EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000011278 (Gene tree)
Gene ID: -
Gene Symbol: rbfox3b
Alias: rbfox3l|si:ch73-322f21.1
Full Name: RNA binding fox-1 homolog 3b
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 29804 bases
Position: chr3:14706845-14736648
Accession: ZDB-GENE-091204-46
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000014217	Fox-1_C	PF12414.8	7.1e-43	1	1
ENSTNIP00000014217	RRM_1	PF00076.22	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000014415	-	1203	-	ENSTNIP00000014217	400 (aa)	-	H3D131

Gene Model

Click here to download ENSTNIG00000011278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000011278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000011278	rbfox3b	73	60.265	ENSTNIG00000008088	rbfox1l	99	60.265
ENSTNIG00000011278	rbfox3b	68	48.276	ENSTNIG00000002567	rbfox1	99	50.943

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000011278	rbfox3b	83	71.471	ENSG00000167281	RBFOX3	100	73.775	Homo_sapiens
ENSTNIG00000011278	rbfox3b	90	61.602	ENSAPOG00000015658	-	85	62.431	Acanthochromis_polyacanthus
ENSTNIG00000011278	rbfox3b	100	83.000	ENSAPOG00000021630	rbfox3b	90	88.333	Acanthochromis_polyacanthus
ENSTNIG00000011278	rbfox3b	99	71.144	ENSAMEG00000014170	RBFOX3	98	72.388	Ailuropoda_melanoleuca
ENSTNIG00000011278	rbfox3b	85	67.246	ENSACIG00000003768	-	90	67.536	Amphilophus_citrinellus
ENSTNIG00000011278	rbfox3b	87	83.862	ENSACIG00000010817	rbfox3b	100	83.862	Amphilophus_citrinellus
ENSTNIG00000011278	rbfox3b	90	88.333	ENSAOCG00000012358	rbfox3b	90	88.333	Amphiprion_ocellaris
ENSTNIG00000011278	rbfox3b	97	67.866	ENSAOCG00000010786	-	88	70.604	Amphiprion_ocellaris
ENSTNIG00000011278	rbfox3b	98	67.172	ENSAPEG00000015891	-	93	67.929	Amphiprion_percula
ENSTNIG00000011278	rbfox3b	90	79.387	ENSAPEG00000019081	rbfox3b	88	78.830	Amphiprion_percula
ENSTNIG00000011278	rbfox3b	84	68.935	ENSATEG00000023101	-	98	69.688	Anabas_testudineus
ENSTNIG00000011278	rbfox3b	87	79.787	ENSATEG00000019945	rbfox3b	99	79.787	Anabas_testudineus
ENSTNIG00000011278	rbfox3b	90	73.003	ENSACAG00000016093	RBFOX3	92	74.033	Anolis_carolinensis
ENSTNIG00000011278	rbfox3b	82	71.386	ENSANAG00000023457	RBFOX3	100	73.487	Aotus_nancymaae
ENSTNIG00000011278	rbfox3b	89	73.464	ENSACLG00000025552	-	89	74.302	Astatotilapia_calliptera
ENSTNIG00000011278	rbfox3b	100	82.045	ENSACLG00000020011	rbfox3b	100	87.826	Astatotilapia_calliptera
ENSTNIG00000011278	rbfox3b	90	78.393	ENSAMXG00000042841	rbfox3b	94	77.839	Astyanax_mexicanus
ENSTNIG00000011278	rbfox3b	91	74.124	ENSAMXG00000037246	rbfox3a	99	76.230	Astyanax_mexicanus
