EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000011188 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1562 bases
Position: chrUn_random:92232821-92234382
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000014123	zf-C2H2	PF00096.26	1.2e-52	1	9
ENSTNIP00000014123	zf-C2H2	PF00096.26	1.2e-52	2	9
ENSTNIP00000014123	zf-C2H2	PF00096.26	1.2e-52	3	9
ENSTNIP00000014123	zf-C2H2	PF00096.26	1.2e-52	4	9
ENSTNIP00000014123	zf-C2H2	PF00096.26	1.2e-52	5	9
ENSTNIP00000014123	zf-C2H2	PF00096.26	1.2e-52	6	9
ENSTNIP00000014123	zf-C2H2	PF00096.26	1.2e-52	7	9
ENSTNIP00000014123	zf-C2H2	PF00096.26	1.2e-52	8	9
ENSTNIP00000014123	zf-C2H2	PF00096.26	1.2e-52	9	9
ENSTNIP00000014123	zf-met	PF12874.7	7.3e-14	1	3
ENSTNIP00000014123	zf-met	PF12874.7	7.3e-14	2	3
ENSTNIP00000014123	zf-met	PF12874.7	7.3e-14	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000014319	-	1383	-	ENSTNIP00000014123	461 (aa)	-	H3D0T7

Gene Model

Click here to download ENSTNIG00000011188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000011188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000011188	-	100	36.607	ENSTNIG00000005901	prdm5	80	37.387
ENSTNIG00000011188	-	98	36.306	ENSTNIG00000010902	zbtb17	57	34.294
ENSTNIG00000011188	-	98	34.409	ENSTNIG00000019069	-	100	34.409
ENSTNIG00000011188	-	65	47.059	ENSTNIG00000013008	-	99	47.059
ENSTNIG00000011188	-	98	36.624	ENSTNIG00000003979	-	99	36.624
ENSTNIG00000011188	-	98	39.450	ENSTNIG00000001921	-	58	39.450
ENSTNIG00000011188	-	91	38.298	ENSTNIG00000012473	scrt2	53	37.879
ENSTNIG00000011188	-	98	31.551	ENSTNIG00000000073	znf646	98	31.551
ENSTNIG00000011188	-	98	41.333	ENSTNIG00000000320	-	100	41.333
ENSTNIG00000011188	-	98	38.788	ENSTNIG00000017000	-	100	38.788
ENSTNIG00000011188	-	96	41.176	ENSTNIG00000003865	-	89	41.176
ENSTNIG00000011188	-	97	41.818	ENSTNIG00000005856	-	100	41.818
ENSTNIG00000011188	-	97	38.342	ENSTNIG00000000934	-	97	42.446
ENSTNIG00000011188	-	97	35.200	ENSTNIG00000009831	-	98	33.766
ENSTNIG00000011188	-	98	37.941	ENSTNIG00000008242	-	100	37.941
ENSTNIG00000011188	-	98	32.143	ENSTNIG00000007805	zbtb41	50	32.143
ENSTNIG00000011188	-	97	32.414	ENSTNIG00000011746	hinfp	62	32.414
ENSTNIG00000011188	-	98	36.937	ENSTNIG00000008154	-	100	36.937
ENSTNIG00000011188	-	98	31.833	ENSTNIG00000014443	prdm9	78	31.613
ENSTNIG00000011188	-	98	39.222	ENSTNIG00000001164	ZNF628	99	39.222
ENSTNIG00000011188	-	97	35.714	ENSTNIG00000008504	snai2	55	35.714
ENSTNIG00000011188	-	99	36.777	ENSTNIG00000010722	GZF1	54	36.777
ENSTNIG00000011188	-	98	34.538	ENSTNIG00000005798	zbtb16a	53	34.538
ENSTNIG00000011188	-	98	41.562	ENSTNIG00000018984	-	99	41.562
ENSTNIG00000011188	-	98	42.938	ENSTNIG00000000277	-	97	42.938
ENSTNIG00000011188	-	98	34.868	ENSTNIG00000012449	zbtb48	50	34.868
ENSTNIG00000011188	-	97	42.066	ENSTNIG00000000330	-	100	42.066
ENSTNIG00000011188	-	99	36.616	ENSTNIG00000008100	-	100	36.616
ENSTNIG00000011188	-	97	43.421	ENSTNIG00000018001	e4f1	60	41.111
ENSTNIG00000011188	-	99	32.524	ENSTNIG00000001159	si:dkey-89b17.4	99	32.524
ENSTNIG00000011188	-	77	43.038	ENSTNIG00000003479	-	100	43.038
ENSTNIG00000011188	-	98	37.202	ENSTNIG00000002343	-	87	37.202
ENSTNIG00000011188	-	98	37.743	ENSTNIG00000002344	-	100	37.743
