EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTNIG00000011711 (Gene tree)
Gene ID
-
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Plus strand
Length
1982 bases
Position
chr3:13143692-13145673
Accession
ZDB-GENE-031118-30
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000014662MMR_HSR1PF01926.238.6e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000014862-663-ENSTNIP00000014662221 (aa)-H3D2C4
Gene Model
Click here to download ENSTNIG00000011711's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000011711's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000011711rab5c7741.860ENSTNIG00000018319-8641.860
ENSTNIG00000011711rab5c7942.373ENSTNIG00000016831RAB418342.373
ENSTNIG00000011711rab5c9141.294ENSTNIG00000009039rab149141.294
ENSTNIG00000011711rab5c7140.506ENSTNIG00000001448-9440.506
ENSTNIG00000011711rab5c7333.129ENSTNIG00000012154kras8533.129
ENSTNIG00000011711rab5c6735.135ENSTNIG00000016575rab236836.250
ENSTNIG00000011711rab5c7341.975ENSTNIG00000006650RAB197541.975
ENSTNIG00000011711rab5c6848.667ENSTNIG00000004511-9348.667
ENSTNIG00000011711rab5c7247.170ENSTNIG00000002003-7847.170
ENSTNIG00000011711rab5c7842.697ENSTNIG00000011114-8642.697
ENSTNIG00000011711rab5c8830.244ENSTNIG00000016231rab34a7930.244
ENSTNIG00000011711rab5c9439.904ENSTNIG00000008717rab18a9839.904
ENSTNIG00000011711rab5c7339.394ENSTNIG00000010122rab33a7139.394
ENSTNIG00000011711rab5c7538.122ENSTNIG00000010125rab33ba7538.122
ENSTNIG00000011711rab5c5734.375ENSTNIG00000006917si:cabz01085950.19734.375
ENSTNIG00000011711rab5c9040.201ENSTNIG00000015257rab6bb9540.201
ENSTNIG00000011711rab5c7235.714ENSTNIG00000001195rab9a8135.714
ENSTNIG00000011711rab5c7336.025ENSTNIG00000017951rabl27036.025
ENSTNIG00000011711rab5c7345.029ENSTNIG00000005090rab25a7845.029
ENSTNIG00000011711rab5c9041.791ENSTNIG00000007882rab18b9541.791
ENSTNIG00000011711rab5c8948.980ENSTNIG00000018267rab22a9848.980
ENSTNIG00000011711rab5c5837.984ENSTNIG00000013920rab209730.165
ENSTNIG00000011711rab5c8033.708ENSTNIG00000001043si:ch211-247i17.18733.708
ENSTNIG00000011711rab5c7132.500ENSTNIG00000016158rab34b6232.500
ENSTNIG00000011711rab5c7348.447ENSTNIG00000011081rab11bb7448.447
ENSTNIG00000011711rab5c8835.468ENSTNIG00000014859rab128435.468
ENSTNIG00000011711rab5c7447.368ENSTNIG00000004004-9347.368
ENSTNIG00000011711rab5c8040.984ENSTNIG00000018498-8140.984
ENSTNIG00000011711rab5c7237.500ENSTNIG00000001260RAB157537.500
ENSTNIG00000011711rab5c8139.665ENSTNIG00000003472rab2a9637.561
ENSTNIG00000011711rab5c7443.902ENSTNIG00000017844-8743.902
ENSTNIG00000011711rab5c7736.000ENSTNIG00000001956RAB9A8236.000
ENSTNIG00000011711rab5c6933.117ENSTNIG00000014591rheb8333.117
ENSTNIG00000011711rab5c5430.400ENSTNIG00000019582arf6b6630.400
ENSTNIG00000011711rab5c5830.303ENSTNIG00000014751arl8ba6630.303
ENSTNIG00000011711rab5c5831.061ENSTNIG00000007336arl8bb6631.061
ENSTNIG00000011711rab5c8930.457ENSTNIG00000011385hrasb9530.457