ENSTNIG00000011278	rbfox3b	71	72.474	ENSBTAG00000006280	RBFOX3	100	57.614	Bos_taurus
ENSTNIG00000011278	rbfox3b	83	66.867	ENSCJAG00000009563	RBFOX3	100	65.649	Callithrix_jacchus
ENSTNIG00000011278	rbfox3b	78	69.649	ENSCAFG00000005547	RBFOX3	99	71.795	Canis_familiaris
ENSTNIG00000011278	rbfox3b	92	58.950	ENSCAFG00020008126	RBFOX3	100	61.982	Canis_lupus_dingo
ENSTNIG00000011278	rbfox3b	92	58.950	ENSCHIG00000009124	RBFOX3	100	61.982	Capra_hircus
ENSTNIG00000011278	rbfox3b	82	62.269	ENSTSYG00000029617	RBFOX3	100	65.990	Carlito_syrichta
ENSTNIG00000011278	rbfox3b	92	59.953	ENSCPOG00000021703	RBFOX3	100	63.980	Cavia_porcellus
ENSTNIG00000011278	rbfox3b	82	71.386	ENSCCAG00000028450	RBFOX3	100	73.487	Cebus_capucinus
ENSTNIG00000011278	rbfox3b	82	71.687	ENSCATG00000018349	RBFOX3	100	73.775	Cercocebus_atys
ENSTNIG00000011278	rbfox3b	92	60.238	ENSCLAG00000006449	RBFOX3	100	64.304	Chinchilla_lanigera
ENSTNIG00000011278	rbfox3b	82	71.687	ENSCSAG00000002355	RBFOX3	100	73.775	Chlorocebus_sabaeus
ENSTNIG00000011278	rbfox3b	100	71.072	ENSCPBG00000010904	RBFOX3	100	75.362	Chrysemys_picta_bellii
ENSTNIG00000011278	rbfox3b	82	71.687	ENSCANG00000043120	RBFOX3	100	73.775	Colobus_angolensis_palliatus
ENSTNIG00000011278	rbfox3b	92	58.907	ENSCGRG00001019476	Rbfox3	100	64.394	Cricetulus_griseus_chok1gshd
ENSTNIG00000011278	rbfox3b	92	58.907	ENSCGRG00000003268	Rbfox3	100	64.394	Cricetulus_griseus_crigri
ENSTNIG00000011278	rbfox3b	99	68.844	ENSCSEG00000015567	RBFOX3	96	69.598	Cynoglossus_semilaevis
ENSTNIG00000011278	rbfox3b	93	65.684	ENSCSEG00000020606	RBFOX3	88	67.131	Cynoglossus_semilaevis
ENSTNIG00000011278	rbfox3b	89	89.296	ENSCVAG00000006882	rbfox3b	88	89.296	Cyprinodon_variegatus
ENSTNIG00000011278	rbfox3b	90	74.863	ENSDARG00000010083	rbfox3a	99	77.285	Danio_rerio
ENSTNIG00000011278	rbfox3b	100	62.843	ENSDARG00000074310	rbfox3b	97	73.301	Danio_rerio
ENSTNIG00000011278	rbfox3b	69	61.180	ENSDNOG00000039391	RBFOX3	96	54.094	Dasypus_novemcinctus
ENSTNIG00000011278	rbfox3b	92	54.808	ENSDORG00000005352	Rbfox3	100	57.801	Dipodomys_ordii
ENSTNIG00000011278	rbfox3b	99	58.213	ENSEBUG00000002129	RBFOX3	100	58.612	Eptatretus_burgeri
ENSTNIG00000011278	rbfox3b	78	50.625	ENSEBUG00000013559	RBFOX3	81	50.000	Eptatretus_burgeri
ENSTNIG00000011278	rbfox3b	82	71.856	ENSEASG00005005059	RBFOX3	100	73.639	Equus_asinus_asinus
ENSTNIG00000011278	rbfox3b	83	71.343	ENSECAG00000023811	RBFOX3	100	73.352	Equus_caballus
ENSTNIG00000011278	rbfox3b	76	75.385	ENSEEUG00000013974	RBFOX3	76	75.238	Erinaceus_europaeus
ENSTNIG00000011278	rbfox3b	100	78.750	ENSELUG00000017963	rbfox3b	100	75.291	Esox_lucius
