7511
ENSTNIP00000003057ResIIIPF04851.151.5e-0511
ENSTNIP00000014011ResIIIPF04851.151.5e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000014207-3381-ENSTNIP000000140111126 (aa)-H3D0H5
ENSTNIT00000001375-3306-ENSTNIP000000030571101 (aa)-H3C488
Gene Model
Click here to download ENSTNIG00000011076's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000011076's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000011076upf110090.331ENSTNIG00000010189-10090.331

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