ENSTNIG00000011711rab5c7336.747ENSTNIG00000003679-7736.747
ENSTNIG00000011711rab5c7539.766ENSTNIG00000015000zgc:1015597239.766
ENSTNIG00000011711rab5c7640.719ENSTNIG00000011300si:dkey-16l2.169636.816
ENSTNIG00000011711rab5c7336.646ENSTNIG00000008784-9936.646
ENSTNIG00000011711rab5c7339.130ENSTNIG00000016414rab157639.130
ENSTNIG00000011711rab5c8841.667ENSTNIG00000013184-9441.667
ENSTNIG00000011711rab5c8842.157ENSTNIG00000013182-9442.157
ENSTNIG00000011711rab5c9484.135ENSTNIG00000009196rab5aa9584.135
ENSTNIG00000011711rab5c7833.880ENSTNIG00000012343-7833.880
ENSTNIG00000011711rab5c7842.697ENSTNIG00000014604RAB7A8642.697
ENSTNIG00000011711rab5c7633.728ENSTNIG00000013137ran7733.728
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000011711rab5c9988.182ENSG00000108774RAB5C9496.581Homo_sapiens
ENSTNIG00000011711rab5c9595.735ENSAPOG00000016864rab5c9695.735Acanthochromis_polyacanthus
ENSTNIG00000011711rab5c9590.431ENSAMEG00000006003RAB5C9690.431Ailuropoda_melanoleuca
ENSTNIG00000011711rab5c9597.156ENSACIG00000010896rab5c9896.682Amphilophus_citrinellus
ENSTNIG00000011711rab5c9595.735ENSAOCG00000016614rab5c9695.735Amphiprion_ocellaris
ENSTNIG00000011711rab5c9894.444ENSAPEG00000017868-9994.444Amphiprion_percula
ENSTNIG00000011711rab5c9598.095ENSATEG00000001937rab5c9698.095Anabas_testudineus
ENSTNIG00000011711rab5c9092.424ENSANAG00000025390RAB5C9792.424Aotus_nancymaae
ENSTNIG00000011711rab5c9596.209ENSACLG00000002706rab5c9696.209Astatotilapia_calliptera
ENSTNIG00000011711rab5c9589.100ENSACLG00000008615-9986.878Astatotilapia_calliptera
ENSTNIG00000011711rab5c9492.308ENSAMXG00000037267-9992.308Astyanax_mexicanus
ENSTNIG00000011711rab5c9597.170ENSAMXG00000043717rab5c9697.170Astyanax_mexicanus
ENSTNIG00000011711rab5c9590.431ENSBTAG00000006982RAB5C9690.431Bos_taurus
ENSTNIG00000011711rab5c9676.056WBGene00004268rab-59976.056Caenorhabditis_elegans
ENSTNIG00000011711rab5c9590.431ENSCAFG00000015629RAB5C9690.431Canis_familiaris
ENSTNIG00000011711rab5c9590.431ENSCAFG00020013537RAB5C9690.431Canis_lupus_dingo
ENSTNIG00000011711rab5c9590.431ENSCHIG00000012960RAB5C9690.431Capra_hircus
ENSTNIG00000011711rab5c9590.909ENSTSYG00000030531RAB5C9690.909Carlito_syrichta
ENSTNIG00000011711rab5c9590.431ENSCCAG00000025940RAB5C9690.431Cebus_capucinus
ENSTNIG00000011711rab5c9590.909ENSCATG00000040873RAB5C9690.909Cercocebus_atys
ENSTNIG00000011711rab5c9590.431ENSCLAG00000016650RAB5C9690.431Chinchilla_lanigera
ENSTNIG00000011711rab5c8193.333ENSCHOG00000009886RAB5C9993.333Choloepus_hoffmanni
ENSTNIG00000011711rab5c9578.095ENSCING00000003340-9578.095Ciona_intestinalis
ENSTNIG00000011711rab5c9777.578ENSCSAVG00000000613-9985.714Ciona_savignyi
ENSTNIG00000011711rab5c9590.909ENSCGRG00001014226Rab5c9690.909Cricetulus_griseus_chok1gshd
ENSTNIG00000011711rab5c9590.909ENSCGRG00000007534Rab5c9690.909Cricetulus_griseus_crigri
ENSTNIG00000011711rab5c9594.787ENSCSEG00000017024rab5c9694.787Cynoglossus_semilaevis