ENSTNIG00000011278	rbfox3b	52	60.377	ENSELUG00000009807	-	63	56.621	Esox_lucius
ENSTNIG00000011278	rbfox3b	90	71.625	ENSFCAG00000002555	RBFOX3	100	73.199	Felis_catus
ENSTNIG00000011278	rbfox3b	99	63.725	ENSFALG00000012288	RBFOX3	98	64.951	Ficedula_albicollis
ENSTNIG00000011278	rbfox3b	92	55.924	ENSFDAG00000007489	RBFOX3	100	59.698	Fukomys_damarensis
ENSTNIG00000011278	rbfox3b	86	79.651	ENSFHEG00000008550	rbfox3b	100	79.651	Fundulus_heteroclitus
ENSTNIG00000011278	rbfox3b	96	58.796	ENSGMOG00000019304	-	100	59.491	Gadus_morhua
ENSTNIG00000011278	rbfox3b	90	74.033	ENSGALG00000032889	RBFOX3	92	75.138	Gallus_gallus
ENSTNIG00000011278	rbfox3b	84	86.607	ENSGAFG00000005025	rbfox3b	88	86.607	Gambusia_affinis
ENSTNIG00000011278	rbfox3b	92	59.382	ENSGACG00000002138	-	100	61.468	Gasterosteus_aculeatus
ENSTNIG00000011278	rbfox3b	100	71.072	ENSGAGG00000020025	RBFOX3	100	75.362	Gopherus_agassizii
ENSTNIG00000011278	rbfox3b	82	71.687	ENSGGOG00000012546	RBFOX3	100	73.775	Gorilla_gorilla
ENSTNIG00000011278	rbfox3b	100	82.250	ENSHBUG00000018099	rbfox3b	88	88.451	Haplochromis_burtoni
ENSTNIG00000011278	rbfox3b	99	69.095	ENSHBUG00000023098	-	98	69.849	Haplochromis_burtoni
ENSTNIG00000011278	rbfox3b	92	59.670	ENSHGLG00000008679	RBFOX3	100	63.409	Heterocephalus_glaber_female
ENSTNIG00000011278	rbfox3b	92	57.447	ENSHGLG00100014739	RBFOX3	100	58.447	Heterocephalus_glaber_male
ENSTNIG00000011278	rbfox3b	84	74.556	ENSHCOG00000007444	RBFOX3	85	72.404	Hippocampus_comes
ENSTNIG00000011278	rbfox3b	88	64.489	ENSHCOG00000001863	RBFOX3	95	65.254	Hippocampus_comes
ENSTNIG00000011278	rbfox3b	100	69.458	ENSIPUG00000012010	rbfox3a	99	74.863	Ictalurus_punctatus
ENSTNIG00000011278	rbfox3b	87	67.196	ENSIPUG00000021966	rbfox3b	98	76.351	Ictalurus_punctatus
ENSTNIG00000011278	rbfox3b	92	56.032	ENSSTOG00000026817	RBFOX3	100	59.885	Ictidomys_tridecemlineatus
ENSTNIG00000011278	rbfox3b	92	58.473	ENSJJAG00000014167	Rbfox3	100	64.721	Jaculus_jaculus
ENSTNIG00000011278	rbfox3b	100	79.500	ENSKMAG00000006726	rbfox3b	90	88.333	Kryptolebias_marmoratus
ENSTNIG00000011278	rbfox3b	90	76.243	ENSLBEG00000022508	-	92	76.176	Labrus_bergylta
ENSTNIG00000011278	rbfox3b	100	82.500	ENSLBEG00000004030	rbfox3b	99	83.815	Labrus_bergylta
ENSTNIG00000011278	rbfox3b	99	68.250	ENSLACG00000018409	-	100	69.250	Latimeria_chalumnae
ENSTNIG00000011278	rbfox3b	99	75.802	ENSLOCG00000012267	rbfox3a	99	79.614	Lepisosteus_oculatus
ENSTNIG00000011278	rbfox3b	99	70.516	ENSLAFG00000016623	RBFOX3	99	71.007	Loxodonta_africana
ENSTNIG00000011278	rbfox3b	92	57.656	ENSMFAG00000002247	RBFOX3	100	65.903	Macaca_fascicularis
