EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000011300 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: si:dkey-16l2.16
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2405 bases
Position: chr3:14490167-14492571
Accession: ZDB-GENE-141219-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000014239	MMR_HSR1	PF01926.23	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000014437	-	1123	-	ENSTNIP00000014239	209 (aa)	-	H3D153

Gene Model

Click here to download ENSTNIG00000011300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000011300's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000011300	si:dkey-16l2.16	89	42.932	ENSTNIG00000010122	rab33a	73	45.349
ENSTNIG00000011300	si:dkey-16l2.16	79	43.956	ENSTNIG00000010125	rab33ba	75	43.956
ENSTNIG00000011300	si:dkey-16l2.16	78	35.542	ENSTNIG00000016158	rab34b	64	35.542
ENSTNIG00000011300	si:dkey-16l2.16	73	37.580	ENSTNIG00000016831	RAB41	73	37.580
ENSTNIG00000011300	si:dkey-16l2.16	77	31.000	ENSTNIG00000013920	rab20	83	31.000
ENSTNIG00000011300	si:dkey-16l2.16	77	33.750	ENSTNIG00000016575	rab23	76	33.146
ENSTNIG00000011300	si:dkey-16l2.16	82	45.977	ENSTNIG00000001260	RAB15	82	45.714
ENSTNIG00000011300	si:dkey-16l2.16	74	37.500	ENSTNIG00000001195	rab9a	86	34.857
ENSTNIG00000011300	si:dkey-16l2.16	74	31.613	ENSTNIG00000013137	ran	71	31.613
ENSTNIG00000011300	si:dkey-16l2.16	57	31.343	ENSTNIG00000005278	arfrp1	93	31.343
ENSTNIG00000011300	si:dkey-16l2.16	95	39.901	ENSTNIG00000002003	-	82	42.515
ENSTNIG00000011300	si:dkey-16l2.16	96	36.816	ENSTNIG00000011711	rab5c	76	40.719
ENSTNIG00000011300	si:dkey-16l2.16	73	30.519	ENSTNIG00000017844	-	82	30.519
ENSTNIG00000011300	si:dkey-16l2.16	86	33.333	ENSTNIG00000001043	si:ch211-247i17.1	84	33.728
ENSTNIG00000011300	si:dkey-16l2.16	55	37.069	ENSTNIG00000006917	si:cabz01085950.1	88	37.069
ENSTNIG00000011300	si:dkey-16l2.16	78	37.805	ENSTNIG00000018267	rab22a	85	37.805
ENSTNIG00000011300	si:dkey-16l2.16	81	38.202	ENSTNIG00000016231	rab34a	68	37.853
ENSTNIG00000011300	si:dkey-16l2.16	75	45.570	ENSTNIG00000004004	-	86	45.570
ENSTNIG00000011300	si:dkey-16l2.16	84	45.198	ENSTNIG00000007882	rab18b	79	47.561
ENSTNIG00000011300	si:dkey-16l2.16	87	47.253	ENSTNIG00000018319	-	85	49.412
ENSTNIG00000011300	si:dkey-16l2.16	99	41.784	ENSTNIG00000016414	rab15	82	46.552
ENSTNIG00000011300	si:dkey-16l2.16	77	39.394	ENSTNIG00000015257	rab6bb	74	38.961
ENSTNIG00000011300	si:dkey-16l2.16	78	42.683	ENSTNIG00000009039	rab14	74	42.683
ENSTNIG00000011300	si:dkey-16l2.16	73	39.869	ENSTNIG00000008784	-	94	39.869
ENSTNIG00000011300	si:dkey-16l2.16	73	31.579	ENSTNIG00000017951	rabl2	70	31.481
ENSTNIG00000011300	si:dkey-16l2.16	78	36.095	ENSTNIG00000011114	-	83	35.260
ENSTNIG00000011300	si:dkey-16l2.16	55	30.172	ENSTNIG00000004344	arl3	61	30.172
ENSTNIG00000011300	si:dkey-16l2.16	98	40.670	ENSTNIG00000013182	-	81	43.678
ENSTNIG00000011300	si:dkey-16l2.16	98	41.148	ENSTNIG00000013184	-	80	43.678
ENSTNIG00000011300	si:dkey-16l2.16	80	42.262	ENSTNIG00000009196	rab5aa	78	42.262
ENSTNIG00000011300	si:dkey-16l2.16	78	35.503	ENSTNIG00000014591	rheb	88	35.503
ENSTNIG00000011300	si:dkey-16l2.16	85	41.111	ENSTNIG00000015000	zgc:101559	76	41.667