ENSTNIG00000011711rab5c9595.261ENSCVAG00000009550rab5c9695.261Cyprinodon_variegatus
ENSTNIG00000011711rab5c9590.431ENSDNOG00000038853RAB5C9690.431Dasypus_novemcinctus
ENSTNIG00000011711rab5c9591.388ENSDORG00000006819Rab5c9691.388Dipodomys_ordii
ENSTNIG00000011711rab5c8679.894FBgn0014010Rab58479.894Drosophila_melanogaster
ENSTNIG00000011711rab5c8584.043ENSEBUG00000014794rab5c8984.043Eptatretus_burgeri
ENSTNIG00000011711rab5c9590.431ENSEASG00005009281RAB5C9690.431Equus_asinus_asinus
ENSTNIG00000011711rab5c9590.909ENSECAG00000025054RAB5C9690.909Equus_caballus
ENSTNIG00000011711rab5c9590.431ENSEEUG00000002790RAB5C9690.431Erinaceus_europaeus
ENSTNIG00000011711rab5c9594.737ENSELUG00000018516rab5c9694.737Esox_lucius
ENSTNIG00000011711rab5c9591.469ENSELUG00000010439-9691.469Esox_lucius
ENSTNIG00000011711rab5c9590.431ENSFCAG00000002148RAB5C9690.431Felis_catus
ENSTNIG00000011711rab5c9589.474ENSFDAG00000021541RAB5C9689.474Fukomys_damarensis
ENSTNIG00000011711rab5c9596.682ENSFHEG00000012117rab5c9696.682Fundulus_heteroclitus
ENSTNIG00000011711rab5c9888.479ENSFHEG00000015268-9988.479Fundulus_heteroclitus
ENSTNIG00000011711rab5c7689.286ENSGMOG00000001876-9789.286Gadus_morhua
ENSTNIG00000011711rab5c9595.261ENSGMOG00000015096rab5c9695.261Gadus_morhua
ENSTNIG00000011711rab5c9489.855ENSGAFG00000003642-9987.727Gambusia_affinis
ENSTNIG00000011711rab5c9596.682ENSGAFG00000000884rab5c9696.682Gambusia_affinis
ENSTNIG00000011711rab5c9592.381ENSGACG00000008659rab5c9592.381Gasterosteus_aculeatus
ENSTNIG00000011711rab5c9590.909ENSGGOG00000005472RAB5C9690.909Gorilla_gorilla
ENSTNIG00000011711rab5c9596.209ENSHBUG00000002014rab5c9696.209Haplochromis_burtoni
ENSTNIG00000011711rab5c9589.100ENSHBUG00000006823-9986.878Haplochromis_burtoni
ENSTNIG00000011711rab5c9589.474ENSHGLG00000012067RAB5C9689.474Heterocephalus_glaber_female
ENSTNIG00000011711rab5c9582.381ENSHCOG00000020238-9581.429Hippocampus_comes
ENSTNIG00000011711rab5c9596.698ENSHCOG00000004662rab5c9596.698Hippocampus_comes
ENSTNIG00000011711rab5c9595.755ENSIPUG00000020082rab5c9794.686Ictalurus_punctatus
ENSTNIG00000011711rab5c9589.952ENSSTOG00000006620RAB5C9689.952Ictidomys_tridecemlineatus
ENSTNIG00000011711rab5c9590.909ENSJJAG00000021181Rab5c9690.909Jaculus_jaculus
ENSTNIG00000011711rab5c9888.940ENSKMAG00000017417-9988.940Kryptolebias_marmoratus
ENSTNIG00000011711rab5c9597.156ENSKMAG00000020038rab5c9697.156Kryptolebias_marmoratus
ENSTNIG00000011711rab5c9889.401ENSLBEG00000010408-9989.401Labrus_bergylta
ENSTNIG00000011711rab5c9597.630ENSLBEG00000004128rab5c9697.630Labrus_bergylta
ENSTNIG00000011711rab5c9592.344ENSLOCG00000012566rab5c9792.344Lepisosteus_oculatus
ENSTNIG00000011711rab5c9590.909ENSMFAG00000039627RAB5C9690.909Macaca_fascicularis
ENSTNIG00000011711rab5c9590.909ENSMNEG00000000355RAB5C9690.909Macaca_nemestrina
ENSTNIG00000011711rab5c9889.862ENSMAMG00000016207-9989.862Mastacembelus_armatus
ENSTNIG00000011711rab5c9598.104ENSMAMG00000022322rab5c9698.104Mastacembelus_armatus
