EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000011828 (Gene tree)
Gene ID: -
Gene Symbol: zc3h12b
Alias: si:dkey-286f3.6
Full Name: zinc finger CCCH-type containing 12B
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2931 bases
Position: chr7:6484536-6487466
Accession: ZDB-GENE-060526-290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000014782	RNase_Zc3h12a	PF11977.8	4.7e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000014983	-	2310	-	ENSTNIP00000014782	769 (aa)	-	H3D2P4

Gene Model

Click here to download ENSTNIG00000011828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000011828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000011828	zc3h12b	85	46.981	ENSTNIG00000014519	-	99	47.485

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000011828	zc3h12b	99	63.702	ENSG00000102053	ZC3H12B	92	66.325	Homo_sapiens
ENSTNIG00000011828	zc3h12b	100	91.557	ENSAPOG00000001738	zc3h12b	92	91.557	Acanthochromis_polyacanthus
ENSTNIG00000011828	zc3h12b	83	71.205	ENSAMEG00000006955	ZC3H12B	99	71.094	Ailuropoda_melanoleuca
ENSTNIG00000011828	zc3h12b	100	91.849	ENSACIG00000009787	zc3h12b	92	91.849	Amphilophus_citrinellus
ENSTNIG00000011828	zc3h12b	100	91.703	ENSAOCG00000010094	zc3h12b	92	91.703	Amphiprion_ocellaris
ENSTNIG00000011828	zc3h12b	100	91.557	ENSAPEG00000007479	zc3h12b	92	91.557	Amphiprion_percula
ENSTNIG00000011828	zc3h12b	100	91.703	ENSATEG00000011175	zc3h12b	92	91.703	Anabas_testudineus
ENSTNIG00000011828	zc3h12b	93	75.556	ENSACAG00000013582	ZC3H12B	85	75.556	Anolis_carolinensis
ENSTNIG00000011828	zc3h12b	99	63.582	ENSANAG00000010296	ZC3H12B	92	66.325	Aotus_nancymaae
ENSTNIG00000011828	zc3h12b	100	91.412	ENSACLG00000007669	zc3h12b	91	91.412	Astatotilapia_calliptera
ENSTNIG00000011828	zc3h12b	80	54.818	ENSAMXG00000005320	-	91	45.568	Astyanax_mexicanus
ENSTNIG00000011828	zc3h12b	94	76.157	ENSAMXG00000011328	zc3h12b	74	76.157	Astyanax_mexicanus
ENSTNIG00000011828	zc3h12b	84	44.042	ENSAMXG00000038308	-	72	44.659	Astyanax_mexicanus
ENSTNIG00000011828	zc3h12b	99	64.084	ENSBTAG00000002206	ZC3H12B	93	65.267	Bos_taurus
ENSTNIG00000011828	zc3h12b	99	63.429	ENSCJAG00000001427	ZC3H12B	92	66.197	Callithrix_jacchus
ENSTNIG00000011828	zc3h12b	99	61.990	ENSCAFG00000031307	ZC3H12B	93	64.368	Canis_familiaris
ENSTNIG00000011828	zc3h12b	99	61.990	ENSCAFG00020017995	ZC3H12B	93	64.368	Canis_lupus_dingo
ENSTNIG00000011828	zc3h12b	77	70.302	ENSCHIG00000011723	ZC3H12B	98	70.302	Capra_hircus
ENSTNIG00000011828	zc3h12b	99	64.183	ENSTSYG00000011302	ZC3H12B	93	66.411	Carlito_syrichta
ENSTNIG00000011828	zc3h12b	80	66.019	ENSCAPG00000000650	ZC3H12B	100	66.019	Cavia_aperea
ENSTNIG00000011828	zc3h12b	99	63.582	ENSCCAG00000030171	ZC3H12B	92	66.325	Cebus_capucinus
