EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000012228 (Gene tree)
Gene ID: -
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4564 bases
Position: chr14:2730783-2735346
Accession: ZDB-GENE-040718-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000015194	Beta-Casp	PF10996.8	3.4e-20	1	1
ENSTNIP00000015194	Lactamase_B	PF00753.27	2.6e-05	1	1
ENSTNIP00000015194	RMMBL	PF07521.12	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000015398	-	2370	-	ENSTNIP00000015194	789 (aa)	-	H3D3V6

Gene Model

Click here to download ENSTNIG00000012228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000012228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000012228	cpsf2	100	84.450	ENSG00000165934	CPSF2	100	87.500	Homo_sapiens
ENSTNIG00000012228	cpsf2	100	93.790	ENSAPOG00000001242	cpsf2	100	92.776	Acanthochromis_polyacanthus
ENSTNIG00000012228	cpsf2	100	93.038	ENSACIG00000009331	cpsf2	100	93.038	Amphilophus_citrinellus
ENSTNIG00000012228	cpsf2	100	94.043	ENSAOCG00000014095	cpsf2	100	93.029	Amphiprion_ocellaris
ENSTNIG00000012228	cpsf2	100	94.043	ENSAPEG00000009158	cpsf2	100	93.029	Amphiprion_percula
ENSTNIG00000012228	cpsf2	96	93.421	ENSATEG00000017644	cpsf2	99	91.639	Anabas_testudineus
ENSTNIG00000012228	cpsf2	100	84.217	ENSAPLG00000006330	CPSF2	100	83.460	Anas_platyrhynchos
ENSTNIG00000012228	cpsf2	100	83.692	ENSACAG00000009245	CPSF2	100	82.933	Anolis_carolinensis
ENSTNIG00000012228	cpsf2	100	84.197	ENSANAG00000022915	CPSF2	100	83.439	Aotus_nancymaae
ENSTNIG00000012228	cpsf2	100	88.369	ENSAMXG00000018696	cpsf2	100	87.358	Astyanax_mexicanus
ENSTNIG00000012228	cpsf2	100	84.324	ENSBTAG00000010227	CPSF2	100	83.565	Bos_taurus
ENSTNIG00000012228	cpsf2	100	41.706	WBGene00017313	cpsf-2	100	41.901	Caenorhabditis_elegans
ENSTNIG00000012228	cpsf2	100	84.197	ENSCJAG00000018069	CPSF2	100	83.439	Callithrix_jacchus
ENSTNIG00000012228	cpsf2	100	84.324	ENSCAFG00000010909	CPSF2	100	83.565	Canis_familiaris
ENSTNIG00000012228	cpsf2	100	84.324	ENSCAFG00020020670	CPSF2	100	83.565	Canis_lupus_dingo
ENSTNIG00000012228	cpsf2	100	84.324	ENSCHIG00000023848	CPSF2	100	83.565	Capra_hircus
ENSTNIG00000012228	cpsf2	100	83.818	ENSTSYG00000009036	CPSF2	100	83.059	Carlito_syrichta
ENSTNIG00000012228	cpsf2	100	84.324	ENSCPOG00000010899	CPSF2	100	83.565	Cavia_porcellus
ENSTNIG00000012228	cpsf2	100	84.197	ENSCCAG00000028088	CPSF2	100	83.439	Cebus_capucinus
ENSTNIG00000012228	cpsf2	100	84.324	ENSCATG00000030132	CPSF2	100	83.565	Cercocebus_atys
ENSTNIG00000012228	cpsf2	100	84.324	ENSCLAG00000012404	CPSF2	100	83.565	Chinchilla_lanigera
ENSTNIG00000012228	cpsf2	100	84.324	ENSCSAG00000011300	CPSF2	100	83.565	Chlorocebus_sabaeus
