EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000012085 (Gene tree)
Gene ID: -
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 15710 bases
Position: chr18:5873531-5889240
Accession: ZDB-GENE-030131-4076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002708	Suf	PF05843.14	2.7e-08	1	1
ENSTNIP00000015049	Suf	PF05843.14	2.9e-08	1	1
ENSTNIP00000002708	S1	PF00575.23	6.6e-62	1	4
ENSTNIP00000002708	S1	PF00575.23	6.6e-62	2	4
ENSTNIP00000002708	S1	PF00575.23	6.6e-62	3	4
ENSTNIP00000002708	S1	PF00575.23	6.6e-62	4	4
ENSTNIP00000015049	S1	PF00575.23	8.9e-61	1	3
ENSTNIP00000015049	S1	PF00575.23	8.9e-61	2	3
ENSTNIP00000015049	S1	PF00575.23	8.9e-61	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003793	-	5529	-	ENSTNIP00000002708	1842 (aa)	-	H3C389
ENSTNIT00000015251	-	5577	-	ENSTNIP00000015049	1858 (aa)	-	H3D3G1

Gene Model

Click here to download ENSTNIG00000012085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000012085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000012085	pdcd11	99	44.063	ENSG00000148843	PDCD11	99	43.958	Homo_sapiens
ENSTNIG00000012085	pdcd11	99	71.758	ENSAPOG00000015629	pdcd11	99	71.758	Acanthochromis_polyacanthus
ENSTNIG00000012085	pdcd11	99	43.799	ENSAMEG00000017935	PDCD11	99	43.859	Ailuropoda_melanoleuca
ENSTNIG00000012085	pdcd11	75	65.795	ENSACIG00000006458	-	98	65.795	Amphilophus_citrinellus
ENSTNIG00000012085	pdcd11	99	72.011	ENSAOCG00000015287	pdcd11	99	71.949	Amphiprion_ocellaris
ENSTNIG00000012085	pdcd11	78	73.183	ENSAPEG00000020240	pdcd11	100	69.668	Amphiprion_percula
ENSTNIG00000012085	pdcd11	100	72.469	ENSATEG00000021043	pdcd11	100	72.309	Anabas_testudineus
ENSTNIG00000012085	pdcd11	99	43.939	ENSAPLG00000010301	PDCD11	99	43.939	Anas_platyrhynchos
ENSTNIG00000012085	pdcd11	99	44.409	ENSACAG00000004796	PDCD11	99	44.190	Anolis_carolinensis
ENSTNIG00000012085	pdcd11	99	43.332	ENSANAG00000034576	PDCD11	99	43.485	Aotus_nancymaae
ENSTNIG00000012085	pdcd11	94	79.023	ENSACLG00000018236	pdcd11	100	79.023	Astatotilapia_calliptera
ENSTNIG00000012085	pdcd11	99	47.427	ENSAMXG00000005458	pdcd11	98	50.679	Astyanax_mexicanus
ENSTNIG00000012085	pdcd11	99	43.865	ENSBTAG00000009715	PDCD11	99	44.076	Bos_taurus
ENSTNIG00000012085	pdcd11	99	43.588	ENSCJAG00000018257	PDCD11	99	43.743	Callithrix_jacchus
ENSTNIG00000012085	pdcd11	99	43.528	ENSCAFG00000010411	PDCD11	99	43.886	Canis_familiaris
ENSTNIG00000012085	pdcd11	99	44.315	ENSCAFG00020010369	PDCD11	99	44.125	Canis_lupus_dingo
ENSTNIG00000012085	pdcd11	99	43.842	ENSCHIG00000025218	PDCD11	99	43.895	Capra_hircus
ENSTNIG00000012085	pdcd11	96	43.439	ENSTSYG00000033423	PDCD11	99	42.834	Carlito_syrichta
ENSTNIG00000012085	pdcd11	94	38.767	ENSCAPG00000005386	PDCD11	99	38.809	Cavia_aperea
