EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000011281 (Gene tree)
Gene ID: -
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: TSEN54 tRNA splicing endonuclease subunit
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2603 bases
Position: chr3:14624726-14627328
Accession: ZDB-GENE-050522-454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000014220	tRNA_int_end_N2	PF12928.7	9.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000014418	-	1518	-	ENSTNIP00000014220	505 (aa)	-	H3D134

Gene Model

Click here to download ENSTNIG00000011281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000011281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000011281	tsen54	99	44.423	ENSG00000182173	TSEN54	100	63.889	Homo_sapiens
ENSTNIG00000011281	tsen54	98	67.061	ENSAPOG00000009659	tsen54	100	63.380	Acanthochromis_polyacanthus
ENSTNIG00000011281	tsen54	98	67.404	ENSAOCG00000000152	tsen54	95	66.734	Amphiprion_ocellaris
ENSTNIG00000011281	tsen54	98	67.203	ENSAPEG00000018931	tsen54	94	66.532	Amphiprion_percula
ENSTNIG00000011281	tsen54	98	61.776	ENSATEG00000019860	tsen54	97	62.330	Anabas_testudineus
ENSTNIG00000011281	tsen54	98	44.677	ENSACAG00000006714	TSEN54	97	44.129	Anolis_carolinensis
ENSTNIG00000011281	tsen54	99	44.933	ENSANAG00000024061	TSEN54	98	44.656	Aotus_nancymaae
ENSTNIG00000011281	tsen54	98	65.936	ENSACLG00000019800	tsen54	96	65.269	Astatotilapia_calliptera
ENSTNIG00000011281	tsen54	97	57.199	ENSAMXG00000006546	tsen54	96	57.228	Astyanax_mexicanus
ENSTNIG00000011281	tsen54	99	44.933	ENSCJAG00000014278	TSEN54	98	44.972	Callithrix_jacchus
ENSTNIG00000011281	tsen54	97	44.701	ENSCAFG00000004798	TSEN54	96	44.031	Canis_familiaris
ENSTNIG00000011281	tsen54	97	44.701	ENSCAFG00020000312	TSEN54	96	44.031	Canis_lupus_dingo
ENSTNIG00000011281	tsen54	99	44.530	ENSCHIG00000019908	TSEN54	99	44.123	Capra_hircus
ENSTNIG00000011281	tsen54	97	44.922	ENSCATG00000042877	TSEN54	98	42.533	Cercocebus_atys
ENSTNIG00000011281	tsen54	97	44.902	ENSCLAG00000002924	TSEN54	98	43.633	Chinchilla_lanigera
ENSTNIG00000011281	tsen54	99	44.906	ENSCSAG00000004809	TSEN54	99	45.143	Chlorocebus_sabaeus
ENSTNIG00000011281	tsen54	99	44.802	ENSCANG00000028053	TSEN54	61	65.179	Colobus_angolensis_palliatus
ENSTNIG00000011281	tsen54	99	44.338	ENSCGRG00001020029	Tsen54	98	44.530	Cricetulus_griseus_chok1gshd
ENSTNIG00000011281	tsen54	85	41.798	ENSCGRG00000016289	Tsen54	99	42.022	Cricetulus_griseus_crigri
ENSTNIG00000011281	tsen54	81	51.643	ENSCSEG00000020586	tsen54	99	51.449	Cynoglossus_semilaevis
ENSTNIG00000011281	tsen54	81	54.126	ENSDARG00000036844	tsen54	100	54.369	Danio_rerio
ENSTNIG00000011281	tsen54	99	45.524	ENSDORG00000004073	Tsen54	99	45.333	Dipodomys_ordii
ENSTNIG00000011281	tsen54	75	44.595	ENSEBUG00000005203	TSEN54	55	44.595	Eptatretus_burgeri
ENSTNIG00000011281	tsen54	99	44.318	ENSECAG00000004924	TSEN54	98	43.511	Equus_caballus
ENSTNIG00000011281	tsen54	99	43.797	ENSFCAG00000023712	TSEN54	99	44.112	Felis_catus
ENSTNIG00000011281	tsen54	94	45.000	ENSFALG00000001119	TSEN54	92	43.089	Ficedula_albicollis
ENSTNIG00000011281	tsen54	87	42.826	ENSFDAG00000019090	TSEN54	99	39.615	Fukomys_damarensis
ENSTNIG00000011281	tsen54	98	65.191	ENSFHEG00000005470	tsen54	96	63.241	Fundulus_heteroclitus
ENSTNIG00000011281	tsen54	86	57.447	ENSGMOG00000013146	tsen54	99	57.627	Gadus_morhua
ENSTNIG00000011281	tsen54	97	42.553	ENSGALG00000047163	TSEN54	99	41.393	Gallus_gallus