ENSTNIG00000011278	rbfox3b	82	71.687	ENSMMUG00000023028	RBFOX3	100	73.775	Macaca_mulatta
ENSTNIG00000011278	rbfox3b	82	71.386	ENSMNEG00000041147	RBFOX3	100	73.487	Macaca_nemestrina
ENSTNIG00000011278	rbfox3b	82	71.687	ENSMLEG00000025686	RBFOX3	100	73.775	Mandrillus_leucophaeus
ENSTNIG00000011278	rbfox3b	87	78.386	ENSMAMG00000019810	rbfox3b	100	77.810	Mastacembelus_armatus
ENSTNIG00000011278	rbfox3b	99	68.421	ENSMAMG00000020600	-	100	68.170	Mastacembelus_armatus
ENSTNIG00000011278	rbfox3b	100	82.250	ENSMZEG00005000781	rbfox3b	90	87.500	Maylandia_zebra
ENSTNIG00000011278	rbfox3b	91	57.682	ENSMZEG00005003055	-	89	57.951	Maylandia_zebra
ENSTNIG00000011278	rbfox3b	55	80.543	ENSMGAG00000005600	RBFOX3	97	69.259	Meleagris_gallopavo
ENSTNIG00000011278	rbfox3b	92	60.000	ENSMAUG00000013543	Rbfox3	100	63.797	Mesocricetus_auratus
ENSTNIG00000011278	rbfox3b	90	73.130	ENSMICG00000014898	RBFOX3	100	72.832	Microcebus_murinus
ENSTNIG00000011278	rbfox3b	92	58.095	ENSMOCG00000015373	Rbfox3	100	63.544	Microtus_ochrogaster
ENSTNIG00000011278	rbfox3b	99	78.535	ENSMMOG00000020193	rbfox3b	98	78.283	Mola_mola
ENSTNIG00000011278	rbfox3b	90	72.376	ENSMODG00000002089	RBFOX3	92	73.481	Monodelphis_domestica
ENSTNIG00000011278	rbfox3b	89	87.606	ENSMALG00000020407	rbfox3b	90	86.667	Monopterus_albus
ENSTNIG00000011278	rbfox3b	99	70.603	ENSMALG00000018270	-	97	70.000	Monopterus_albus
ENSTNIG00000011278	rbfox3b	92	66.220	MGP_CAROLIEiJ_G0017487	Rbfox3	100	76.163	Mus_caroli
ENSTNIG00000011278	rbfox3b	92	67.828	ENSMUSG00000025576	Rbfox3	100	76.163	Mus_musculus
ENSTNIG00000011278	rbfox3b	92	66.845	MGP_PahariEiJ_G0018614	Rbfox3	100	76.163	Mus_pahari
ENSTNIG00000011278	rbfox3b	92	66.488	MGP_SPRETEiJ_G0018331	Rbfox3	100	76.163	Mus_spretus
ENSTNIG00000011278	rbfox3b	99	67.391	ENSMPUG00000012319	RBFOX3	98	68.599	Mustela_putorius_furo
ENSTNIG00000011278	rbfox3b	92	59.286	ENSNGAG00000018006	Rbfox3	100	65.063	Nannospalax_galili
ENSTNIG00000011278	rbfox3b	95	64.567	ENSNBRG00000022885	-	96	64.491	Neolamprologus_brichardi
ENSTNIG00000011278	rbfox3b	89	87.324	ENSNBRG00000010102	rbfox3b	88	87.324	Neolamprologus_brichardi
ENSTNIG00000011278	rbfox3b	60	89.286	ENSNLEG00000000153	-	82	89.286	Nomascus_leucogenys
ENSTNIG00000011278	rbfox3b	82	46.950	ENSMEUG00000004218	-	100	49.235	Notamacropus_eugenii
ENSTNIG00000011278	rbfox3b	73	76.684	ENSOPRG00000016279	-	79	74.611	Ochotona_princeps
ENSTNIG00000011278	rbfox3b	82	72.973	ENSODEG00000009433	RBFOX3	100	72.989	Octodon_degus
ENSTNIG00000011278	rbfox3b	89	89.014	ENSONIG00000009549	rbfox3b	88	89.014	Oreochromis_niloticus