ENSTNIG00000011300	si:dkey-16l2.16	79	45.509	ENSTNIG00000018498	-	74	45.509
ENSTNIG00000011300	si:dkey-16l2.16	78	36.196	ENSTNIG00000001448	-	98	35.758
ENSTNIG00000011300	si:dkey-16l2.16	78	33.735	ENSTNIG00000011385	hrasb	87	33.735
ENSTNIG00000011300	si:dkey-16l2.16	78	36.095	ENSTNIG00000014604	RAB7A	83	35.260
ENSTNIG00000011300	si:dkey-16l2.16	74	32.919	ENSTNIG00000006596	dnajc27	59	32.919
ENSTNIG00000011300	si:dkey-16l2.16	77	46.386	ENSTNIG00000003679	-	75	47.531
ENSTNIG00000011300	si:dkey-16l2.16	79	32.544	ENSTNIG00000007566	si:ch73-116o1.2	79	31.953
ENSTNIG00000011300	si:dkey-16l2.16	69	45.695	ENSTNIG00000012343	-	64	45.695
ENSTNIG00000011300	si:dkey-16l2.16	97	42.439	ENSTNIG00000006650	RAB19	77	46.707
ENSTNIG00000011300	si:dkey-16l2.16	74	61.935	ENSTNIG00000004511	-	96	61.935
ENSTNIG00000011300	si:dkey-16l2.16	81	45.029	ENSTNIG00000008717	rab18a	83	45.029
ENSTNIG00000011300	si:dkey-16l2.16	75	42.683	ENSTNIG00000005090	rab25a	75	42.683
ENSTNIG00000011300	si:dkey-16l2.16	83	32.571	ENSTNIG00000012154	kras	85	33.951
ENSTNIG00000011300	si:dkey-16l2.16	98	40.191	ENSTNIG00000011081	rab11bb	80	43.678
ENSTNIG00000011300	si:dkey-16l2.16	82	34.872	ENSTNIG00000001956	RAB9A	91	35.233
ENSTNIG00000011300	si:dkey-16l2.16	74	44.231	ENSTNIG00000003472	rab2a	73	44.231
ENSTNIG00000011300	si:dkey-16l2.16	55	30.172	ENSTNIG00000014233	arl3l2	59	30.172
ENSTNIG00000011300	si:dkey-16l2.16	81	39.766	ENSTNIG00000014859	rab12	71	39.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000011300	si:dkey-16l2.16	100	94.258	ENSAPOG00000008263	si:dkey-16l2.16	100	94.258	Acanthochromis_polyacanthus
ENSTNIG00000011300	si:dkey-16l2.16	100	94.737	ENSAOCG00000016825	si:dkey-16l2.16	100	94.737	Amphiprion_ocellaris
ENSTNIG00000011300	si:dkey-16l2.16	100	94.737	ENSAPEG00000006500	si:dkey-16l2.16	100	94.737	Amphiprion_percula
ENSTNIG00000011300	si:dkey-16l2.16	100	94.737	ENSATEG00000019238	si:dkey-16l2.16	100	94.737	Anabas_testudineus
ENSTNIG00000011300	si:dkey-16l2.16	100	93.780	ENSACLG00000018721	si:dkey-16l2.16	100	93.780	Astatotilapia_calliptera
ENSTNIG00000011300	si:dkey-16l2.16	100	94.737	ENSAMXG00000038243	si:dkey-16l2.16	100	94.737	Astyanax_mexicanus
ENSTNIG00000011300	si:dkey-16l2.16	56	97.458	ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	Cynoglossus_semilaevis
ENSTNIG00000011300	si:dkey-16l2.16	100	94.737	ENSCVAG00000003537	si:dkey-16l2.16	100	94.737	Cyprinodon_variegatus
ENSTNIG00000011300	si:dkey-16l2.16	100	92.344	ENSDARG00000037967	si:dkey-16l2.16	99	96.610	Danio_rerio
ENSTNIG00000011300	si:dkey-16l2.16	99	87.019	ENSELUG00000023247	si:dkey-16l2.16	99	85.577	Esox_lucius
ENSTNIG00000011300	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSTNIG00000011300	si:dkey-16l2.16	77	83.851	ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	Gadus_morhua
ENSTNIG00000011300	si:dkey-16l2.16	100	88.995	ENSGAFG00000005388	si:dkey-16l2.16	100	88.995	Gambusia_affinis
ENSTNIG00000011300	si:dkey-16l2.16	100	92.344	ENSGACG00000014915	si:dkey-16l2.16	98	92.344	Gasterosteus_aculeatus
ENSTNIG00000011300	si:dkey-16l2.16	100	94.258	ENSHBUG00000019261	si:dkey-16l2.16	100	94.258	Haplochromis_burtoni
