EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000012449 (Gene tree)
Gene ID: -
Gene Symbol: zbtb48
Alias: fd07a08|wu:fd07a08|wu:fe16d08
Full Name: zinc finger and BTB domain containing 48
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2743 bases
Position: chr9:10023436-10026178
Accession: ZDB-GENE-030131-4450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000015419	zf-C2H2	PF00096.26	8.2e-38	1	5
ENSTNIP00000015419	zf-C2H2	PF00096.26	8.2e-38	2	5
ENSTNIP00000015419	zf-C2H2	PF00096.26	8.2e-38	3	5
ENSTNIP00000015419	zf-C2H2	PF00096.26	8.2e-38	4	5
ENSTNIP00000015419	zf-C2H2	PF00096.26	8.2e-38	5	5
ENSTNIP00000015419	zf-met	PF12874.7	9.9e-08	1	2
ENSTNIP00000015419	zf-met	PF12874.7	9.9e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000015625	-	1887	-	ENSTNIP00000015419	629 (aa)	-	H3D4I1

Gene Model

Click here to download ENSTNIG00000012449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000012449's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000012449	zbtb48	53	33.906	ENSTNIG00000019069	-	100	34.597
ENSTNIG00000012449	zbtb48	50	38.961	ENSTNIG00000018384	scrt1b	59	38.961
ENSTNIG00000012449	zbtb48	50	33.074	ENSTNIG00000008100	-	99	33.074
ENSTNIG00000012449	zbtb48	53	33.846	ENSTNIG00000011367	znf710b	51	32.907
ENSTNIG00000012449	zbtb48	50	36.986	ENSTNIG00000001164	ZNF628	98	36.986
ENSTNIG00000012449	zbtb48	56	35.857	ENSTNIG00000008154	-	100	35.857
ENSTNIG00000012449	zbtb48	95	31.765	ENSTNIG00000001094	hic2	99	30.573
ENSTNIG00000012449	zbtb48	96	38.532	ENSTNIG00000004384	ZBTB14	91	38.532
ENSTNIG00000012449	zbtb48	50	34.868	ENSTNIG00000011188	-	98	34.868
ENSTNIG00000012449	zbtb48	51	38.866	ENSTNIG00000000330	-	100	38.866
ENSTNIG00000012449	zbtb48	53	38.141	ENSTNIG00000008242	-	99	38.312
ENSTNIG00000012449	zbtb48	50	39.297	ENSTNIG00000005856	-	100	39.297
ENSTNIG00000012449	zbtb48	96	35.179	ENSTNIG00000010902	zbtb17	99	34.783
ENSTNIG00000012449	zbtb48	50	40.909	ENSTNIG00000000277	-	96	40.909
ENSTNIG00000012449	zbtb48	93	36.946	ENSTNIG00000010722	GZF1	97	37.931
ENSTNIG00000012449	zbtb48	59	31.803	ENSTNIG00000005798	zbtb16a	57	32.558
ENSTNIG00000012449	zbtb48	54	32.927	ENSTNIG00000000073	znf646	97	32.927
ENSTNIG00000012449	zbtb48	50	33.803	ENSTNIG00000005051	znf341	58	33.803
ENSTNIG00000012449	zbtb48	55	35.268	ENSTNIG00000005901	prdm5	74	35.268
ENSTNIG00000012449	zbtb48	52	34.628	ENSTNIG00000002343	-	83	34.628
ENSTNIG00000012449	zbtb48	53	36.429	ENSTNIG00000002344	-	100	36.145
ENSTNIG00000012449	zbtb48	96	33.094	ENSTNIG00000007805	zbtb41	81	33.094
ENSTNIG00000012449	zbtb48	50	40.260	ENSTNIG00000003865	-	55	40.260
ENSTNIG00000012449	zbtb48	56	36.747	ENSTNIG00000005023	-	99	36.747
ENSTNIG00000012449	zbtb48	50	37.059	ENSTNIG00000003834	gfi1b	57	37.126
ENSTNIG00000012449	zbtb48	51	31.447	ENSTNIG00000000320	-	100	40.667
ENSTNIG00000012449	zbtb48	50	37.113	ENSTNIG00000003979	-	99	37.113
ENSTNIG00000012449	zbtb48	50	38.411	ENSTNIG00000000934	-	97	38.411