ENSTNIG00000011828	zc3h12b	99	63.822	ENSCATG00000044845	ZC3H12B	92	66.453	Cercocebus_atys
ENSTNIG00000011828	zc3h12b	99	63.614	ENSCLAG00000003600	ZC3H12B	93	65.900	Chinchilla_lanigera
ENSTNIG00000011828	zc3h12b	95	76.436	ENSCPBG00000006983	ZC3H12B	84	76.471	Chrysemys_picta_bellii
ENSTNIG00000011828	zc3h12b	99	63.702	ENSCANG00000006746	ZC3H12B	92	66.325	Colobus_angolensis_palliatus
ENSTNIG00000011828	zc3h12b	99	63.373	ENSCGRG00001018643	Zc3h12b	92	66.067	Cricetulus_griseus_chok1gshd
ENSTNIG00000011828	zc3h12b	99	63.373	ENSCGRG00000015623	Zc3h12b	92	66.067	Cricetulus_griseus_crigri
ENSTNIG00000011828	zc3h12b	94	88.987	ENSCSEG00000013686	zc3h12b	86	88.987	Cynoglossus_semilaevis
ENSTNIG00000011828	zc3h12b	89	91.412	ENSCVAG00000010473	zc3h12b	80	91.412	Cyprinodon_variegatus
ENSTNIG00000011828	zc3h12b	93	77.922	ENSDARG00000062463	zc3h12b	87	77.922	Danio_rerio
ENSTNIG00000011828	zc3h12b	97	61.875	ENSDNOG00000038439	ZC3H12B	93	62.468	Dasypus_novemcinctus
ENSTNIG00000011828	zc3h12b	99	64.311	ENSDORG00000024832	Zc3h12b	92	67.137	Dipodomys_ordii
ENSTNIG00000011828	zc3h12b	96	62.111	ENSETEG00000012095	ZC3H12B	92	62.861	Echinops_telfairi
ENSTNIG00000011828	zc3h12b	99	59.976	ENSEASG00005006995	ZC3H12B	92	62.069	Equus_asinus_asinus
ENSTNIG00000011828	zc3h12b	99	63.986	ENSECAG00000020993	ZC3H12B	93	66.327	Equus_caballus
ENSTNIG00000011828	zc3h12b	99	85.798	ENSELUG00000010689	zc3h12b	79	84.627	Esox_lucius
ENSTNIG00000011828	zc3h12b	100	62.425	ENSFCAG00000032299	ZC3H12B	93	64.834	Felis_catus
ENSTNIG00000011828	zc3h12b	99	63.253	ENSFDAG00000014258	ZC3H12B	93	65.685	Fukomys_damarensis
ENSTNIG00000011828	zc3h12b	89	89.898	ENSFHEG00000002391	zc3h12b	79	89.898	Fundulus_heteroclitus
ENSTNIG00000011828	zc3h12b	50	88.095	ENSFHEG00000014717	-	59	85.520	Fundulus_heteroclitus
ENSTNIG00000011828	zc3h12b	59	78.571	ENSGMOG00000001804	zc3h12b	74	78.571	Gadus_morhua
ENSTNIG00000011828	zc3h12b	94	69.260	ENSGALG00000039391	ZC3H12B	93	69.133	Gallus_gallus
ENSTNIG00000011828	zc3h12b	94	90.247	ENSGAFG00000006871	zc3h12b	91	90.247	Gambusia_affinis
ENSTNIG00000011828	zc3h12b	95	87.705	ENSGACG00000020334	zc3h12b	95	87.551	Gasterosteus_aculeatus
ENSTNIG00000011828	zc3h12b	93	76.583	ENSGAGG00000005569	ZC3H12B	84	76.583	Gopherus_agassizii
ENSTNIG00000011828	zc3h12b	99	63.702	ENSGGOG00000024638	ZC3H12B	92	66.325	Gorilla_gorilla
ENSTNIG00000011828	zc3h12b	100	91.266	ENSHBUG00000000645	zc3h12b	91	91.266	Haplochromis_burtoni
ENSTNIG00000011828	zc3h12b	99	63.373	ENSHGLG00000003107	ZC3H12B	93	65.645	Heterocephalus_glaber_female
ENSTNIG00000011828	zc3h12b	99	63.373	ENSHGLG00100010721	ZC3H12B	93	65.645	Heterocephalus_glaber_male
ENSTNIG00000011828	zc3h12b	100	89.374	ENSHCOG00000008487	zc3h12b	88	89.374	Hippocampus_comes
ENSTNIG00000011828	zc3h12b	84	48.780	ENSIPUG00000014830	-	74	48.726	Ictalurus_punctatus
