EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000011595 (Gene tree)
Gene ID: -
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2876 bases
Position: chrUn_random:6948940-6951815
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000014545	RRM_1	PF00076.22	4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000014744	-	1160	-	ENSTNIP00000014545	242 (aa)	-	H3D207

Gene Model

Click here to download ENSTNIG00000011595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000011595's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000011595	alyref	100	51.737	ENSTNIG00000014136	-	100	47.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000011595	alyref	100	53.208	ENSAPOG00000000183	-	100	49.818	Acanthochromis_polyacanthus
ENSTNIG00000011595	alyref	99	72.527	ENSACIG00000006351	alyref	98	75.090	Amphilophus_citrinellus
ENSTNIG00000011595	alyref	100	51.673	ENSACIG00000020351	-	100	53.704	Amphilophus_citrinellus
ENSTNIG00000011595	alyref	100	70.073	ENSAOCG00000014012	alyref	100	75.362	Amphiprion_ocellaris
ENSTNIG00000011595	alyref	100	53.053	ENSAOCG00000019305	-	100	50.730	Amphiprion_ocellaris
ENSTNIG00000011595	alyref	100	70.073	ENSAPEG00000014603	alyref	100	75.362	Amphiprion_percula
ENSTNIG00000011595	alyref	100	54.167	ENSAPEG00000013527	-	100	50.730	Amphiprion_percula
ENSTNIG00000011595	alyref	100	52.747	ENSATEG00000000382	-	100	53.214	Anabas_testudineus
ENSTNIG00000011595	alyref	100	67.986	ENSATEG00000004307	alyref	100	74.468	Anabas_testudineus
ENSTNIG00000011595	alyref	59	69.014	ENSAPLG00000014745	-	100	72.535	Anas_platyrhynchos
ENSTNIG00000011595	alyref	100	75.182	ENSACLG00000008432	alyref	100	76.895	Astatotilapia_calliptera
ENSTNIG00000011595	alyref	100	53.933	ENSACLG00000010184	-	100	49.135	Astatotilapia_calliptera
ENSTNIG00000011595	alyref	100	65.957	ENSAMXG00000007359	alyref	100	68.310	Astyanax_mexicanus
ENSTNIG00000011595	alyref	66	49.468	ENSCING00000013568	-	99	44.643	Ciona_intestinalis
ENSTNIG00000011595	alyref	99	40.977	ENSCSAVG00000003324	-	99	43.431	Ciona_savignyi
ENSTNIG00000011595	alyref	100	72.628	ENSCSEG00000017800	alyref	100	73.091	Cynoglossus_semilaevis
ENSTNIG00000011595	alyref	100	48.106	ENSCVAG00000007789	-	100	47.212	Cyprinodon_variegatus
ENSTNIG00000011595	alyref	100	76.923	ENSCVAG00000014869	alyref	100	79.562	Cyprinodon_variegatus
ENSTNIG00000011595	alyref	100	68.310	ENSDARG00000077732	alyref	100	69.718	Danio_rerio
ENSTNIG00000011595	alyref	97	43.273	FBgn0010774	Ref1	98	40.959	Drosophila_melanogaster
ENSTNIG00000011595	alyref	99	48.699	ENSEBUG00000008253	alyref	95	50.554	Eptatretus_burgeri
ENSTNIG00000011595	alyref	100	46.559	ENSEBUG00000006305	alyref	100	46.614	Eptatretus_burgeri
ENSTNIG00000011595	alyref	100	64.982	ENSELUG00000017178	alyref	100	71.223	Esox_lucius
ENSTNIG00000011595	alyref	100	60.769	ENSELUG00000008849	-	100	58.571	Esox_lucius
ENSTNIG00000011595	alyref	68	73.939	ENSFALG00000011923	-	96	74.051	Ficedula_albicollis
ENSTNIG00000011595	alyref	100	48.134	ENSFHEG00000004698	-	100	45.818	Fundulus_heteroclitus
ENSTNIG00000011595	alyref	100	69.455	ENSFHEG00000019426	alyref	100	75.273	Fundulus_heteroclitus
ENSTNIG00000011595	alyref	100	64.599	ENSGMOG00000009882	alyref	100	63.763	Gadus_morhua
ENSTNIG00000011595	alyref	79	53.589	ENSGMOG00000013122	-	100	57.360	Gadus_morhua