ENSTNIG00000011281	tsen54	98	65.720	ENSGAFG00000005111	tsen54	96	65.051	Gambusia_affinis
ENSTNIG00000011281	tsen54	98	59.400	ENSGACG00000014987	tsen54	100	58.835	Gasterosteus_aculeatus
ENSTNIG00000011281	tsen54	97	45.117	ENSGGOG00000009417	TSEN54	99	45.365	Gorilla_gorilla
ENSTNIG00000011281	tsen54	88	63.274	ENSHBUG00000018296	tsen54	88	62.528	Haplochromis_burtoni
ENSTNIG00000011281	tsen54	97	46.838	ENSHGLG00000007979	TSEN54	77	64.286	Heterocephalus_glaber_female
ENSTNIG00000011281	tsen54	97	45.850	ENSHGLG00100005497	TSEN54	77	61.538	Heterocephalus_glaber_male
ENSTNIG00000011281	tsen54	82	58.993	ENSHCOG00000007481	tsen54	100	58.753	Hippocampus_comes
ENSTNIG00000011281	tsen54	99	51.758	ENSIPUG00000000590	tsen54	96	50.800	Ictalurus_punctatus
ENSTNIG00000011281	tsen54	99	44.656	ENSJJAG00000007365	Tsen54	77	62.983	Jaculus_jaculus
ENSTNIG00000011281	tsen54	98	63.495	ENSKMAG00000006944	tsen54	97	63.230	Kryptolebias_marmoratus
ENSTNIG00000011281	tsen54	98	65.278	ENSLBEG00000004199	tsen54	97	63.095	Labrus_bergylta
ENSTNIG00000011281	tsen54	97	38.931	ENSLACG00000009497	TSEN54	81	59.172	Latimeria_chalumnae
ENSTNIG00000011281	tsen54	97	54.457	ENSLOCG00000011191	tsen54	96	52.233	Lepisosteus_oculatus
ENSTNIG00000011281	tsen54	99	44.991	ENSMFAG00000000712	TSEN54	99	45.229	Macaca_fascicularis
ENSTNIG00000011281	tsen54	99	44.991	ENSMNEG00000029199	TSEN54	99	45.180	Macaca_nemestrina
ENSTNIG00000011281	tsen54	87	43.137	ENSMLEG00000044168	TSEN54	88	43.392	Mandrillus_leucophaeus
ENSTNIG00000011281	tsen54	98	63.905	ENSMAMG00000019773	tsen54	97	62.948	Mastacembelus_armatus
ENSTNIG00000011281	tsen54	98	65.538	ENSMZEG00005000884	tsen54	96	64.870	Maylandia_zebra
ENSTNIG00000011281	tsen54	93	43.574	ENSMGAG00000009556	TSEN54	92	43.086	Meleagris_gallopavo
ENSTNIG00000011281	tsen54	99	44.530	ENSMAUG00000016838	Tsen54	98	44.722	Mesocricetus_auratus
ENSTNIG00000011281	tsen54	99	44.234	ENSMICG00000044012	TSEN54	99	45.665	Microcebus_murinus
ENSTNIG00000011281	tsen54	99	45.489	ENSMOCG00000021585	Tsen54	98	45.298	Microtus_ochrogaster
ENSTNIG00000011281	tsen54	97	62.124	ENSMMOG00000020189	tsen54	99	63.126	Mola_mola
ENSTNIG00000011281	tsen54	99	63.862	ENSMALG00000020573	tsen54	96	64.764	Monopterus_albus
ENSTNIG00000011281	tsen54	99	45.247	ENSMUSG00000020781	Tsen54	99	44.677	Mus_musculus
ENSTNIG00000011281	tsen54	99	44.925	MGP_PahariEiJ_G0018547	Tsen54	77	62.088	Mus_pahari
ENSTNIG00000011281	tsen54	99	45.161	MGP_SPRETEiJ_G0018262	Tsen54	99	44.592	Mus_spretus
ENSTNIG00000011281	tsen54	97	44.444	ENSMLUG00000015298	TSEN54	99	43.133	Myotis_lucifugus
ENSTNIG00000011281	tsen54	99	45.402	ENSNGAG00000015673	Tsen54	99	44.595	Nannospalax_galili
ENSTNIG00000011281	tsen54	89	40.725	ENSMEUG00000011908	TSEN54	99	39.574	Notamacropus_eugenii
ENSTNIG00000011281	tsen54	97	41.851	ENSOPRG00000012513	TSEN54	95	41.650	Ochotona_princeps
ENSTNIG00000011281	tsen54	98	65.476	ENSONIG00000009543	tsen54	96	65.010	Oreochromis_niloticus
ENSTNIG00000011281	tsen54	98	62.677	ENSORLG00000000852	tsen54	97	61.538	Oryzias_latipes
ENSTNIG00000011281	tsen54	98	63.083	ENSORLG00020018221	tsen54	97	61.943	Oryzias_latipes_hni
ENSTNIG00000011281	tsen54	98	62.677	ENSORLG00015009413	tsen54	98	61.000	Oryzias_latipes_hsok
ENSTNIG00000011281	tsen54	98	62.903	ENSOMEG00000014402	tsen54	94	61.492	Oryzias_melastigma