ENSTNIG00000011828	zc3h12b	93	77.056	ENSIPUG00000016745	zc3h12b	75	76.136	Ictalurus_punctatus
ENSTNIG00000011828	zc3h12b	98	65.356	ENSSTOG00000020962	ZC3H12B	93	66.922	Ictidomys_tridecemlineatus
ENSTNIG00000011828	zc3h12b	96	64.277	ENSJJAG00000015755	Zc3h12b	93	64.676	Jaculus_jaculus
ENSTNIG00000011828	zc3h12b	100	90.975	ENSKMAG00000004921	zc3h12b	92	90.975	Kryptolebias_marmoratus
ENSTNIG00000011828	zc3h12b	100	91.134	ENSLBEG00000006448	zc3h12b	91	91.134	Labrus_bergylta
ENSTNIG00000011828	zc3h12b	94	75.735	ENSLACG00000014526	ZC3H12B	85	75.735	Latimeria_chalumnae
ENSTNIG00000011828	zc3h12b	99	81.296	ENSLOCG00000014631	zc3h12b	79	81.296	Lepisosteus_oculatus
ENSTNIG00000011828	zc3h12b	86	54.148	ENSLOCG00000010717	-	76	53.835	Lepisosteus_oculatus
ENSTNIG00000011828	zc3h12b	98	63.736	ENSLAFG00000014891	ZC3H12B	93	65.311	Loxodonta_africana
ENSTNIG00000011828	zc3h12b	99	63.582	ENSMFAG00000042237	ZC3H12B	92	66.197	Macaca_fascicularis
ENSTNIG00000011828	zc3h12b	99	63.702	ENSMMUG00000012261	ZC3H12B	92	66.325	Macaca_mulatta
ENSTNIG00000011828	zc3h12b	99	63.702	ENSMNEG00000043003	ZC3H12B	92	66.325	Macaca_nemestrina
ENSTNIG00000011828	zc3h12b	99	63.822	ENSMLEG00000042630	ZC3H12B	92	66.453	Mandrillus_leucophaeus
ENSTNIG00000011828	zc3h12b	100	91.121	ENSMAMG00000011770	zc3h12b	91	91.121	Mastacembelus_armatus
ENSTNIG00000011828	zc3h12b	100	91.412	ENSMZEG00005007548	zc3h12b	91	91.412	Maylandia_zebra
ENSTNIG00000011828	zc3h12b	94	69.949	ENSMGAG00000000759	ZC3H12B	92	69.949	Meleagris_gallopavo
ENSTNIG00000011828	zc3h12b	97	64.691	ENSMAUG00000017800	Zc3h12b	92	66.195	Mesocricetus_auratus
ENSTNIG00000011828	zc3h12b	98	65.683	ENSMICG00000010697	ZC3H12B	93	66.794	Microcebus_murinus
ENSTNIG00000011828	zc3h12b	99	63.614	ENSMOCG00000000094	Zc3h12b	93	65.565	Microtus_ochrogaster
ENSTNIG00000011828	zc3h12b	99	92.274	ENSMMOG00000008734	zc3h12b	92	92.274	Mola_mola
ENSTNIG00000011828	zc3h12b	96	72.206	ENSMODG00000005206	ZC3H12B	86	72.206	Monodelphis_domestica
ENSTNIG00000011828	zc3h12b	100	78.606	ENSMALG00000021153	zc3h12b	95	80.886	Monopterus_albus
ENSTNIG00000011828	zc3h12b	97	64.198	ENSMUSG00000035045	Zc3h12b	92	66.195	Mus_musculus
ENSTNIG00000011828	zc3h12b	94	66.195	MGP_PahariEiJ_G0031787	Zc3h12b	92	66.195	Mus_pahari
ENSTNIG00000011828	zc3h12b	97	64.198	MGP_SPRETEiJ_G0034413	Zc3h12b	92	66.195	Mus_spretus
ENSTNIG00000011828	zc3h12b	98	62.545	ENSMPUG00000001162	ZC3H12B	92	65.167	Mustela_putorius_furo
ENSTNIG00000011828	zc3h12b	98	65.019	ENSMLUG00000013635	ZC3H12B	94	66.838	Myotis_lucifugus
ENSTNIG00000011828	zc3h12b	100	91.557	ENSNBRG00000014889	zc3h12b	91	91.557	Neolamprologus_brichardi
ENSTNIG00000011828	zc3h12b	99	63.822	ENSNLEG00000000383	ZC3H12B	92	66.325	Nomascus_leucogenys