ENSTNIG00000012085	pdcd11	99	42.653	ENSCPOG00000010957	PDCD11	99	43.337	Cavia_porcellus
ENSTNIG00000012085	pdcd11	99	43.455	ENSCCAG00000018950	PDCD11	99	43.561	Cebus_capucinus
ENSTNIG00000012085	pdcd11	99	43.852	ENSCATG00000044331	PDCD11	99	43.852	Cercocebus_atys
ENSTNIG00000012085	pdcd11	99	42.531	ENSCLAG00000001029	PDCD11	99	42.667	Chinchilla_lanigera
ENSTNIG00000012085	pdcd11	99	43.793	ENSCSAG00000005346	PDCD11	99	43.793	Chlorocebus_sabaeus
ENSTNIG00000012085	pdcd11	77	71.318	ENSCHOG00000004796	PDCD11	76	71.318	Choloepus_hoffmanni
ENSTNIG00000012085	pdcd11	90	63.636	ENSCPBG00000024487	PDCD11	99	63.636	Chrysemys_picta_bellii
ENSTNIG00000012085	pdcd11	99	43.618	ENSCANG00000043300	PDCD11	99	43.799	Colobus_angolensis_palliatus
ENSTNIG00000012085	pdcd11	99	42.525	ENSCGRG00001006458	Pdcd11	99	42.600	Cricetulus_griseus_chok1gshd
ENSTNIG00000012085	pdcd11	99	42.525	ENSCGRG00000003583	Pdcd11	99	42.600	Cricetulus_griseus_crigri
ENSTNIG00000012085	pdcd11	97	67.857	ENSCSEG00000010739	pdcd11	99	68.132	Cynoglossus_semilaevis
ENSTNIG00000012085	pdcd11	95	67.344	ENSCVAG00000018903	pdcd11	99	67.442	Cyprinodon_variegatus
ENSTNIG00000012085	pdcd11	99	51.256	ENSDARG00000052480	pdcd11	99	51.256	Danio_rerio
ENSTNIG00000012085	pdcd11	99	43.799	ENSDNOG00000013838	PDCD11	99	43.823	Dasypus_novemcinctus
ENSTNIG00000012085	pdcd11	99	43.253	ENSDORG00000010420	Pdcd11	99	43.757	Dipodomys_ordii
ENSTNIG00000012085	pdcd11	68	32.682	FBgn0039182	CG5728	91	32.945	Drosophila_melanogaster
ENSTNIG00000012085	pdcd11	93	39.416	ENSETEG00000000813	PDCD11	99	39.201	Echinops_telfairi
ENSTNIG00000012085	pdcd11	72	48.366	ENSEBUG00000002358	-	89	50.000	Eptatretus_burgeri
ENSTNIG00000012085	pdcd11	95	44.444	ENSEASG00005015159	PDCD11	99	44.870	Equus_asinus_asinus
ENSTNIG00000012085	pdcd11	99	44.738	ENSECAG00000020507	PDCD11	99	44.685	Equus_caballus
ENSTNIG00000012085	pdcd11	89	44.018	ENSEEUG00000009245	PDCD11	91	44.136	Erinaceus_europaeus
ENSTNIG00000012085	pdcd11	99	57.937	ENSELUG00000004211	pdcd11	99	57.775	Esox_lucius
ENSTNIG00000012085	pdcd11	99	44.119	ENSFCAG00000002384	PDCD11	99	44.345	Felis_catus
ENSTNIG00000012085	pdcd11	99	44.522	ENSFALG00000008775	PDCD11	99	44.575	Ficedula_albicollis
ENSTNIG00000012085	pdcd11	99	42.812	ENSFDAG00000009532	PDCD11	99	42.789	Fukomys_damarensis
ENSTNIG00000012085	pdcd11	89	84.818	ENSFHEG00000022997	pdcd11	95	84.818	Fundulus_heteroclitus
ENSTNIG00000012085	pdcd11	93	58.076	ENSGMOG00000004186	pdcd11	92	69.271	Gadus_morhua
ENSTNIG00000012085	pdcd11	76	41.672	ENSGALG00000008265	PDCD11	99	41.536	Gallus_gallus
ENSTNIG00000012085	pdcd11	99	68.841	ENSGAFG00000012806	pdcd11	99	68.659	Gambusia_affinis
ENSTNIG00000012085	pdcd11	99	67.970	ENSGACG00000018233	pdcd11	97	81.890	Gasterosteus_aculeatus
ENSTNIG00000012085	pdcd11	96	46.555	ENSGAGG00000024314	PDCD11	99	46.611	Gopherus_agassizii