ENSTNIG00000011711rab5c9589.100ENSMZEG00005021090-9986.878Maylandia_zebra
ENSTNIG00000011711rab5c9596.209ENSMZEG00005022735rab5c9696.209Maylandia_zebra
ENSTNIG00000011711rab5c9590.909ENSMAUG00000015005Rab5c9690.909Mesocricetus_auratus
ENSTNIG00000011711rab5c9590.909ENSMICG00000041608RAB5C9690.909Microcebus_murinus
ENSTNIG00000011711rab5c9590.909ENSMOCG00000018531-9690.909Microtus_ochrogaster
ENSTNIG00000011711rab5c9597.143ENSMMOG00000020621rab5c9597.143Mola_mola
ENSTNIG00000011711rab5c9887.558ENSMALG00000022348-9987.558Monopterus_albus
ENSTNIG00000011711rab5c9591.469ENSMALG00000006052rab5c9989.189Monopterus_albus
ENSTNIG00000011711rab5c9590.909MGP_CAROLIEiJ_G0017184Rab5c9690.909Mus_caroli
ENSTNIG00000011711rab5c9590.909ENSMUSG00000019173Rab5c9690.909Mus_musculus
ENSTNIG00000011711rab5c9590.909MGP_PahariEiJ_G0018314Rab5c9690.909Mus_pahari
ENSTNIG00000011711rab5c9590.909MGP_SPRETEiJ_G0018027Rab5c9690.909Mus_spretus
ENSTNIG00000011711rab5c9590.431ENSMPUG00000010554RAB5C9690.431Mustela_putorius_furo
ENSTNIG00000011711rab5c9590.431ENSNGAG00000010286Rab5c9690.431Nannospalax_galili
ENSTNIG00000011711rab5c9597.156ENSNBRG00000018165rab5c9697.156Neolamprologus_brichardi
ENSTNIG00000011711rab5c9589.100ENSNBRG00000016922-9986.878Neolamprologus_brichardi
ENSTNIG00000011711rab5c7788.304ENSOPRG00000008255RAB5C9688.304Ochotona_princeps
ENSTNIG00000011711rab5c9589.952ENSODEG00000017920RAB5C9689.952Octodon_degus
ENSTNIG00000011711rab5c9596.682ENSONIG00000001113rab5c9696.682Oreochromis_niloticus
ENSTNIG00000011711rab5c9596.667ENSORLG00000003882rab5c9696.667Oryzias_latipes
ENSTNIG00000011711rab5c9596.190ENSORLG00020008388rab5c9696.190Oryzias_latipes_hni
ENSTNIG00000011711rab5c9596.667ENSORLG00015021900rab5c9696.667Oryzias_latipes_hsok
ENSTNIG00000011711rab5c9596.667ENSOMEG00000023078rab5c9696.667Oryzias_melastigma
ENSTNIG00000011711rab5c9590.909ENSOGAG00000009456RAB5C9690.909Otolemur_garnettii
ENSTNIG00000011711rab5c9590.431ENSOARG00000018768RAB5C9690.431Ovis_aries
ENSTNIG00000011711rab5c9590.909ENSPPAG00000037206RAB5C9690.909Pan_paniscus
ENSTNIG00000011711rab5c9590.431ENSPPRG00000005745RAB5C9690.431Panthera_pardus
ENSTNIG00000011711rab5c9590.431ENSPTIG00000008177RAB5C9690.431Panthera_tigris_altaica
ENSTNIG00000011711rab5c9590.909ENSPTRG00000009194RAB5C9690.909Pan_troglodytes
ENSTNIG00000011711rab5c9588.517ENSPKIG00000020112-9688.517Paramormyrops_kingsleyae
ENSTNIG00000011711rab5c9588.517ENSPKIG00000001237-9688.517Paramormyrops_kingsleyae
ENSTNIG00000011711rab5c9594.762ENSPMGG00000010792rab5c9794.762Periophthalmus_magnuspinnatus
ENSTNIG00000011711rab5c9590.909ENSPEMG00000017971Rab5c9690.909Peromyscus_maniculatus_bairdii
ENSTNIG00000011711rab5c9576.555ENSPMAG00000001399rab5c9676.555Petromyzon_marinus
ENSTNIG00000011711rab5c9578.605ENSPMAG00000000008rab5c9778.605Petromyzon_marinus
ENSTNIG00000011711rab5c8482.888ENSPMAG00000007867rab5c8982.888Petromyzon_marinus