ENSTNIG00000012228	cpsf2	100	78.761	ENSCHOG00000012904	CPSF2	100	78.003	Choloepus_hoffmanni
ENSTNIG00000012228	cpsf2	100	84.450	ENSCPBG00000008766	CPSF2	97	83.692	Chrysemys_picta_bellii
ENSTNIG00000012228	cpsf2	100	53.474	ENSCING00000007881	-	100	52.956	Ciona_intestinalis
ENSTNIG00000012228	cpsf2	94	84.232	ENSCANG00000041651	CPSF2	100	83.401	Colobus_angolensis_palliatus
ENSTNIG00000012228	cpsf2	100	83.818	ENSCGRG00001006901	Cpsf2	100	83.059	Cricetulus_griseus_chok1gshd
ENSTNIG00000012228	cpsf2	100	83.818	ENSCGRG00000012416	Cpsf2	100	83.059	Cricetulus_griseus_crigri
ENSTNIG00000012228	cpsf2	100	91.899	ENSCSEG00000004116	cpsf2	100	91.139	Cynoglossus_semilaevis
ENSTNIG00000012228	cpsf2	100	92.015	ENSCVAG00000000095	cpsf2	100	91.128	Cyprinodon_variegatus
ENSTNIG00000012228	cpsf2	100	87.879	ENSDARG00000028971	cpsf2	100	86.995	Danio_rerio
ENSTNIG00000012228	cpsf2	100	84.324	ENSDNOG00000042757	CPSF2	100	83.565	Dasypus_novemcinctus
ENSTNIG00000012228	cpsf2	100	84.071	ENSDORG00000013709	Cpsf2	100	83.312	Dipodomys_ordii
ENSTNIG00000012228	cpsf2	100	54.017	FBgn0027873	Cpsf100	100	54.141	Drosophila_melanogaster
ENSTNIG00000012228	cpsf2	100	76.894	ENSETEG00000012123	CPSF2	100	76.136	Echinops_telfairi
ENSTNIG00000012228	cpsf2	52	76.156	ENSEBUG00000012098	cpsf2	93	74.209	Eptatretus_burgeri
ENSTNIG00000012228	cpsf2	89	90.102	ENSEASG00005021193	CPSF2	100	90.102	Equus_asinus_asinus
ENSTNIG00000012228	cpsf2	100	84.197	ENSECAG00000023935	CPSF2	100	83.439	Equus_caballus
ENSTNIG00000012228	cpsf2	100	87.970	ENSELUG00000008442	cpsf2	100	87.970	Esox_lucius
ENSTNIG00000012228	cpsf2	100	84.197	ENSFCAG00000007886	CPSF2	100	83.439	Felis_catus
ENSTNIG00000012228	cpsf2	100	84.304	ENSFALG00000002412	CPSF2	100	83.544	Ficedula_albicollis
ENSTNIG00000012228	cpsf2	100	84.197	ENSFDAG00000006327	CPSF2	100	83.439	Fukomys_damarensis
ENSTNIG00000012228	cpsf2	98	88.946	ENSFHEG00000015465	cpsf2	99	88.689	Fundulus_heteroclitus
ENSTNIG00000012228	cpsf2	100	88.161	ENSGMOG00000008761	cpsf2	100	87.154	Gadus_morhua
ENSTNIG00000012228	cpsf2	100	84.810	ENSGALG00000010783	CPSF2	100	84.684	Gallus_gallus
ENSTNIG00000012228	cpsf2	100	92.522	ENSGAFG00000001407	cpsf2	100	91.508	Gambusia_affinis
ENSTNIG00000012228	cpsf2	100	93.283	ENSGACG00000008418	cpsf2	100	92.395	Gasterosteus_aculeatus
ENSTNIG00000012228	cpsf2	100	84.324	ENSGAGG00000008287	CPSF2	100	83.565	Gopherus_agassizii
ENSTNIG00000012228	cpsf2	100	84.450	ENSGGOG00000011799	CPSF2	100	83.692	Gorilla_gorilla
ENSTNIG00000012228	cpsf2	100	92.015	ENSHBUG00000023466	cpsf2	100	91.001	Haplochromis_burtoni
ENSTNIG00000012228	cpsf2	100	84.324	ENSHGLG00000018311	CPSF2	100	83.565	Heterocephalus_glaber_female