ENSTNIG00000012085	pdcd11	99	43.875	ENSGGOG00000011621	PDCD11	99	43.747	Gorilla_gorilla
ENSTNIG00000012085	pdcd11	100	70.295	ENSHBUG00000020226	pdcd11	100	70.241	Haplochromis_burtoni
ENSTNIG00000012085	pdcd11	99	42.804	ENSHGLG00000001462	PDCD11	99	42.804	Heterocephalus_glaber_female
ENSTNIG00000012085	pdcd11	99	42.222	ENSHGLG00100018779	PDCD11	99	42.222	Heterocephalus_glaber_male
ENSTNIG00000012085	pdcd11	99	65.329	ENSHCOG00000016006	pdcd11	99	65.206	Hippocampus_comes
ENSTNIG00000012085	pdcd11	76	52.778	ENSIPUG00000015102	pdcd11	99	52.778	Ictalurus_punctatus
ENSTNIG00000012085	pdcd11	99	43.367	ENSSTOG00000014553	PDCD11	99	43.793	Ictidomys_tridecemlineatus
ENSTNIG00000012085	pdcd11	99	43.733	ENSJJAG00000015523	Pdcd11	99	44.124	Jaculus_jaculus
ENSTNIG00000012085	pdcd11	50	66.522	ENSKMAG00000021182	pdcd11	99	66.522	Kryptolebias_marmoratus
ENSTNIG00000012085	pdcd11	99	52.486	ENSLOCG00000011818	pdcd11	99	52.353	Lepisosteus_oculatus
ENSTNIG00000012085	pdcd11	99	43.710	ENSLAFG00000008398	PDCD11	99	43.520	Loxodonta_africana
ENSTNIG00000012085	pdcd11	99	43.625	ENSMFAG00000044058	PDCD11	99	43.852	Macaca_fascicularis
ENSTNIG00000012085	pdcd11	99	43.625	ENSMMUG00000007058	PDCD11	99	43.852	Macaca_mulatta
ENSTNIG00000012085	pdcd11	99	43.776	ENSMNEG00000040726	PDCD11	99	43.776	Macaca_nemestrina
ENSTNIG00000012085	pdcd11	99	43.820	ENSMLEG00000040978	PDCD11	99	43.906	Mandrillus_leucophaeus
ENSTNIG00000012085	pdcd11	99	72.133	ENSMAMG00000009572	pdcd11	99	72.133	Mastacembelus_armatus
ENSTNIG00000012085	pdcd11	100	70.188	ENSMZEG00005008949	pdcd11	100	70.134	Maylandia_zebra
ENSTNIG00000012085	pdcd11	99	44.015	ENSMGAG00000010482	PDCD11	99	44.808	Meleagris_gallopavo
ENSTNIG00000012085	pdcd11	98	46.361	ENSMAUG00000014924	Pdcd11	99	46.458	Mesocricetus_auratus
ENSTNIG00000012085	pdcd11	99	44.232	ENSMICG00000012421	PDCD11	99	44.279	Microcebus_murinus
ENSTNIG00000012085	pdcd11	99	42.925	ENSMOCG00000021792	Pdcd11	99	42.955	Microtus_ochrogaster
ENSTNIG00000012085	pdcd11	99	61.064	ENSMMOG00000007572	pdcd11	97	71.148	Mola_mola
ENSTNIG00000012085	pdcd11	99	41.983	ENSMODG00000011077	PDCD11	99	42.164	Monodelphis_domestica
ENSTNIG00000012085	pdcd11	99	59.594	ENSMALG00000003859	pdcd11	99	70.390	Monopterus_albus
ENSTNIG00000012085	pdcd11	99	43.305	MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.388	Mus_caroli
ENSTNIG00000012085	pdcd11	99	43.214	ENSMUSG00000025047	Pdcd11	99	43.298	Mus_musculus
ENSTNIG00000012085	pdcd11	99	43.107	MGP_PahariEiJ_G0014540	Pdcd11	99	43.243	Mus_pahari
ENSTNIG00000012085	pdcd11	99	43.245	MGP_SPRETEiJ_G0023971	Pdcd11	99	43.328	Mus_spretus
ENSTNIG00000012085	pdcd11	99	44.150	ENSMPUG00000016829	PDCD11	99	44.362	Mustela_putorius_furo
ENSTNIG00000012085	pdcd11	99	43.263	ENSMLUG00000004997	PDCD11	99	43.497	Myotis_lucifugus