ENSTNIG00000011278	rbfox3b	91	73.626	ENSONIG00000007282	-	98	74.451	Oreochromis_niloticus
ENSTNIG00000011278	rbfox3b	72	59.801	ENSOCUG00000014217	RBFOX3	77	61.620	Oryctolagus_cuniculus
ENSTNIG00000011278	rbfox3b	99	82.532	ENSORLG00000000905	rbfox3b	71	86.704	Oryzias_latipes
ENSTNIG00000011278	rbfox3b	99	82.532	ENSORLG00020018030	rbfox3b	99	78.056	Oryzias_latipes_hni
ENSTNIG00000011278	rbfox3b	99	79.369	ENSORLG00015009200	rbfox3b	99	78.551	Oryzias_latipes_hsok
ENSTNIG00000011278	rbfox3b	71	80.731	ENSOMEG00000014677	rbfox3b	75	80.442	Oryzias_melastigma
ENSTNIG00000011278	rbfox3b	100	68.069	ENSOGAG00000029595	RBFOX3	99	69.059	Otolemur_garnettii
ENSTNIG00000011278	rbfox3b	99	54.815	ENSOARG00000002908	RBFOX3	100	55.288	Ovis_aries
ENSTNIG00000011278	rbfox3b	71	72.474	ENSPPAG00000025383	RBFOX3	99	72.188	Pan_paniscus
ENSTNIG00000011278	rbfox3b	82	61.290	ENSPPRG00000007819	RBFOX3	100	65.891	Panthera_pardus
ENSTNIG00000011278	rbfox3b	82	71.687	ENSPTRG00000009727	RBFOX3	100	73.775	Pan_troglodytes
ENSTNIG00000011278	rbfox3b	82	71.687	ENSPANG00000019837	RBFOX3	100	73.775	Papio_anubis
ENSTNIG00000011278	rbfox3b	100	75.434	ENSPKIG00000010299	rbfox3a	87	79.403	Paramormyrops_kingsleyae
ENSTNIG00000011278	rbfox3b	99	60.401	ENSPKIG00000022633	-	92	59.601	Paramormyrops_kingsleyae
ENSTNIG00000011278	rbfox3b	78	83.548	ENSPMGG00000008000	rbfox3b	86	82.581	Periophthalmus_magnuspinnatus
ENSTNIG00000011278	rbfox3b	92	58.571	ENSPEMG00000010500	Rbfox3	100	64.051	Peromyscus_maniculatus_bairdii
ENSTNIG00000011278	rbfox3b	62	59.004	ENSPMAG00000008689	rbfox3b	99	60.536	Petromyzon_marinus
ENSTNIG00000011278	rbfox3b	100	54.788	ENSPCIG00000005766	RBFOX3	100	65.394	Phascolarctos_cinereus
ENSTNIG00000011278	rbfox3b	99	83.797	ENSPFOG00000018294	rbfox3b	88	83.797	Poecilia_formosa
ENSTNIG00000011278	rbfox3b	78	75.884	ENSPLAG00000000481	rbfox3b	78	75.806	Poecilia_latipinna
ENSTNIG00000011278	rbfox3b	86	79.942	ENSPMEG00000022997	rbfox3b	100	79.942	Poecilia_mexicana
ENSTNIG00000011278	rbfox3b	91	87.363	ENSPREG00000012886	rbfox3b	95	88.089	Poecilia_reticulata
ENSTNIG00000011278	rbfox3b	99	61.055	ENSPPYG00000008704	RBFOX3	100	60.652	Pongo_abelii
ENSTNIG00000011278	rbfox3b	82	59.524	ENSPCAG00000001401	RBFOX3	100	63.104	Procavia_capensis
ENSTNIG00000011278	rbfox3b	86	62.595	ENSPCOG00000012689	RBFOX3	100	65.140	Propithecus_coquereli
ENSTNIG00000011278	rbfox3b	82	54.090	ENSPVAG00000015243	RBFOX3	100	58.376	Pteropus_vampyrus
ENSTNIG00000011278	rbfox3b	92	66.667	ENSPNYG00000009079	-	88	66.577	Pundamilia_nyererei