ENSTNIG00000012449	zbtb48	50	45.783	ENSTNIG00000003479	-	100	45.783
ENSTNIG00000012449	zbtb48	60	37.838	ENSTNIG00000008504	snai2	52	37.838
ENSTNIG00000012449	zbtb48	52	32.432	ENSTNIG00000001159	si:dkey-89b17.4	99	32.432
ENSTNIG00000012449	zbtb48	51	38.667	ENSTNIG00000008200	-	99	38.667
ENSTNIG00000012449	zbtb48	53	38.158	ENSTNIG00000018984	-	99	38.312
ENSTNIG00000012449	zbtb48	57	32.534	ENSTNIG00000003880	znf319b	82	32.534
ENSTNIG00000012449	zbtb48	51	33.480	ENSTNIG00000000528	-	95	33.480
ENSTNIG00000012449	zbtb48	50	35.260	ENSTNIG00000001921	-	53	35.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000012449	zbtb48	85	87.295	ENSAPOG00000002861	zbtb48	100	87.295	Acanthochromis_polyacanthus
ENSTNIG00000012449	zbtb48	100	53.639	ENSAOCG00000008304	zbtb48	90	56.940	Amphiprion_ocellaris
ENSTNIG00000012449	zbtb48	99	69.499	ENSATEG00000024413	zbtb48	84	69.909	Anabas_testudineus
ENSTNIG00000012449	zbtb48	94	52.217	ENSCAPG00000012228	ZBTB48	90	52.217	Cavia_aperea
ENSTNIG00000012449	zbtb48	99	55.015	ENSDARG00000039263	zbtb48	85	54.436	Danio_rerio
ENSTNIG00000012449	zbtb48	99	50.774	ENSDORG00000009677	Zbtb48	90	50.464	Dipodomys_ordii
ENSTNIG00000012449	zbtb48	52	72.727	ENSFALG00000009796	ZBTB48	68	72.727	Ficedula_albicollis
ENSTNIG00000012449	zbtb48	75	72.727	ENSGALG00000000637	ZBTB48	82	73.667	Gallus_gallus
ENSTNIG00000012449	zbtb48	99	66.822	ENSGACG00000011187	zbtb48	100	66.822	Gasterosteus_aculeatus
ENSTNIG00000012449	zbtb48	99	65.102	ENSKMAG00000002963	zbtb48	86	66.250	Kryptolebias_marmoratus
ENSTNIG00000012449	zbtb48	58	71.279	ENSLBEG00000012151	zbtb48	89	71.244	Labrus_bergylta
ENSTNIG00000012449	zbtb48	53	72.424	ENSMGAG00000001275	ZBTB48	81	72.424	Meleagris_gallopavo
ENSTNIG00000012449	zbtb48	99	66.770	ENSMMOG00000014996	zbtb48	96	66.615	Mola_mola
ENSTNIG00000012449	zbtb48	99	61.321	ENSORLG00000019331	zbtb48	94	61.442	Oryzias_latipes
ENSTNIG00000012449	zbtb48	58	72.800	ENSORLG00020007790	zbtb48	64	72.751	Oryzias_latipes_hni
ENSTNIG00000012449	zbtb48	99	68.966	ENSORLG00015002568	zbtb48	93	68.947	Oryzias_latipes_hsok
ENSTNIG00000012449	zbtb48	99	59.875	ENSOMEG00000017762	zbtb48	94	60.218	Oryzias_melastigma
ENSTNIG00000012449	zbtb48	99	54.267	ENSPMGG00000019913	zbtb48	82	54.428	Periophthalmus_magnuspinnatus
ENSTNIG00000012449	zbtb48	62	64.721	ENSPVAG00000013020	ZBTB48	72	72.673	Pteropus_vampyrus
ENSTNIG00000012449	zbtb48	99	72.546	ENSSDUG00000004449	zbtb48	84	71.846	Seriola_dumerili
ENSTNIG00000012449	zbtb48	99	62.580	ENSSLDG00000017718	zbtb48	94	81.818	Seriola_lalandi_dorsalis
ENSTNIG00000012449	zbtb48	99	57.179	ENSSPUG00000011853	ZBTB48	86	65.152	Sphenodon_punctatus
ENSTNIG00000012449	zbtb48	52	72.727	ENSTGUG00000002589	ZBTB48	67	72.727	Taeniopygia_guttata
ENSTNIG00000012449	zbtb48	100	82.796	ENSTRUG00000008615	zbtb48	89	82.796	Takifugu_rubripes
ENSTNIG00000012449	zbtb48	88	51.852	ENSTBEG00000014014	ZBTB48	84	51.150	Tupaia_belangeri