ENSTNIG00000012085	pdcd11	99	43.083	ENSNGAG00000018143	Pdcd11	99	43.446	Nannospalax_galili
ENSTNIG00000012085	pdcd11	84	79.430	ENSNBRG00000021596	pdcd11	97	74.212	Neolamprologus_brichardi
ENSTNIG00000012085	pdcd11	99	42.577	ENSNLEG00000026700	PDCD11	99	42.630	Nomascus_leucogenys
ENSTNIG00000012085	pdcd11	69	68.000	ENSMEUG00000013719	-	69	68.000	Notamacropus_eugenii
ENSTNIG00000012085	pdcd11	99	43.046	ENSOPRG00000010593	PDCD11	99	42.940	Ochotona_princeps
ENSTNIG00000012085	pdcd11	99	42.993	ENSODEG00000008079	PDCD11	99	43.023	Octodon_degus
ENSTNIG00000012085	pdcd11	100	70.349	ENSONIG00000018835	pdcd11	100	70.295	Oreochromis_niloticus
ENSTNIG00000012085	pdcd11	99	42.236	ENSOANG00000001636	-	99	42.183	Ornithorhynchus_anatinus
ENSTNIG00000012085	pdcd11	99	43.823	ENSOCUG00000006312	PDCD11	99	43.793	Oryctolagus_cuniculus
ENSTNIG00000012085	pdcd11	75	67.684	ENSORLG00000012995	pdcd11	96	67.684	Oryzias_latipes
ENSTNIG00000012085	pdcd11	99	67.006	ENSORLG00020003642	pdcd11	99	67.006	Oryzias_latipes_hni
ENSTNIG00000012085	pdcd11	99	66.952	ENSORLG00015001618	pdcd11	99	66.899	Oryzias_latipes_hsok
ENSTNIG00000012085	pdcd11	62	69.444	ENSOMEG00000010947	-	98	70.016	Oryzias_melastigma
ENSTNIG00000012085	pdcd11	66	66.694	ENSOMEG00000010904	pdcd11	98	66.612	Oryzias_melastigma
ENSTNIG00000012085	pdcd11	99	43.437	ENSOGAG00000008683	PDCD11	99	43.542	Otolemur_garnettii
ENSTNIG00000012085	pdcd11	99	43.684	ENSOARG00000003719	PDCD11	99	43.684	Ovis_aries
ENSTNIG00000012085	pdcd11	99	43.212	ENSPPAG00000024593	PDCD11	99	43.212	Pan_paniscus
ENSTNIG00000012085	pdcd11	99	44.119	ENSPPRG00000015133	PDCD11	99	44.292	Panthera_pardus
ENSTNIG00000012085	pdcd11	99	44.119	ENSPTIG00000011433	PDCD11	99	44.292	Panthera_tigris_altaica
ENSTNIG00000012085	pdcd11	99	44.034	ENSPTRG00000002911	PDCD11	99	44.034	Pan_troglodytes
ENSTNIG00000012085	pdcd11	99	43.958	ENSPANG00000020959	PDCD11	99	43.882	Papio_anubis
ENSTNIG00000012085	pdcd11	99	52.523	ENSPKIG00000000973	pdcd11	99	52.455	Paramormyrops_kingsleyae
ENSTNIG00000012085	pdcd11	78	42.877	ENSPSIG00000005102	PDCD11	96	42.770	Pelodiscus_sinensis
ENSTNIG00000012085	pdcd11	87	62.397	ENSPMGG00000007289	pdcd11	99	85.714	Periophthalmus_magnuspinnatus
ENSTNIG00000012085	pdcd11	99	42.354	ENSPEMG00000010315	Pdcd11	99	42.669	Peromyscus_maniculatus_bairdii
ENSTNIG00000012085	pdcd11	99	39.708	ENSPMAG00000003098	pdcd11	99	40.126	Petromyzon_marinus
ENSTNIG00000012085	pdcd11	99	43.760	ENSPCIG00000001118	PDCD11	99	43.849	Phascolarctos_cinereus
ENSTNIG00000012085	pdcd11	99	66.166	ENSPFOG00000006012	pdcd11	99	66.396	Poecilia_formosa
ENSTNIG00000012085	pdcd11	95	68.612	ENSPLAG00000014494	pdcd11	95	68.612	Poecilia_latipinna
ENSTNIG00000012085	pdcd11	98	65.364	ENSPMEG00000018177	pdcd11	98	65.066	Poecilia_mexicana
