EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000011685 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1056 bases
Position: chr3:12746228-12747283
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000014636	MMR_HSR1	PF01926.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000014836	-	543	-	ENSTNIP00000014636	180 (aa)	-	Q4S991

Gene Model

Click here to download ENSTNIG00000011685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000011685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000011685	-	92	48.193	ENSTNIG00000004344	arl3	91	48.193
ENSTNIG00000011685	-	97	65.714	ENSTNIG00000019582	arf6b	100	65.714
ENSTNIG00000011685	-	93	31.492	ENSTNIG00000008635	sar1ab	90	31.492
ENSTNIG00000011685	-	100	91.160	ENSTNIG00000015063	-	100	91.160
ENSTNIG00000011685	-	70	40.146	ENSTNIG00000005278	arfrp1	97	40.146
ENSTNIG00000011685	-	97	42.308	ENSTNIG00000009430	ARL6	98	42.308
ENSTNIG00000011685	-	97	48.295	ENSTNIG00000005852	arl8	97	48.295
ENSTNIG00000011685	-	99	31.285	ENSTNIG00000014751	arl8ba	96	31.285
ENSTNIG00000011685	-	80	67.586	ENSTNIG00000000796	-	64	67.586
ENSTNIG00000011685	-	71	30.070	ENSTNIG00000004511	-	85	30.070
ENSTNIG00000011685	-	98	44.134	ENSTNIG00000009030	-	98	44.134
ENSTNIG00000011685	-	89	45.963	ENSTNIG00000010605	arl11	88	45.963
ENSTNIG00000011685	-	100	93.923	ENSTNIG00000002029	arf2b	100	93.923
ENSTNIG00000011685	-	80	64.384	ENSTNIG00000018302	-	64	64.384
ENSTNIG00000011685	-	97	83.908	ENSTNIG00000003348	arf5	97	83.908
ENSTNIG00000011685	-	91	42.604	ENSTNIG00000015242	-	88	42.604
ENSTNIG00000011685	-	97	81.609	ENSTNIG00000017954	-	97	81.609
ENSTNIG00000011685	-	90	45.833	ENSTNIG00000000601	arl4aa	84	45.833
ENSTNIG00000011685	-	95	31.977	ENSTNIG00000007336	arl8bb	92	31.977
ENSTNIG00000011685	-	93	45.509	ENSTNIG00000014233	arl3l2	89	45.509
ENSTNIG00000011685	-	96	49.133	ENSTNIG00000013830	arl2	93	49.133
ENSTNIG00000011685	-	98	58.757	ENSTNIG00000006920	arl1	97	58.757
ENSTNIG00000011685	-	98	47.159	ENSTNIG00000003015	arl5c	98	47.159
ENSTNIG00000011685	-	94	30.435	ENSTNIG00000016097	sar1b	91	30.435
ENSTNIG00000011685	-	80	66.897	ENSTNIG00000001632	-	64	65.986
ENSTNIG00000011685	-	100	91.713	ENSTNIG00000014595	arf3b	100	91.713
ENSTNIG00000011685	-	91	40.761	ENSTNIG00000004395	ARL6	88	40.761
ENSTNIG00000011685	-	98	48.023	ENSTNIG00000000814	arl5a	98	48.023
ENSTNIG00000011685	-	62	70.536	ENSTNIG00000005043	-	99	70.536
ENSTNIG00000011685	-	94	44.318	ENSTNIG00000003426	-	88	44.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000011685	-	100	93.333	ENSACIG00000012192	-	100	93.333	Amphilophus_citrinellus
ENSTNIG00000011685	-	84	94.040	ENSAOCG00000001275	-	88	94.040	Amphiprion_ocellaris
ENSTNIG00000011685	-	100	93.889	ENSAPEG00000016909	-	100	93.889	Amphiprion_percula
ENSTNIG00000011685	-	100	94.444	ENSATEG00000003174	-	100	94.444	Anabas_testudineus
ENSTNIG00000011685	-	100	92.222	ENSACLG00000004123	-	100	92.222	Astatotilapia_calliptera
ENSTNIG00000011685	-	100	93.923	ENSAMXG00000019845	arf1	100	93.923	Astyanax_mexicanus
ENSTNIG00000011685	-	100	93.333	ENSCVAG00000013374	-	100	93.333	Cyprinodon_variegatus
