EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000012124 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2582 bases
Position: chr13:4934109-4936690
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000015087	RNA_pol_Rpb2_1	PF04563.15	9.7e-31	1	1
ENSTNIP00000015087	RNA_pol_Rpb2_2	PF04561.14	1.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000015291	-	804	-	ENSTNIP00000015087	268 (aa)	-	H3D3J9

Gene Model

Click here to download ENSTNIG00000012124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000012124's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000012124	-	99	92.537	ENSG00000013503	POLR3B	75	91.270	Homo_sapiens
ENSTNIG00000012124	-	99	36.301	ENSDARG00000098783	polr2b	70	33.077	Danio_rerio
ENSTNIG00000012124	-	88	33.077	ENSGAFG00000016504	POLR2B	70	33.077	Gambusia_affinis
ENSTNIG00000012124	-	88	33.077	ENSLBEG00000010055	-	70	33.077	Labrus_bergylta
ENSTNIG00000012124	-	88	33.077	ENSLBEG00000016719	POLR2B	70	33.077	Labrus_bergylta
ENSTNIG00000012124	-	53	93.617	ENSMGAG00000012873	-	59	93.617	Meleagris_gallopavo
ENSTNIG00000012124	-	99	92.537	ENSMUSG00000034453	Polr3b	97	91.954	Mus_musculus
ENSTNIG00000012124	-	53	86.525	ENSPMAG00000002089	-	56	86.525	Petromyzon_marinus
ENSTNIG00000012124	-	56	36.047	ENSSPUG00000018434	-	51	36.047	Sphenodon_punctatus
ENSTNIG00000012124	-	99	91.144	ENSSPUG00000004872	-	87	91.144	Sphenodon_punctatus
ENSTNIG00000012124	-	100	98.134	ENSSPAG00000008931	polr3b	67	98.134	Stegastes_partitus
ENSTNIG00000012124	-	88	33.077	ENSXCOG00000014657	POLR2B	70	33.077	Xiphophorus_couchianus