ENSTNIG00000011828	zc3h12b	97	69.496	ENSMEUG00000014075	ZC3H12B	93	71.053	Notamacropus_eugenii
ENSTNIG00000011828	zc3h12b	100	91.703	ENSONIG00000012867	zc3h12b	92	91.703	Oreochromis_niloticus
ENSTNIG00000011828	zc3h12b	79	56.885	ENSOANG00000008267	-	100	56.885	Ornithorhynchus_anatinus
ENSTNIG00000011828	zc3h12b	99	67.816	ENSOCUG00000006130	ZC3H12B	93	70.822	Oryctolagus_cuniculus
ENSTNIG00000011828	zc3h12b	100	90.102	ENSORLG00000009556	zc3h12b	99	81.159	Oryzias_latipes
ENSTNIG00000011828	zc3h12b	55	84.279	ENSORLG00020019033	-	51	88.276	Oryzias_latipes_hni
ENSTNIG00000011828	zc3h12b	89	90.102	ENSORLG00020021793	zc3h12b	81	90.102	Oryzias_latipes_hni
ENSTNIG00000011828	zc3h12b	89	90.247	ENSORLG00015004818	zc3h12b	81	90.247	Oryzias_latipes_hsok
ENSTNIG00000011828	zc3h12b	55	84.279	ENSORLG00015020619	-	60	84.279	Oryzias_latipes_hsok
ENSTNIG00000011828	zc3h12b	100	90.539	ENSOMEG00000005768	zc3h12b	92	90.539	Oryzias_melastigma
ENSTNIG00000011828	zc3h12b	99	63.822	ENSOGAG00000029439	ZC3H12B	93	65.903	Otolemur_garnettii
ENSTNIG00000011828	zc3h12b	99	63.415	ENSOARG00000004959	ZC3H12B	93	65.517	Ovis_aries
ENSTNIG00000011828	zc3h12b	99	63.702	ENSPPAG00000039530	ZC3H12B	92	66.325	Pan_paniscus
ENSTNIG00000011828	zc3h12b	84	70.652	ENSPPRG00000004966	-	95	70.652	Panthera_pardus
ENSTNIG00000011828	zc3h12b	83	71.160	ENSPTIG00000005571	ZC3H12B	99	71.049	Panthera_tigris_altaica
ENSTNIG00000011828	zc3h12b	99	63.702	ENSPTRG00000021969	ZC3H12B	92	66.325	Pan_troglodytes
ENSTNIG00000011828	zc3h12b	99	63.822	ENSPANG00000007944	ZC3H12B	92	66.453	Papio_anubis
ENSTNIG00000011828	zc3h12b	61	75.646	ENSPKIG00000012595	-	53	75.646	Paramormyrops_kingsleyae
ENSTNIG00000011828	zc3h12b	99	80.527	ENSPKIG00000019893	ZC3H12B	87	79.083	Paramormyrops_kingsleyae
ENSTNIG00000011828	zc3h12b	93	75.704	ENSPKIG00000012946	zc3h12b	85	75.704	Paramormyrops_kingsleyae
ENSTNIG00000011828	zc3h12b	88	76.730	ENSPSIG00000016853	ZC3H12B	80	76.730	Pelodiscus_sinensis
ENSTNIG00000011828	zc3h12b	100	79.207	ENSPMGG00000006009	zc3h12b	99	78.726	Periophthalmus_magnuspinnatus
ENSTNIG00000011828	zc3h12b	97	71.659	ENSPCIG00000020264	ZC3H12B	85	71.659	Phascolarctos_cinereus
ENSTNIG00000011828	zc3h12b	99	90.393	ENSPFOG00000019365	zc3h12b	91	90.393	Poecilia_formosa
ENSTNIG00000011828	zc3h12b	95	90.684	ENSPLAG00000011981	zc3h12b	90	86.608	Poecilia_latipinna
ENSTNIG00000011828	zc3h12b	99	86.608	ENSPMEG00000002552	zc3h12b	90	86.608	Poecilia_mexicana
ENSTNIG00000011828	zc3h12b	99	90.393	ENSPREG00000020794	zc3h12b	91	90.393	Poecilia_reticulata
ENSTNIG00000011828	zc3h12b	99	66.752	ENSPPYG00000020416	ZC3H12B	93	69.780	Pongo_abelii
ENSTNIG00000011828	zc3h12b	99	64.231	ENSPCAG00000016422	ZC3H12B	93	66.757	Procavia_capensis
ENSTNIG00000011828	zc3h12b	98	65.479	ENSPCOG00000020467	ZC3H12B	93	66.794	Propithecus_coquereli