ENSTNIG00000011685	-	100	93.923	ENSDARG00000009484	arf1	100	93.923	Danio_rerio
ENSTNIG00000011685	-	100	93.923	ENSELUG00000022533	arf1	79	93.923	Esox_lucius
ENSTNIG00000011685	-	100	92.778	ENSFHEG00000005859	-	100	92.778	Fundulus_heteroclitus
ENSTNIG00000011685	-	96	87.283	ENSGMOG00000000429	arf1	95	87.283	Gadus_morhua
ENSTNIG00000011685	-	100	93.333	ENSGAFG00000018151	-	100	93.333	Gambusia_affinis
ENSTNIG00000011685	-	100	86.667	ENSGACG00000014195	-	97	86.667	Gasterosteus_aculeatus
ENSTNIG00000011685	-	100	92.222	ENSHBUG00000002636	-	100	92.222	Haplochromis_burtoni
ENSTNIG00000011685	-	100	93.370	ENSIPUG00000006311	arf1	100	93.370	Ictalurus_punctatus
ENSTNIG00000011685	-	100	92.778	ENSKMAG00000018315	-	100	92.778	Kryptolebias_marmoratus
ENSTNIG00000011685	-	99	87.640	ENSLBEG00000023263	-	98	87.640	Labrus_bergylta
ENSTNIG00000011685	-	99	87.709	ENSLBEG00000001998	arf1	99	87.709	Labrus_bergylta
ENSTNIG00000011685	-	100	93.889	ENSMAMG00000001553	-	100	93.889	Mastacembelus_armatus
ENSTNIG00000011685	-	100	92.222	ENSMZEG00005022594	-	100	92.222	Maylandia_zebra
ENSTNIG00000011685	-	100	95.000	ENSMALG00000004269	-	100	95.000	Monopterus_albus
ENSTNIG00000011685	-	100	92.222	ENSNBRG00000016455	-	100	92.222	Neolamprologus_brichardi
ENSTNIG00000011685	-	100	92.222	ENSONIG00000001286	-	100	92.222	Oreochromis_niloticus
ENSTNIG00000011685	-	100	94.444	ENSORLG00000023270	-	100	94.444	Oryzias_latipes
ENSTNIG00000011685	-	100	95.000	ENSORLG00020006712	-	100	95.000	Oryzias_latipes_hni
ENSTNIG00000011685	-	100	94.444	ENSORLG00015019836	-	100	94.444	Oryzias_latipes_hsok
ENSTNIG00000011685	-	100	94.444	ENSOMEG00000023784	-	100	94.444	Oryzias_melastigma
ENSTNIG00000011685	-	100	86.667	ENSPMGG00000014174	arf1	98	90.000	Periophthalmus_magnuspinnatus
ENSTNIG00000011685	-	100	92.222	ENSPMAG00000002035	arf1	100	92.222	Petromyzon_marinus
ENSTNIG00000011685	-	100	93.333	ENSPFOG00000014787	-	100	93.333	Poecilia_formosa
ENSTNIG00000011685	-	100	93.333	ENSPLAG00000001041	-	100	93.333	Poecilia_latipinna
ENSTNIG00000011685	-	100	93.333	ENSPMEG00000024077	-	100	93.333	Poecilia_mexicana
ENSTNIG00000011685	-	100	93.333	ENSPREG00000009009	-	100	93.333	Poecilia_reticulata
ENSTNIG00000011685	-	100	92.222	ENSPNYG00000009472	-	100	92.222	Pundamilia_nyererei
ENSTNIG00000011685	-	94	95.858	ENSPNAG00000000098	arf1	93	95.858	Pygocentrus_nattereri
ENSTNIG00000011685	-	99	78.212	YDL192W	-	99	78.212	Saccharomyces_cerevisiae
ENSTNIG00000011685	-	99	77.654	YDL137W	-	99	77.654	Saccharomyces_cerevisiae
ENSTNIG00000011685	-	100	88.333	ENSSMAG00000006125	-	100	88.333	Scophthalmus_maximus
ENSTNIG00000011685	-	100	95.556	ENSSDUG00000017356	-	100	95.556	Seriola_dumerili
ENSTNIG00000011685	-	100	95.556	ENSSLDG00000008504	-	100	95.556	Seriola_lalandi_dorsalis
ENSTNIG00000011685	-	100	94.444	ENSSPAG00000011431	-	100	94.444	Stegastes_partitus
ENSTNIG00000011685	-	100	97.778	ENSTRUG00000019870	-	100	97.778	Takifugu_rubripes
ENSTNIG00000011685	-	100	93.333	ENSXCOG00000016687	-	98	93.333	Xiphophorus_couchianus
ENSTNIG00000011685	-	100	93.333	ENSXMAG00000009193	-	100	93.333	Xiphophorus_maculatus