ENSTNIG00000011711rab5c9989.908ENSPCIG00000020225-9989.908Phascolarctos_cinereus
ENSTNIG00000011711rab5c9888.018ENSPLAG00000016333-9988.018Poecilia_latipinna
ENSTNIG00000011711rab5c9596.682ENSPLAG00000004790rab5c9696.682Poecilia_latipinna
ENSTNIG00000011711rab5c9596.682ENSPMEG00000011336rab5c9696.682Poecilia_mexicana
ENSTNIG00000011711rab5c9589.100ENSPMEG00000012614-9888.128Poecilia_mexicana
ENSTNIG00000011711rab5c8589.840ENSPREG00000022167-8694.643Poecilia_reticulata
ENSTNIG00000011711rab5c9596.682ENSPREG00000010146rab5c9696.682Poecilia_reticulata
ENSTNIG00000011711rab5c9590.909ENSPPYG00000008398RAB5C9690.909Pongo_abelii
ENSTNIG00000011711rab5c9589.474ENSPCAG00000016412RAB5C9689.474Procavia_capensis
ENSTNIG00000011711rab5c9589.952ENSPCOG00000026327RAB5C9689.952Propithecus_coquereli
ENSTNIG00000011711rab5c9590.909ENSPVAG00000003867RAB5C9690.909Pteropus_vampyrus
ENSTNIG00000011711rab5c9596.209ENSPNYG00000010615rab5c9696.209Pundamilia_nyererei
ENSTNIG00000011711rab5c9589.100ENSPNYG00000015851-9986.878Pundamilia_nyererei
ENSTNIG00000011711rab5c9589.952ENSPNAG00000002218-9889.952Pygocentrus_nattereri
ENSTNIG00000011711rab5c9596.698ENSPNAG00000028138rab5c9696.698Pygocentrus_nattereri
ENSTNIG00000011711rab5c9590.909ENSRNOG00000018568Rab5c9690.909Rattus_norvegicus
ENSTNIG00000011711rab5c9590.909ENSRBIG00000031376RAB5C9690.909Rhinopithecus_bieti
ENSTNIG00000011711rab5c9590.909ENSRROG00000032895RAB5C9690.909Rhinopithecus_roxellana
ENSTNIG00000011711rab5c9590.431ENSSBOG00000032552-9690.431Saimiri_boliviensis_boliviensis
ENSTNIG00000011711rab5c9591.866ENSSHAG00000005267-9691.866Sarcophilus_harrisii
ENSTNIG00000011711rab5c9588.038ENSSFOG00015009988-9588.038Scleropages_formosus
ENSTNIG00000011711rab5c9596.209ENSSMAG00000007323rab5c9696.209Scophthalmus_maximus
ENSTNIG00000011711rab5c9596.682ENSSDUG00000023008rab5c9696.682Seriola_dumerili
ENSTNIG00000011711rab5c9595.735ENSSLDG00000017771rab5c9695.735Seriola_lalandi_dorsalis
ENSTNIG00000011711rab5c9590.431ENSSPUG00000012950-9690.431Sphenodon_punctatus
ENSTNIG00000011711rab5c9598.104ENSSPAG00000006436rab5c9698.104Stegastes_partitus
ENSTNIG00000011711rab5c9590.431ENSSSCG00000032467RAB5C9690.431Sus_scrofa
ENSTNIG00000011711rab5c9597.619ENSTRUG00000015590rab5c9597.619Takifugu_rubripes
ENSTNIG00000011711rab5c9591.388ENSTBEG00000007092RAB5C9691.388Tupaia_belangeri
ENSTNIG00000011711rab5c9590.431ENSTTRG00000006673RAB5C9690.431Tursiops_truncatus
ENSTNIG00000011711rab5c9590.431ENSUAMG00000024343RAB5C9690.431Ursus_americanus
ENSTNIG00000011711rab5c9590.431ENSUMAG00000023270RAB5C9690.431Ursus_maritimus
ENSTNIG00000011711rab5c9795.833ENSXCOG00000016788rab5c9996.226Xiphophorus_couchianus
ENSTNIG00000011711rab5c9489.372ENSXCOG00000006300-9987.273Xiphophorus_couchianus
ENSTNIG00000011711rab5c9887.558ENSXMAG00000022179-9987.558Xiphophorus_maculatus
ENSTNIG00000011711rab5c9596.682ENSXMAG00000003266rab5c9696.682Xiphophorus_maculatus

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