ENSTNIG00000012228	cpsf2	100	84.324	ENSHGLG00100016460	CPSF2	100	83.565	Heterocephalus_glaber_male
ENSTNIG00000012228	cpsf2	100	91.635	ENSHCOG00000019527	cpsf2	98	90.748	Hippocampus_comes
ENSTNIG00000012228	cpsf2	100	89.254	ENSIPUG00000020857	cpsf2	100	88.243	Ictalurus_punctatus
ENSTNIG00000012228	cpsf2	100	84.197	ENSSTOG00000009528	CPSF2	100	83.439	Ictidomys_tridecemlineatus
ENSTNIG00000012228	cpsf2	100	84.071	ENSJJAG00000017925	Cpsf2	100	83.312	Jaculus_jaculus
ENSTNIG00000012228	cpsf2	100	92.269	ENSKMAG00000019429	cpsf2	100	91.255	Kryptolebias_marmoratus
ENSTNIG00000012228	cpsf2	95	92.513	ENSLBEG00000011585	cpsf2	100	91.444	Labrus_bergylta
ENSTNIG00000012228	cpsf2	100	82.911	ENSLACG00000019024	CPSF2	100	82.427	Latimeria_chalumnae
ENSTNIG00000012228	cpsf2	100	88.005	ENSLOCG00000014102	cpsf2	100	87.121	Lepisosteus_oculatus
ENSTNIG00000012228	cpsf2	100	84.237	ENSLAFG00000004891	CPSF2	100	83.480	Loxodonta_africana
ENSTNIG00000012228	cpsf2	100	84.324	ENSMFAG00000041212	CPSF2	100	83.565	Macaca_fascicularis
ENSTNIG00000012228	cpsf2	100	84.324	ENSMMUG00000000699	CPSF2	100	83.565	Macaca_mulatta
ENSTNIG00000012228	cpsf2	100	84.324	ENSMNEG00000031584	CPSF2	100	83.565	Macaca_nemestrina
ENSTNIG00000012228	cpsf2	100	84.324	ENSMLEG00000029394	CPSF2	100	83.565	Mandrillus_leucophaeus
ENSTNIG00000012228	cpsf2	100	93.663	ENSMAMG00000004235	cpsf2	100	92.649	Mastacembelus_armatus
ENSTNIG00000012228	cpsf2	100	92.142	ENSMZEG00005001769	cpsf2	100	91.128	Maylandia_zebra
ENSTNIG00000012228	cpsf2	100	84.576	ENSMGAG00000013122	CPSF2	100	84.450	Meleagris_gallopavo
ENSTNIG00000012228	cpsf2	100	83.944	ENSMAUG00000015160	Cpsf2	100	83.186	Mesocricetus_auratus
ENSTNIG00000012228	cpsf2	100	84.324	ENSMICG00000016441	CPSF2	100	83.565	Microcebus_murinus
ENSTNIG00000012228	cpsf2	100	83.818	ENSMOCG00000015372	Cpsf2	100	83.059	Microtus_ochrogaster
ENSTNIG00000012228	cpsf2	100	89.480	ENSMMOG00000015590	cpsf2	100	88.720	Mola_mola
ENSTNIG00000012228	cpsf2	100	84.324	ENSMODG00000002042	CPSF2	100	83.565	Monodelphis_domestica
ENSTNIG00000012228	cpsf2	100	89.354	ENSMALG00000022275	cpsf2	100	88.340	Monopterus_albus
ENSTNIG00000012228	cpsf2	100	83.818	ENSMUSG00000041781	Cpsf2	100	83.059	Mus_musculus
ENSTNIG00000012228	cpsf2	100	83.944	MGP_PahariEiJ_G0029791	Cpsf2	100	83.186	Mus_pahari
ENSTNIG00000012228	cpsf2	100	83.818	MGP_SPRETEiJ_G0018877	Cpsf2	100	83.059	Mus_spretus
ENSTNIG00000012228	cpsf2	100	84.324	ENSMPUG00000007617	CPSF2	98	83.565	Mustela_putorius_furo
ENSTNIG00000012228	cpsf2	100	84.324	ENSMLUG00000005570	CPSF2	100	83.565	Myotis_lucifugus
ENSTNIG00000012228	cpsf2	100	84.071	ENSNGAG00000020312	Cpsf2	100	83.312	Nannospalax_galili
