EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000011669 (Gene tree)
Gene ID: -
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2898 bases
Position: chrUn_random:29904749-29907646
Accession: ZDB-GENE-040809-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000014620	RRM_1	PF00076.22	6.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000014820	-	1269	-	ENSTNIP00000014620	422 (aa)	-	H3D282

Gene Model

Click here to download ENSTNIG00000011669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000011669's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000011669	rbm42	100	69.841	ENSAPOG00000015109	rbm42	99	69.091	Acanthochromis_polyacanthus
ENSTNIG00000011669	rbm42	100	65.986	ENSACIG00000010771	rbm42	99	65.682	Amphilophus_citrinellus
ENSTNIG00000011669	rbm42	100	70.522	ENSAOCG00000008873	rbm42	99	69.091	Amphiprion_ocellaris
ENSTNIG00000011669	rbm42	100	70.522	ENSAPEG00000012051	rbm42	98	69.091	Amphiprion_percula
ENSTNIG00000011669	rbm42	100	68.793	ENSATEG00000000536	rbm42	99	70.387	Anabas_testudineus
ENSTNIG00000011669	rbm42	100	68.707	ENSACLG00000004988	rbm42	99	66.364	Astatotilapia_calliptera
ENSTNIG00000011669	rbm42	100	60.088	ENSAMXG00000016545	rbm42	99	58.057	Astyanax_mexicanus
ENSTNIG00000011669	rbm42	98	66.590	ENSCSEG00000010248	rbm42	100	67.898	Cynoglossus_semilaevis
ENSTNIG00000011669	rbm42	100	63.883	ENSCVAG00000015589	rbm42	99	66.140	Cyprinodon_variegatus
ENSTNIG00000011669	rbm42	100	55.702	ENSDARG00000039910	rbm42	99	54.066	Danio_rerio
ENSTNIG00000011669	rbm42	100	58.333	ENSELUG00000022403	rbm42	99	57.837	Esox_lucius
ENSTNIG00000011669	rbm42	63	64.583	ENSFHEG00000006764	rbm42	91	65.172	Fundulus_heteroclitus
ENSTNIG00000011669	rbm42	99	60.455	ENSGMOG00000012660	rbm42	99	57.534	Gadus_morhua
ENSTNIG00000011669	rbm42	74	64.955	ENSGAFG00000009059	rbm42	99	62.918	Gambusia_affinis
ENSTNIG00000011669	rbm42	100	66.440	ENSGACG00000004170	rbm42	98	68.148	Gasterosteus_aculeatus
ENSTNIG00000011669	rbm42	100	68.707	ENSHBUG00000011141	rbm42	99	66.364	Haplochromis_burtoni
ENSTNIG00000011669	rbm42	100	64.045	ENSHCOG00000021214	rbm42	99	63.575	Hippocampus_comes
ENSTNIG00000011669	rbm42	100	60.129	ENSIPUG00000022365	rbm42	99	57.461	Ictalurus_punctatus
ENSTNIG00000011669	rbm42	91	63.433	ENSKMAG00000015287	rbm42	99	64.912	Kryptolebias_marmoratus
ENSTNIG00000011669	rbm42	86	65.116	ENSLBEG00000004578	-	96	66.406	Labrus_bergylta
ENSTNIG00000011669	rbm42	100	66.667	ENSLBEG00000017547	rbm42	99	67.929	Labrus_bergylta
ENSTNIG00000011669	rbm42	100	57.582	ENSLOCG00000003368	rbm42	99	55.629	Lepisosteus_oculatus
ENSTNIG00000011669	rbm42	100	71.136	ENSMAMG00000006708	rbm42	99	69.545	Mastacembelus_armatus
ENSTNIG00000011669	rbm42	100	68.707	ENSMZEG00005025234	rbm42	99	66.364	Maylandia_zebra
ENSTNIG00000011669	rbm42	100	60.227	ENSMALG00000015720	rbm42	100	67.241	Monopterus_albus
ENSTNIG00000011669	rbm42	100	70.068	ENSONIG00000008029	rbm42	99	67.500	Oreochromis_niloticus
ENSTNIG00000011669	rbm42	100	53.653	ENSORLG00020022507	rbm42	99	52.784	Oryzias_latipes_hni
ENSTNIG00000011669	rbm42	100	64.920	ENSORLG00015000659	rbm42	99	66.287	Oryzias_latipes_hsok
ENSTNIG00000011669	rbm42	57	68.548	ENSOMEG00000014332	rbm42	84	64.800	Oryzias_melastigma
ENSTNIG00000011669	rbm42	100	60.403	ENSPKIG00000015165	rbm42	99	60.850	Paramormyrops_kingsleyae
ENSTNIG00000011669	rbm42	75	75.758	ENSPMGG00000003569	rbm42	98	95.714	Periophthalmus_magnuspinnatus
ENSTNIG00000011669	rbm42	100	63.182	ENSPFOG00000007701	rbm42	99	63.265	Poecilia_formosa
ENSTNIG00000011669	rbm42	100	63.182	ENSPLAG00000009405	rbm42	99	63.265	Poecilia_latipinna
ENSTNIG00000011669	rbm42	100	63.182	ENSPMEG00000010375	rbm42	99	64.626	Poecilia_mexicana
ENSTNIG00000011669	rbm42	100	63.182	ENSPREG00000018102	rbm42	99	63.265	Poecilia_reticulata
ENSTNIG00000011669	rbm42	100	68.481	ENSPNYG00000014460	rbm42	99	65.986	Pundamilia_nyererei
ENSTNIG00000011669	rbm42	100	60.181	ENSPNAG00000009961	rbm42	99	58.315	Pygocentrus_nattereri
ENSTNIG00000011669	rbm42	100	58.720	ENSSFOG00015019227	rbm42	99	58.991	Scleropages_formosus
ENSTNIG00000011669	rbm42	100	68.326	ENSSMAG00000011935	rbm42	99	67.347	Scophthalmus_maximus
ENSTNIG00000011669	rbm42	100	67.347	ENSSDUG00000004033	rbm42	99	68.636	Seriola_dumerili
ENSTNIG00000011669	rbm42	100	56.916	ENSSLDG00000009918	rbm42	98	86.585	Seriola_lalandi_dorsalis
ENSTNIG00000011669	rbm42	100	68.707	ENSSPAG00000019871	rbm42	99	68.409	Stegastes_partitus
ENSTNIG00000011669	rbm42	100	75.806	ENSTRUG00000024586	-	76	73.733	Takifugu_rubripes
ENSTNIG00000011669	rbm42	100	52.679	ENSXETG00000017599	rbm42	99	54.084	Xenopus_tropicalis
ENSTNIG00000011669	rbm42	100	62.443	ENSXMAG00000012827	rbm42	99	62.528	Xiphophorus_maculatus