ENSTNIG00000011278	rbfox3b	90	75.346	ENSPNYG00000010414	rbfox3b	88	74.373	Pundamilia_nyererei
ENSTNIG00000011278	rbfox3b	99	71.891	ENSPNAG00000002889	rbfox3a	90	76.776	Pygocentrus_nattereri
ENSTNIG00000011278	rbfox3b	88	61.932	ENSPNAG00000018173	rbfox3b	99	60.705	Pygocentrus_nattereri
ENSTNIG00000011278	rbfox3b	82	70.958	ENSRNOG00000003386	Rbfox3	100	72.779	Rattus_norvegicus
ENSTNIG00000011278	rbfox3b	90	71.901	ENSRBIG00000040449	RBFOX3	92	73.003	Rhinopithecus_bieti
ENSTNIG00000011278	rbfox3b	82	71.687	ENSRROG00000000766	RBFOX3	100	73.775	Rhinopithecus_roxellana
ENSTNIG00000011278	rbfox3b	82	71.386	ENSSBOG00000031591	RBFOX3	100	73.487	Saimiri_boliviensis_boliviensis
ENSTNIG00000011278	rbfox3b	99	71.144	ENSSHAG00000016076	RBFOX3	100	71.642	Sarcophilus_harrisii
ENSTNIG00000011278	rbfox3b	100	74.690	ENSSFOG00015023260	rbfox3a	90	80.716	Scleropages_formosus
ENSTNIG00000011278	rbfox3b	89	67.956	ENSSFOG00015004716	RBFOX3	92	67.680	Scleropages_formosus
ENSTNIG00000011278	rbfox3b	89	73.743	ENSSMAG00000019052	-	100	73.988	Scophthalmus_maximus
ENSTNIG00000011278	rbfox3b	99	79.126	ENSSMAG00000012618	rbfox3b	77	84.946	Scophthalmus_maximus
ENSTNIG00000011278	rbfox3b	86	79.651	ENSSDUG00000023183	rbfox3b	100	79.651	Seriola_dumerili
ENSTNIG00000011278	rbfox3b	99	68.500	ENSSDUG00000015801	-	97	68.250	Seriola_dumerili
ENSTNIG00000011278	rbfox3b	90	88.056	ENSSLDG00000000149	rbfox3b	90	88.056	Seriola_lalandi_dorsalis
ENSTNIG00000011278	rbfox3b	100	69.154	ENSSLDG00000016098	-	99	69.900	Seriola_lalandi_dorsalis
ENSTNIG00000011278	rbfox3b	83	74.699	ENSSPUG00000011733	RBFOX3	99	75.145	Sphenodon_punctatus
ENSTNIG00000011278	rbfox3b	90	79.944	ENSSPAG00000017571	rbfox3b	89	79.339	Stegastes_partitus
ENSTNIG00000011278	rbfox3b	75	67.893	ENSSPAG00000004898	-	84	68.790	Stegastes_partitus
ENSTNIG00000011278	rbfox3b	76	71.475	ENSSSCG00000039498	RBFOX3	100	60.358	Sus_scrofa
ENSTNIG00000011278	rbfox3b	100	78.049	ENSTRUG00000004894	rbfox3b	98	77.561	Takifugu_rubripes
ENSTNIG00000011278	rbfox3b	55	51.504	ENSTBEG00000004296	-	89	46.556	Tupaia_belangeri
ENSTNIG00000011278	rbfox3b	82	56.878	ENSTTRG00000003676	RBFOX3	100	60.814	Tursiops_truncatus
ENSTNIG00000011278	rbfox3b	82	71.687	ENSUAMG00000004668	RBFOX3	100	74.063	Ursus_americanus
ENSTNIG00000011278	rbfox3b	99	68.672	ENSVVUG00000017864	RBFOX3	100	73.775	Vulpes_vulpes
ENSTNIG00000011278	rbfox3b	99	63.889	ENSXETG00000020236	rbfox3	98	63.889	Xenopus_tropicalis
ENSTNIG00000011278	rbfox3b	89	87.360	ENSXCOG00000018262	rbfox3b	100	83.382	Xiphophorus_couchianus
ENSTNIG00000011278	rbfox3b	100	82.750	ENSXMAG00000012939	rbfox3b	88	89.014	Xiphophorus_maculatus