ENSTNIG00000011828	zc3h12b	98	61.669	ENSPVAG00000017352	ZC3H12B	93	63.165	Pteropus_vampyrus
ENSTNIG00000011828	zc3h12b	100	91.266	ENSPNYG00000018012	zc3h12b	91	91.266	Pundamilia_nyererei
ENSTNIG00000011828	zc3h12b	94	77.433	ENSPNAG00000002567	zc3h12b	93	72.070	Pygocentrus_nattereri
ENSTNIG00000011828	zc3h12b	84	49.924	ENSPNAG00000017483	-	74	49.481	Pygocentrus_nattereri
ENSTNIG00000011828	zc3h12b	99	64.112	ENSRNOG00000011508	Zc3h12b	92	66.324	Rattus_norvegicus
ENSTNIG00000011828	zc3h12b	99	63.822	ENSRBIG00000036402	ZC3H12B	92	66.453	Rhinopithecus_bieti
ENSTNIG00000011828	zc3h12b	99	63.702	ENSRROG00000036004	ZC3H12B	92	66.325	Rhinopithecus_roxellana
ENSTNIG00000011828	zc3h12b	99	63.582	ENSSBOG00000004095	ZC3H12B	92	66.325	Saimiri_boliviensis_boliviensis
ENSTNIG00000011828	zc3h12b	96	72.581	ENSSHAG00000006530	ZC3H12B	80	72.581	Sarcophilus_harrisii
ENSTNIG00000011828	zc3h12b	99	79.676	ENSSFOG00015012866	ZC3H12B	90	77.682	Scleropages_formosus
ENSTNIG00000011828	zc3h12b	93	81.805	ENSSFOG00015008769	zc3h12b	85	81.805	Scleropages_formosus
ENSTNIG00000011828	zc3h12b	100	90.552	ENSSMAG00000018309	zc3h12b	92	90.552	Scophthalmus_maximus
ENSTNIG00000011828	zc3h12b	100	91.924	ENSSDUG00000014078	zc3h12b	92	91.924	Seriola_dumerili
ENSTNIG00000011828	zc3h12b	100	91.777	ENSSLDG00000018895	zc3h12b	91	91.777	Seriola_lalandi_dorsalis
ENSTNIG00000011828	zc3h12b	99	54.356	ENSSARG00000002292	ZC3H12B	92	56.492	Sorex_araneus
ENSTNIG00000011828	zc3h12b	93	67.543	ENSSPUG00000014175	ZC3H12B	96	67.674	Sphenodon_punctatus
ENSTNIG00000011828	zc3h12b	100	91.994	ENSSPAG00000022460	zc3h12b	92	91.994	Stegastes_partitus
ENSTNIG00000011828	zc3h12b	97	65.504	ENSSSCG00000012367	ZC3H12B	93	66.411	Sus_scrofa
ENSTNIG00000011828	zc3h12b	94	68.948	ENSTGUG00000002846	ZC3H12B	94	68.821	Taeniopygia_guttata
ENSTNIG00000011828	zc3h12b	96	94.461	ENSTRUG00000012186	zc3h12b	91	94.461	Takifugu_rubripes
ENSTNIG00000011828	zc3h12b	92	65.690	ENSTBEG00000011540	ZC3H12B	93	67.686	Tupaia_belangeri
ENSTNIG00000011828	zc3h12b	88	67.899	ENSTTRG00000007468	ZC3H12B	84	67.899	Tursiops_truncatus
ENSTNIG00000011828	zc3h12b	99	61.779	ENSUAMG00000005098	ZC3H12B	93	64.240	Ursus_americanus
ENSTNIG00000011828	zc3h12b	99	61.779	ENSUMAG00000017054	ZC3H12B	93	64.240	Ursus_maritimus
ENSTNIG00000011828	zc3h12b	99	64.103	ENSVPAG00000009070	ZC3H12B	94	66.485	Vicugna_pacos
ENSTNIG00000011828	zc3h12b	99	63.177	ENSVVUG00000022686	ZC3H12B	93	64.496	Vulpes_vulpes
ENSTNIG00000011828	zc3h12b	96	70.088	ENSXETG00000017794	zc3h12b	83	91.304	Xenopus_tropicalis
ENSTNIG00000011828	zc3h12b	100	90.393	ENSXCOG00000006151	zc3h12b	91	90.393	Xiphophorus_couchianus
ENSTNIG00000011828	zc3h12b	100	90.393	ENSXMAG00000018548	zc3h12b	91	90.393	Xiphophorus_maculatus