ENSTNIG00000011595	alyref	100	74.101	ENSGAFG00000006014	alyref	100	75.540	Gambusia_affinis
ENSTNIG00000011595	alyref	100	45.865	ENSGAFG00000007573	-	100	46.388	Gambusia_affinis
ENSTNIG00000011595	alyref	100	75.182	ENSHBUG00000020196	alyref	100	76.895	Haplochromis_burtoni
ENSTNIG00000011595	alyref	100	52.963	ENSHBUG00000001454	-	100	51.246	Haplochromis_burtoni
ENSTNIG00000011595	alyref	98	50.407	ENSHCOG00000012825	-	94	50.996	Hippocampus_comes
ENSTNIG00000011595	alyref	100	66.071	ENSIPUG00000009469	alyref	100	67.857	Ictalurus_punctatus
ENSTNIG00000011595	alyref	84	61.463	ENSSTOG00000016570	-	92	65.128	Ictidomys_tridecemlineatus
ENSTNIG00000011595	alyref	100	50.943	ENSKMAG00000006462	-	100	50.000	Kryptolebias_marmoratus
ENSTNIG00000011595	alyref	100	68.231	ENSKMAG00000008912	alyref	100	73.477	Kryptolebias_marmoratus
ENSTNIG00000011595	alyref	100	79.608	ENSLBEG00000023118	alyref	90	80.392	Labrus_bergylta
ENSTNIG00000011595	alyref	99	48.649	ENSLBEG00000012930	-	99	44.604	Labrus_bergylta
ENSTNIG00000011595	alyref	100	49.281	ENSLBEG00000005387	-	100	49.822	Labrus_bergylta
ENSTNIG00000011595	alyref	88	69.545	ENSLOCG00000013879	alyref	91	67.544	Lepisosteus_oculatus
ENSTNIG00000011595	alyref	100	71.739	ENSMAMG00000003034	alyref	100	75.812	Mastacembelus_armatus
ENSTNIG00000011595	alyref	100	51.923	ENSMAMG00000005464	-	100	49.630	Mastacembelus_armatus
ENSTNIG00000011595	alyref	100	53.558	ENSMZEG00005012096	-	100	48.789	Maylandia_zebra
ENSTNIG00000011595	alyref	100	75.182	ENSMZEG00005008639	alyref	100	76.895	Maylandia_zebra
ENSTNIG00000011595	alyref	99	50.207	ENSMMOG00000007032	-	98	49.412	Mola_mola
ENSTNIG00000011595	alyref	99	72.325	ENSMMOG00000012458	alyref	97	72.993	Mola_mola
ENSTNIG00000011595	alyref	100	53.788	ENSMALG00000006054	-	100	47.917	Monopterus_albus
ENSTNIG00000011595	alyref	100	55.474	ENSMLUG00000004098	-	100	56.934	Myotis_lucifugus
ENSTNIG00000011595	alyref	98	51.095	ENSMLUG00000022178	-	98	51.648	Myotis_lucifugus
ENSTNIG00000011595	alyref	98	52.941	ENSMLUG00000009247	-	98	53.676	Myotis_lucifugus
ENSTNIG00000011595	alyref	100	53.025	ENSMLUG00000006521	-	100	54.839	Myotis_lucifugus
ENSTNIG00000011595	alyref	98	50.357	ENSMLUG00000030671	-	98	52.158	Myotis_lucifugus
ENSTNIG00000011595	alyref	98	50.178	ENSMLUG00000028605	-	98	50.534	Myotis_lucifugus
ENSTNIG00000011595	alyref	100	53.737	ENSMLUG00000014372	-	100	54.804	Myotis_lucifugus
ENSTNIG00000011595	alyref	98	52.297	ENSMLUG00000022467	-	98	50.179	Myotis_lucifugus
ENSTNIG00000011595	alyref	100	67.769	ENSNGAG00000022014	-	100	69.008	Nannospalax_galili
ENSTNIG00000011595	alyref	100	73.551	ENSNBRG00000001747	alyref	100	76.344	Neolamprologus_brichardi
ENSTNIG00000011595	alyref	100	53.962	ENSNBRG00000017460	-	100	51.439	Neolamprologus_brichardi
ENSTNIG00000011595	alyref	100	69.149	ENSONIG00000019434	alyref	100	74.113	Oreochromis_niloticus
ENSTNIG00000011595	alyref	100	54.511	ENSONIG00000003296	-	100	53.430	Oreochromis_niloticus
ENSTNIG00000011595	alyref	99	39.735	ENSORLG00000001620	-	60	47.368	Oryzias_latipes
ENSTNIG00000011595	alyref	99	50.000	ENSORLG00020015673	-	99	48.507	Oryzias_latipes_hni
ENSTNIG00000011595	alyref	100	72.826	ENSORLG00020011942	alyref	100	76.812	Oryzias_latipes_hni