ENSTNIG00000011300	si:dkey-16l2.16	100	93.301	ENSHCOG00000006538	si:dkey-16l2.16	100	93.301	Hippocampus_comes
ENSTNIG00000011300	si:dkey-16l2.16	100	91.866	ENSKMAG00000003494	si:dkey-16l2.16	100	91.866	Kryptolebias_marmoratus
ENSTNIG00000011300	si:dkey-16l2.16	100	94.737	ENSLBEG00000007681	si:dkey-16l2.16	100	94.737	Labrus_bergylta
ENSTNIG00000011300	si:dkey-16l2.16	100	94.258	ENSMAMG00000019230	si:dkey-16l2.16	100	94.258	Mastacembelus_armatus
ENSTNIG00000011300	si:dkey-16l2.16	100	93.780	ENSMZEG00005002081	si:dkey-16l2.16	100	93.780	Maylandia_zebra
ENSTNIG00000011300	si:dkey-16l2.16	99	94.660	ENSMMOG00000020140	si:dkey-16l2.16	97	94.660	Mola_mola
ENSTNIG00000011300	si:dkey-16l2.16	100	93.301	ENSMALG00000014727	si:dkey-16l2.16	99	93.301	Monopterus_albus
ENSTNIG00000011300	si:dkey-16l2.16	100	94.737	ENSNBRG00000008930	si:dkey-16l2.16	100	94.737	Neolamprologus_brichardi
ENSTNIG00000011300	si:dkey-16l2.16	100	93.780	ENSONIG00000009443	si:dkey-16l2.16	100	93.780	Oreochromis_niloticus
ENSTNIG00000011300	si:dkey-16l2.16	100	89.952	ENSORLG00000001098	si:dkey-16l2.16	99	89.952	Oryzias_latipes
ENSTNIG00000011300	si:dkey-16l2.16	100	89.952	ENSORLG00020000867	si:dkey-16l2.16	99	89.952	Oryzias_latipes_hni
ENSTNIG00000011300	si:dkey-16l2.16	100	87.560	ENSOMEG00000015474	si:dkey-16l2.16	100	87.560	Oryzias_melastigma
ENSTNIG00000011300	si:dkey-16l2.16	100	92.823	ENSPKIG00000005686	-	100	92.823	Paramormyrops_kingsleyae
ENSTNIG00000011300	si:dkey-16l2.16	100	79.426	ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	Paramormyrops_kingsleyae
ENSTNIG00000011300	si:dkey-16l2.16	100	93.301	ENSPMGG00000000751	si:dkey-16l2.16	100	93.301	Periophthalmus_magnuspinnatus
ENSTNIG00000011300	si:dkey-16l2.16	100	89.474	ENSPFOG00000004746	si:dkey-16l2.16	100	89.474	Poecilia_formosa
ENSTNIG00000011300	si:dkey-16l2.16	100	88.995	ENSPLAG00000021043	si:dkey-16l2.16	100	88.995	Poecilia_latipinna
ENSTNIG00000011300	si:dkey-16l2.16	100	89.474	ENSPMEG00000007165	si:dkey-16l2.16	100	89.474	Poecilia_mexicana
ENSTNIG00000011300	si:dkey-16l2.16	100	88.995	ENSPREG00000005323	si:dkey-16l2.16	100	88.995	Poecilia_reticulata
ENSTNIG00000011300	si:dkey-16l2.16	100	94.258	ENSPNYG00000009490	si:dkey-16l2.16	100	94.258	Pundamilia_nyererei
ENSTNIG00000011300	si:dkey-16l2.16	100	93.780	ENSPNAG00000018986	si:dkey-16l2.16	100	93.780	Pygocentrus_nattereri
ENSTNIG00000011300	si:dkey-16l2.16	100	92.344	ENSSFOG00015021448	-	100	92.344	Scleropages_formosus
ENSTNIG00000011300	si:dkey-16l2.16	99	80.769	ENSSFOG00015006414	-	93	78.061	Scleropages_formosus
ENSTNIG00000011300	si:dkey-16l2.16	100	89.474	ENSSMAG00000011769	si:dkey-16l2.16	94	89.474	Scophthalmus_maximus
ENSTNIG00000011300	si:dkey-16l2.16	100	95.694	ENSSDUG00000005719	si:dkey-16l2.16	100	95.694	Seriola_dumerili
ENSTNIG00000011300	si:dkey-16l2.16	100	95.694	ENSSLDG00000003631	si:dkey-16l2.16	100	95.694	Seriola_lalandi_dorsalis
ENSTNIG00000011300	si:dkey-16l2.16	100	95.215	ENSSPAG00000006302	si:dkey-16l2.16	100	95.215	Stegastes_partitus
ENSTNIG00000011300	si:dkey-16l2.16	100	96.651	ENSTRUG00000025076	si:dkey-16l2.16	100	96.651	Takifugu_rubripes
ENSTNIG00000011300	si:dkey-16l2.16	100	89.474	ENSXMAG00000021767	si:dkey-16l2.16	100	89.474	Xiphophorus_maculatus