ENSTNIG00000011281	tsen54	97	43.333	ENSOGAG00000001442	TSEN54	96	44.291	Otolemur_garnettii
ENSTNIG00000011281	tsen54	95	43.936	ENSPPAG00000043519	TSEN54	99	44.135	Pan_paniscus
ENSTNIG00000011281	tsen54	99	43.985	ENSPPRG00000009162	TSEN54	99	44.299	Panthera_pardus
ENSTNIG00000011281	tsen54	87	42.358	ENSPTIG00000019312	TSEN54	96	42.325	Panthera_tigris_altaica
ENSTNIG00000011281	tsen54	99	44.612	ENSPTRG00000009646	TSEN54	99	45.038	Pan_troglodytes
ENSTNIG00000011281	tsen54	99	45.117	ENSPANG00000020133	TSEN54	62	66.071	Papio_anubis
ENSTNIG00000011281	tsen54	97	53.497	ENSPKIG00000023018	tsen54	99	50.358	Paramormyrops_kingsleyae
ENSTNIG00000011281	tsen54	94	47.401	ENSPMGG00000019578	tsen54	100	45.756	Periophthalmus_magnuspinnatus
ENSTNIG00000011281	tsen54	99	44.914	ENSPEMG00000014857	Tsen54	98	44.530	Peromyscus_maniculatus_bairdii
ENSTNIG00000011281	tsen54	98	65.795	ENSPFOG00000022740	tsen54	96	64.000	Poecilia_formosa
ENSTNIG00000011281	tsen54	98	66.126	ENSPLAG00000014847	tsen54	96	64.315	Poecilia_latipinna
ENSTNIG00000011281	tsen54	98	65.923	ENSPMEG00000022876	tsen54	96	64.113	Poecilia_mexicana
ENSTNIG00000011281	tsen54	98	66.397	ENSPREG00000013090	tsen54	96	65.587	Poecilia_reticulata
ENSTNIG00000011281	tsen54	72	64.085	ENSPPYG00000008629	TSEN54	77	64.085	Pongo_abelii
ENSTNIG00000011281	tsen54	70	65.132	ENSPCAG00000002093	TSEN54	71	65.132	Procavia_capensis
ENSTNIG00000011281	tsen54	97	43.470	ENSPCOG00000027880	TSEN54	78	62.921	Propithecus_coquereli
ENSTNIG00000011281	tsen54	95	64.682	ENSPNYG00000010217	tsen54	100	63.136	Pundamilia_nyererei
ENSTNIG00000011281	tsen54	97	56.275	ENSPNAG00000003770	tsen54	96	55.819	Pygocentrus_nattereri
ENSTNIG00000011281	tsen54	99	45.817	ENSRNOG00000004598	Tsen54	98	45.437	Rattus_norvegicus
ENSTNIG00000011281	tsen54	99	44.612	ENSRBIG00000043040	TSEN54	61	66.071	Rhinopithecus_bieti
ENSTNIG00000011281	tsen54	99	42.884	ENSSBOG00000013543	TSEN54	98	42.557	Saimiri_boliviensis_boliviensis
ENSTNIG00000011281	tsen54	97	44.788	ENSSHAG00000018127	TSEN54	95	41.899	Sarcophilus_harrisii
ENSTNIG00000011281	tsen54	81	52.844	ENSSFOG00015004093	tsen54	99	52.246	Scleropages_formosus
ENSTNIG00000011281	tsen54	98	61.942	ENSSMAG00000012449	tsen54	98	62.818	Scophthalmus_maximus
ENSTNIG00000011281	tsen54	98	65.444	ENSSDUG00000021506	tsen54	97	64.479	Seriola_dumerili
ENSTNIG00000011281	tsen54	98	65.251	ENSSLDG00000016303	tsen54	97	64.093	Seriola_lalandi_dorsalis
ENSTNIG00000011281	tsen54	80	44.084	ENSSPUG00000008988	TSEN54	96	43.218	Sphenodon_punctatus
ENSTNIG00000011281	tsen54	82	59.905	ENSSPAG00000008047	tsen54	100	60.241	Stegastes_partitus
ENSTNIG00000011281	tsen54	94	65.496	ENSSPAG00000008098	-	100	65.417	Stegastes_partitus
ENSTNIG00000011281	tsen54	97	45.631	ENSSSCG00000036852	TSEN54	96	44.423	Sus_scrofa
ENSTNIG00000011281	tsen54	87	43.750	ENSTGUG00000008548	TSEN54	99	42.299	Taeniopygia_guttata
ENSTNIG00000011281	tsen54	98	76.113	ENSTRUG00000004230	tsen54	96	74.848	Takifugu_rubripes
ENSTNIG00000011281	tsen54	81	40.961	ENSUAMG00000010045	TSEN54	67	64.286	Ursus_americanus
ENSTNIG00000011281	tsen54	84	41.556	ENSUMAG00000008979	TSEN54	54	44.444	Ursus_maritimus
ENSTNIG00000011281	tsen54	99	44.510	ENSXETG00000012532	tsen54	97	64.912	Xenopus_tropicalis
ENSTNIG00000011281	tsen54	98	59.118	ENSXCOG00000018245	tsen54	100	58.852	Xiphophorus_couchianus
ENSTNIG00000011281	tsen54	98	66.533	ENSXMAG00000018818	tsen54	96	66.397	Xiphophorus_maculatus