ENSTNIG00000011595	alyref	100	73.358	ENSORLG00015022664	alyref	100	77.372	Oryzias_latipes_hsok
ENSTNIG00000011595	alyref	99	49.421	ENSORLG00015015143	-	99	46.931	Oryzias_latipes_hsok
ENSTNIG00000011595	alyref	100	75.273	ENSOMEG00000019176	alyref	100	76.364	Oryzias_melastigma
ENSTNIG00000011595	alyref	99	49.804	ENSOMEG00000007158	-	97	46.816	Oryzias_melastigma
ENSTNIG00000011595	alyref	79	72.775	ENSPPAG00000036403	-	68	74.869	Pan_paniscus
ENSTNIG00000011595	alyref	99	69.697	ENSPKIG00000006233	-	80	69.318	Paramormyrops_kingsleyae
ENSTNIG00000011595	alyref	100	63.899	ENSPKIG00000007070	alyref	100	62.718	Paramormyrops_kingsleyae
ENSTNIG00000011595	alyref	99	70.956	ENSPMGG00000016600	alyref	91	69.091	Periophthalmus_magnuspinnatus
ENSTNIG00000011595	alyref	65	55.152	ENSPMGG00000012994	-	97	55.152	Periophthalmus_magnuspinnatus
ENSTNIG00000011595	alyref	100	67.490	ENSPEMG00000016628	-	100	68.675	Peromyscus_maniculatus_bairdii
ENSTNIG00000011595	alyref	100	45.926	ENSPFOG00000017094	-	100	44.981	Poecilia_formosa
ENSTNIG00000011595	alyref	100	71.326	ENSPFOG00000022825	alyref	99	72.760	Poecilia_formosa
ENSTNIG00000011595	alyref	100	45.926	ENSPLAG00000014380	-	100	44.981	Poecilia_latipinna
ENSTNIG00000011595	alyref	100	71.583	ENSPLAG00000006948	alyref	100	73.022	Poecilia_latipinna
ENSTNIG00000011595	alyref	100	45.926	ENSPMEG00000023039	-	100	44.981	Poecilia_mexicana
ENSTNIG00000011595	alyref	100	71.326	ENSPMEG00000003547	alyref	100	72.760	Poecilia_mexicana
ENSTNIG00000011595	alyref	100	71.942	ENSPREG00000015795	alyref	100	73.381	Poecilia_reticulata
ENSTNIG00000011595	alyref	100	48.302	ENSPREG00000003649	-	100	45.255	Poecilia_reticulata
ENSTNIG00000011595	alyref	99	48.175	ENSPNYG00000002879	-	98	48.727	Pundamilia_nyererei
ENSTNIG00000011595	alyref	100	75.182	ENSPNYG00000017498	alyref	100	76.895	Pundamilia_nyererei
ENSTNIG00000011595	alyref	100	65.950	ENSPNAG00000002531	alyref	100	70.357	Pygocentrus_nattereri
ENSTNIG00000011595	alyref	83	71.642	ENSSBOG00000030924	-	87	72.139	Saimiri_boliviensis_boliviensis
ENSTNIG00000011595	alyref	99	50.549	ENSSHAG00000012866	-	99	48.507	Sarcophilus_harrisii
ENSTNIG00000011595	alyref	99	60.744	ENSSHAG00000000609	-	99	55.061	Sarcophilus_harrisii
ENSTNIG00000011595	alyref	88	74.419	ENSSFOG00015003923	alyref	75	76.923	Scleropages_formosus
ENSTNIG00000011595	alyref	79	73.711	ENSSFOG00015003678	alyref	83	73.575	Scleropages_formosus
ENSTNIG00000011595	alyref	100	72.563	ENSSMAG00000009283	alyref	100	73.741	Scophthalmus_maximus
ENSTNIG00000011595	alyref	100	47.842	ENSSMAG00000011169	-	100	56.906	Scophthalmus_maximus
ENSTNIG00000011595	alyref	100	71.898	ENSSDUG00000016158	alyref	100	76.087	Seriola_dumerili
ENSTNIG00000011595	alyref	100	70.438	ENSSLDG00000017803	alyref	100	75.090	Seriola_lalandi_dorsalis
ENSTNIG00000011595	alyref	99	52.549	ENSSPAG00000017028	-	96	48.561	Stegastes_partitus
ENSTNIG00000011595	alyref	100	53.668	ENSTRUG00000003051	-	100	49.466	Takifugu_rubripes
ENSTNIG00000011595	alyref	81	73.846	ENSVVUG00000000272	-	82	75.773	Vulpes_vulpes
ENSTNIG00000011595	alyref	99	73.091	ENSXCOG00000018047	alyref	99	73.741	Xiphophorus_couchianus
ENSTNIG00000011595	alyref	100	46.442	ENSXMAG00000018086	-	100	45.353	Xiphophorus_maculatus
ENSTNIG00000011595	alyref	99	73.091	ENSXMAG00000012218	alyref	99	73.741	Xiphophorus_maculatus