ENSTNIG00000012228	cpsf2	100	92.522	ENSNBRG00000022402	cpsf2	100	91.508	Neolamprologus_brichardi
ENSTNIG00000012228	cpsf2	100	83.692	ENSNLEG00000017132	CPSF2	100	82.933	Nomascus_leucogenys
ENSTNIG00000012228	cpsf2	91	92.880	ENSMEUG00000008138	CPSF2	91	92.880	Notamacropus_eugenii
ENSTNIG00000012228	cpsf2	94	80.405	ENSOPRG00000008484	-	100	80.405	Ochotona_princeps
ENSTNIG00000012228	cpsf2	100	84.071	ENSODEG00000008682	CPSF2	100	83.312	Octodon_degus
ENSTNIG00000012228	cpsf2	100	92.649	ENSONIG00000005901	cpsf2	100	91.635	Oreochromis_niloticus
ENSTNIG00000012228	cpsf2	100	84.450	ENSOANG00000003822	CPSF2	100	83.692	Ornithorhynchus_anatinus
ENSTNIG00000012228	cpsf2	100	84.197	ENSOCUG00000005713	CPSF2	100	83.439	Oryctolagus_cuniculus
ENSTNIG00000012228	cpsf2	100	87.199	ENSORLG00000011628	cpsf2	100	87.072	Oryzias_latipes
ENSTNIG00000012228	cpsf2	100	93.029	ENSORLG00020016980	cpsf2	100	92.015	Oryzias_latipes_hni
ENSTNIG00000012228	cpsf2	100	93.029	ENSORLG00015011910	cpsf2	100	92.015	Oryzias_latipes_hsok
ENSTNIG00000012228	cpsf2	100	92.785	ENSOMEG00000022876	cpsf2	100	91.772	Oryzias_melastigma
ENSTNIG00000012228	cpsf2	100	81.337	ENSOARG00000012889	CPSF2	100	80.580	Ovis_aries
ENSTNIG00000012228	cpsf2	100	84.450	ENSPPAG00000039666	CPSF2	100	83.692	Pan_paniscus
ENSTNIG00000012228	cpsf2	99	84.177	ENSPPRG00000010869	CPSF2	100	83.418	Panthera_pardus
ENSTNIG00000012228	cpsf2	100	84.197	ENSPTIG00000021202	CPSF2	100	83.439	Panthera_tigris_altaica
ENSTNIG00000012228	cpsf2	100	84.450	ENSPTRG00000006651	CPSF2	100	83.692	Pan_troglodytes
ENSTNIG00000012228	cpsf2	100	84.324	ENSPANG00000017417	CPSF2	100	83.565	Papio_anubis
ENSTNIG00000012228	cpsf2	100	83.312	ENSPKIG00000021453	cpsf2	100	82.301	Paramormyrops_kingsleyae
ENSTNIG00000012228	cpsf2	100	84.071	ENSPSIG00000006289	CPSF2	100	83.312	Pelodiscus_sinensis
ENSTNIG00000012228	cpsf2	76	86.401	ENSPMGG00000002511	cpsf2	99	85.880	Periophthalmus_magnuspinnatus
ENSTNIG00000012228	cpsf2	100	83.944	ENSPEMG00000007917	Cpsf2	100	83.186	Peromyscus_maniculatus_bairdii
ENSTNIG00000012228	cpsf2	100	72.716	ENSPMAG00000006205	cpsf2	100	72.015	Petromyzon_marinus
ENSTNIG00000012228	cpsf2	100	84.324	ENSPCIG00000011393	CPSF2	100	83.565	Phascolarctos_cinereus
ENSTNIG00000012228	cpsf2	100	92.269	ENSPFOG00000018648	cpsf2	100	91.255	Poecilia_formosa
ENSTNIG00000012228	cpsf2	100	92.269	ENSPLAG00000019199	cpsf2	99	91.255	Poecilia_latipinna
ENSTNIG00000012228	cpsf2	96	92.368	ENSPMEG00000012100	cpsf2	100	90.775	Poecilia_mexicana
ENSTNIG00000012228	cpsf2	100	92.015	ENSPREG00000008960	cpsf2	100	91.001	Poecilia_reticulata
ENSTNIG00000012228	cpsf2	64	80.000	ENSPPYG00000029685	-	100	80.000	Pongo_abelii