ENSTNIG00000012085	pdcd11	99	65.580	ENSPREG00000000475	pdcd11	99	65.894	Poecilia_reticulata
ENSTNIG00000012085	pdcd11	99	38.599	ENSPPYG00000002621	PDCD11	99	38.567	Pongo_abelii
ENSTNIG00000012085	pdcd11	64	51.810	ENSPCAG00000011663	PDCD11	65	51.901	Procavia_capensis
ENSTNIG00000012085	pdcd11	92	46.928	ENSPCOG00000023327	PDCD11	99	46.623	Propithecus_coquereli
ENSTNIG00000012085	pdcd11	99	43.499	ENSPVAG00000004176	PDCD11	99	43.674	Pteropus_vampyrus
ENSTNIG00000012085	pdcd11	100	70.188	ENSPNYG00000003979	pdcd11	100	70.134	Pundamilia_nyererei
ENSTNIG00000012085	pdcd11	95	54.870	ENSPNAG00000017225	pdcd11	99	55.266	Pygocentrus_nattereri
ENSTNIG00000012085	pdcd11	99	43.122	ENSRNOG00000020304	Pdcd11	99	43.075	Rattus_norvegicus
ENSTNIG00000012085	pdcd11	99	43.671	ENSRBIG00000011889	PDCD11	99	43.852	Rhinopithecus_bieti
ENSTNIG00000012085	pdcd11	99	43.671	ENSRROG00000030483	PDCD11	99	43.852	Rhinopithecus_roxellana
ENSTNIG00000012085	pdcd11	83	46.269	YMR229C	-	88	39.894	Saccharomyces_cerevisiae
ENSTNIG00000012085	pdcd11	99	40.806	ENSSBOG00000030308	PDCD11	99	40.964	Saimiri_boliviensis_boliviensis
ENSTNIG00000012085	pdcd11	99	42.633	ENSSHAG00000018258	PDCD11	99	42.894	Sarcophilus_harrisii
ENSTNIG00000012085	pdcd11	99	53.967	ENSSFOG00015003881	pdcd11	99	53.825	Scleropages_formosus
ENSTNIG00000012085	pdcd11	99	71.781	ENSSMAG00000006612	pdcd11	99	71.781	Scophthalmus_maximus
ENSTNIG00000012085	pdcd11	98	66.000	ENSSDUG00000021302	pdcd11	99	70.710	Seriola_dumerili
ENSTNIG00000012085	pdcd11	70	75.139	ENSSLDG00000010228	pdcd11	98	75.139	Seriola_lalandi_dorsalis
ENSTNIG00000012085	pdcd11	77	61.538	ENSSARG00000002540	PDCD11	69	61.538	Sorex_araneus
ENSTNIG00000012085	pdcd11	97	70.718	ENSSPAG00000017558	pdcd11	100	70.718	Stegastes_partitus
ENSTNIG00000012085	pdcd11	99	43.981	ENSSSCG00000010599	PDCD11	99	44.297	Sus_scrofa
ENSTNIG00000012085	pdcd11	70	80.353	ENSTRUG00000014291	pdcd11	100	80.353	Takifugu_rubripes
ENSTNIG00000012085	pdcd11	95	61.765	ENSTBEG00000001893	PDCD11	95	61.243	Tupaia_belangeri
ENSTNIG00000012085	pdcd11	99	41.521	ENSTTRG00000003356	PDCD11	99	41.565	Tursiops_truncatus
ENSTNIG00000012085	pdcd11	99	43.797	ENSUAMG00000018015	PDCD11	99	43.971	Ursus_americanus
ENSTNIG00000012085	pdcd11	99	43.008	ENSUMAG00000023567	PDCD11	99	43.379	Ursus_maritimus
ENSTNIG00000012085	pdcd11	71	49.451	ENSVPAG00000007405	PDCD11	78	49.451	Vicugna_pacos
ENSTNIG00000012085	pdcd11	99	43.635	ENSVVUG00000004457	PDCD11	99	44.044	Vulpes_vulpes
ENSTNIG00000012085	pdcd11	99	43.835	ENSXETG00000009482	pdcd11	99	44.281	Xenopus_tropicalis
ENSTNIG00000012085	pdcd11	99	55.752	ENSXCOG00000012420	pdcd11	99	55.704	Xiphophorus_couchianus
ENSTNIG00000012085	pdcd11	99	66.327	ENSXMAG00000004638	pdcd11	99	66.613	Xiphophorus_maculatus