ENSTNIG00000011188	-	99	38.487	ENSTNIG00000005023	-	100	38.487
ENSTNIG00000011188	-	98	41.718	ENSTNIG00000003834	gfi1b	52	41.718
ENSTNIG00000011188	-	97	38.007	ENSTNIG00000011367	znf710b	51	38.007
ENSTNIG00000011188	-	83	37.762	ENSTNIG00000018384	scrt1b	64	37.762
ENSTNIG00000011188	-	98	37.419	ENSTNIG00000005479	-	99	37.419
ENSTNIG00000011188	-	98	37.456	ENSTNIG00000008200	-	100	37.456
ENSTNIG00000011188	-	99	33.910	ENSTNIG00000003880	znf319b	95	33.910
ENSTNIG00000011188	-	98	35.030	ENSTNIG00000000528	-	96	35.030
ENSTNIG00000011188	-	96	35.789	ENSTNIG00000008194	prdm14	87	35.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000011188	-	98	79.830	ENSAPOG00000001563	-	84	76.222	Acanthochromis_polyacanthus
ENSTNIG00000011188	-	99	54.608	ENSACIG00000015411	-	84	67.770	Amphilophus_citrinellus
ENSTNIG00000011188	-	98	73.077	ENSAOCG00000013589	-	92	73.077	Amphiprion_ocellaris
ENSTNIG00000011188	-	98	71.364	ENSAPEG00000022774	-	95	71.364	Amphiprion_percula
ENSTNIG00000011188	-	98	75.449	ENSATEG00000019261	-	86	75.449	Anabas_testudineus
ENSTNIG00000011188	-	98	86.411	ENSACLG00000008606	-	89	86.411	Astatotilapia_calliptera
ENSTNIG00000011188	-	99	78.698	ENSACLG00000008624	-	75	78.698	Astatotilapia_calliptera
ENSTNIG00000011188	-	99	74.792	ENSCSEG00000008903	-	83	73.638	Cynoglossus_semilaevis
ENSTNIG00000011188	-	98	85.654	ENSCVAG00000016534	-	52	85.654	Cyprinodon_variegatus
ENSTNIG00000011188	-	98	64.023	ENSGMOG00000000494	-	100	63.056	Gadus_morhua
ENSTNIG00000011188	-	98	76.596	ENSGAFG00000002659	-	64	76.596	Gambusia_affinis
ENSTNIG00000011188	-	100	78.079	ENSGACG00000001377	-	93	78.891	Gasterosteus_aculeatus
ENSTNIG00000011188	-	99	76.018	ENSHBUG00000008502	-	84	76.018	Haplochromis_burtoni
ENSTNIG00000011188	-	98	76.520	ENSHCOG00000000511	-	84	64.516	Hippocampus_comes
ENSTNIG00000011188	-	98	76.522	ENSLBEG00000018509	-	92	76.522	Labrus_bergylta
ENSTNIG00000011188	-	100	79.792	ENSMAMG00000018137	-	63	79.792	Mastacembelus_armatus
ENSTNIG00000011188	-	99	76.018	ENSMZEG00005002583	-	83	76.018	Maylandia_zebra
ENSTNIG00000011188	-	98	65.753	ENSMMOG00000009733	-	92	75.342	Mola_mola
ENSTNIG00000011188	-	97	60.181	ENSMALG00000019991	-	96	51.877	Monopterus_albus
ENSTNIG00000011188	-	98	87.018	ENSNBRG00000008223	-	81	87.018	Neolamprologus_brichardi
ENSTNIG00000011188	-	99	80.380	ENSONIG00000017233	-	99	80.380	Oreochromis_niloticus
ENSTNIG00000011188	-	98	74.262	ENSOMEG00000016463	-	59	74.262	Oryzias_melastigma
ENSTNIG00000011188	-	98	49.512	ENSPMGG00000002384	-	87	49.512	Periophthalmus_magnuspinnatus
ENSTNIG00000011188	-	98	77.234	ENSPFOG00000006287	-	76	77.234	Poecilia_formosa
ENSTNIG00000011188	-	98	77.234	ENSPMEG00000005897	-	70	77.234	Poecilia_mexicana
ENSTNIG00000011188	-	98	76.652	ENSPREG00000021246	-	96	76.652	Poecilia_reticulata
ENSTNIG00000011188	-	99	85.232	ENSPNYG00000023088	-	84	76.018	Pundamilia_nyererei
ENSTNIG00000011188	-	98	81.316	ENSSDUG00000004892	-	97	58.286	Seriola_dumerili
ENSTNIG00000011188	-	98	77.704	ENSSLDG00000005670	-	91	77.704	Seriola_lalandi_dorsalis
ENSTNIG00000011188	-	98	70.157	ENSSPAG00000022219	-	66	70.157	Stegastes_partitus
ENSTNIG00000011188	-	98	76.383	ENSXMAG00000000866	-	61	76.383	Xiphophorus_maculatus