ENSTNIG00000012228	cpsf2	100	84.450	ENSPCAG00000012477	CPSF2	100	83.692	Procavia_capensis
ENSTNIG00000012228	cpsf2	100	84.450	ENSPCOG00000026387	CPSF2	100	83.692	Propithecus_coquereli
ENSTNIG00000012228	cpsf2	65	90.306	ENSPVAG00000004223	CPSF2	65	90.306	Pteropus_vampyrus
ENSTNIG00000012228	cpsf2	100	92.152	ENSPNYG00000023356	cpsf2	100	91.139	Pundamilia_nyererei
ENSTNIG00000012228	cpsf2	100	89.760	ENSPNAG00000001849	cpsf2	100	88.748	Pygocentrus_nattereri
ENSTNIG00000012228	cpsf2	100	83.692	ENSRNOG00000005733	Cpsf2	100	82.933	Rattus_norvegicus
ENSTNIG00000012228	cpsf2	100	84.324	ENSRBIG00000044792	CPSF2	100	83.565	Rhinopithecus_bieti
ENSTNIG00000012228	cpsf2	100	84.324	ENSRROG00000034875	CPSF2	100	83.565	Rhinopithecus_roxellana
ENSTNIG00000012228	cpsf2	100	84.197	ENSSBOG00000024571	CPSF2	100	83.439	Saimiri_boliviensis_boliviensis
ENSTNIG00000012228	cpsf2	100	84.324	ENSSHAG00000010458	CPSF2	100	83.565	Sarcophilus_harrisii
ENSTNIG00000012228	cpsf2	100	89.760	ENSSFOG00015002117	cpsf2	100	88.875	Scleropages_formosus
ENSTNIG00000012228	cpsf2	100	91.899	ENSSMAG00000002001	cpsf2	100	92.532	Scophthalmus_maximus
ENSTNIG00000012228	cpsf2	100	94.297	ENSSDUG00000004084	cpsf2	100	93.283	Seriola_dumerili
ENSTNIG00000012228	cpsf2	100	94.297	ENSSLDG00000024330	cpsf2	100	93.409	Seriola_lalandi_dorsalis
ENSTNIG00000012228	cpsf2	58	95.556	ENSSARG00000009784	-	63	95.556	Sorex_araneus
ENSTNIG00000012228	cpsf2	100	84.324	ENSSPUG00000013485	CPSF2	100	83.565	Sphenodon_punctatus
ENSTNIG00000012228	cpsf2	100	93.916	ENSSPAG00000013284	cpsf2	100	93.317	Stegastes_partitus
ENSTNIG00000012228	cpsf2	100	84.071	ENSSSCG00000002447	CPSF2	100	83.312	Sus_scrofa
ENSTNIG00000012228	cpsf2	100	84.430	ENSTGUG00000012571	-	100	83.671	Taeniopygia_guttata
ENSTNIG00000012228	cpsf2	100	97.592	ENSTRUG00000003742	cpsf2	100	97.592	Takifugu_rubripes
ENSTNIG00000012228	cpsf2	91	82.225	ENSTBEG00000004530	CPSF2	94	81.358	Tupaia_belangeri
ENSTNIG00000012228	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSTNIG00000012228	cpsf2	100	84.324	ENSUAMG00000028071	CPSF2	100	83.565	Ursus_americanus
ENSTNIG00000012228	cpsf2	100	84.324	ENSUMAG00000005029	CPSF2	100	83.565	Ursus_maritimus
ENSTNIG00000012228	cpsf2	99	84.177	ENSVPAG00000003503	CPSF2	100	83.418	Vicugna_pacos
ENSTNIG00000012228	cpsf2	100	84.324	ENSVVUG00000024642	CPSF2	100	83.565	Vulpes_vulpes
ENSTNIG00000012228	cpsf2	100	83.944	ENSXETG00000010289	cpsf2	100	83.439	Xenopus_tropicalis
ENSTNIG00000012228	cpsf2	100	92.395	ENSXCOG00000001764	cpsf2	100	91.381	Xiphophorus_couchianus
ENSTNIG00000012228	cpsf2	100	92.522	ENSXMAG00000017048	cpsf2	100	91.508	Xiphophorus_maculatus