EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSTNIG00000011149 (Gene tree)
Gene ID: -
Gene Symbol: dnase1 (1 of many)
Alias: zgc:92440
Full Name: deoxyribonuclease I
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3488 bases
Position: chrUn_random:4378847-4382334
Accession: ZDB-GENE-040718-423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000014084	Exo_endo_phos	PF03372.23	2.9e-11	1	1
ENSTNIP00000002843	Exo_endo_phos	PF03372.23	4e-11	1	1
ENSTNIP00000000170	Exo_endo_phos	PF03372.23	4.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003127	-	834	-	ENSTNIP00000002843	278 (aa)	-	H3C3M4
ENSTNIT00000001709	-	843	-	ENSTNIP00000000170	281 (aa)	-	H3BW08
ENSTNIT00000014280	-	1012	-	ENSTNIP00000014084	279 (aa)	-	H3D0P8

Gene Model

Click here to download ENSTNIG00000011149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000011149's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000011149	dnase1	91	44.615	ENSTNIG00000004950	-	79	44.961
ENSTNIG00000011149	dnase1	99	43.662	ENSTNIG00000015148	dnase1l1l	96	43.262
ENSTNIG00000011149	dnase1	96	41.091	ENSTNIG00000006563	dnase1l4.1	91	42.085
ENSTNIG00000011149	dnase1	100	84.229	ENSTNIG00000001457	dnase1	99	84.892