EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTNIG00000012473 (Gene tree)
Gene ID
-
Gene Symbol
scrt2
Alias
fc69h09|wu:fc69h09|zgc:162551
Full Name
scratch family zinc finger 2
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Plus strand
Length
4391 bases
Position
chr9:9303762-9308152
Accession
ZDB-GENE-030131-4097
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000001842zf-C2H2PF00096.266.1e-2614
ENSTNIP00000001842zf-C2H2PF00096.266.1e-2624
ENSTNIP00000001842zf-C2H2PF00096.266.1e-2634
ENSTNIP00000001842zf-C2H2PF00096.266.1e-2644
ENSTNIP00000015443zf-C2H2PF00096.261.1e-2514
ENSTNIP00000015443zf-C2H2PF00096.261.1e-2524
ENSTNIP00000015443zf-C2H2PF00096.261.1e-2534
ENSTNIP00000015443zf-C2H2PF00096.261.1e-2544
ENSTNIP00000001842zf-metPF12874.72.8e-1011
ENSTNIP00000015443zf-metPF12874.75.2e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000015649-954-ENSTNIP00000015443317 (aa)-H3D4K5
ENSTNIT00000000900-864-ENSTNIP00000001842288 (aa)-H3C0S6
Gene Model
Click here to download ENSTNIG00000012473's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000012473's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000012473scrt25435.075ENSTNIG00000002344-9939.189
ENSTNIG00000012473scrt28256.364ENSTNIG00000005051znf3416556.364
ENSTNIG00000012473scrt25137.324ENSTNIG00000018984-9937.324
ENSTNIG00000012473scrt25844.737ENSTNIG00000000320-9744.737
ENSTNIG00000012473scrt25237.681ENSTNIG00000019069-9937.681
ENSTNIG00000012473scrt25336.719ENSTNIG00000001921-6536.719
ENSTNIG00000012473scrt25637.975ENSTNIG00000008242-9937.975
ENSTNIG00000012473scrt29669.424ENSTNIG00000018384scrt1b9669.424
ENSTNIG00000012473scrt25040.000ENSTNIG00000001159si:dkey-89b17.49740.000
ENSTNIG00000012473scrt25337.879ENSTNIG00000011188-9138.298
ENSTNIG00000012473scrt25344.872ENSTNIG00000003880znf319b6144.872
ENSTNIG00000012473scrt26237.037ENSTNIG00000010722GZF15936.986
ENSTNIG00000012473scrt25042.857ENSTNIG00000000934-9742.857
ENSTNIG00000012473scrt26736.170ENSTNIG00000008154-7936.170
ENSTNIG00000012473scrt25237.162ENSTNIG00000005479-9836.986
ENSTNIG00000012473scrt25240.000ENSTNIG00000000277-9340.000
ENSTNIG00000012473scrt25432.836ENSTNIG00000008100-9933.962
ENSTNIG00000012473scrt25141.379ENSTNIG00000000330-9641.379
ENSTNIG00000012473scrt25039.091ENSTNIG00000000073znf6469739.091
ENSTNIG00000012473scrt25035.780ENSTNIG00000011367znf710b5835.780
ENSTNIG00000012473scrt25537.037ENSTNIG00000008200-9937.121
ENSTNIG00000012473scrt29539.130ENSTNIG00000008504snai29839.130
ENSTNIG00000012473scrt26933.824ENSTNIG00000005798zbtb16a6333.824
ENSTNIG00000012473scrt25037.838ENSTNIG00000002343-8037.838
ENSTNIG00000012473scrt25241.270ENSTNIG00000003979-9941.270
ENSTNIG00000012473scrt25136.765ENSTNIG00000009831-9136.765
ENSTNIG00000012473scrt25136.220ENSTNIG00000001164ZNF6289836.913
ENSTNIG00000012473scrt25440.000ENSTNIG00000000528-9540.000
ENSTNIG00000012473scrt25744.872ENSTNIG00000005023-9944.872
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000012473scrt29766.197ENSAPOG00000015197-9766.197Acanthochromis_polyacanthus
ENSTNIG00000012473scrt29993.082ENSAPOG00000003680scrt29993.082Acanthochromis_polyacanthus
ENSTNIG00000012473scrt29771.326ENSAPOG00000009279scrt1b9671.326Acanthochromis_polyacanthus
ENSTNIG00000012473scrt210063.548ENSACIG00000001296-9964.174Amphilophus_citrinellus
ENSTNIG00000012473scrt210085.764ENSACIG00000012604scrt29985.764Amphilophus_citrinellus
ENSTNIG00000012473scrt29768.817ENSACIG00000013613scrt1b9668.817Amphilophus_citrinellus
ENSTNIG00000012473scrt29765.085ENSACIG00000006586-9765.085Amphilophus_citrinellus
ENSTNIG00000012473scrt29764.626ENSAOCG00000023304-9764.626Amphiprion_ocellaris
ENSTNIG00000012473scrt29771.326ENSAOCG00000003910scrt1b9671.326Amphiprion_ocellaris
ENSTNIG00000012473scrt29993.082ENSAOCG00000021557scrt29993.082Amphiprion_ocellaris
ENSTNIG00000012473scrt29771.326ENSAPEG00000000869scrt1b9671.326Amphiprion_percula
ENSTNIG00000012473scrt29993.082ENSAPEG00000022558scrt29993.082Amphiprion_percula
ENSTNIG00000012473scrt29764.626ENSAPEG00000005677-9764.626Amphiprion_percula
ENSTNIG00000012473scrt29771.326ENSATEG00000002302scrt1b9671.326Anabas_testudineus
ENSTNIG00000012473scrt29991.195ENSATEG00000023998scrt29991.195Anabas_testudineus
ENSTNIG00000012473scrt29767.606ENSATEG00000011660-9767.606Anabas_testudineus
ENSTNIG00000012473scrt29962.614ENSATEG00000003195-9962.614Anabas_testudineus
ENSTNIG00000012473scrt27676.364ENSACAG00000016109SCRT29576.364Anolis_carolinensis
ENSTNIG00000012473scrt29764.548ENSACLG00000012046-9764.548Astatotilapia_calliptera
ENSTNIG00000012473scrt29770.609ENSACLG00000007162scrt1b9670.609Astatotilapia_calliptera
ENSTNIG00000012473scrt29771.685ENSAMXG00000038085scrt1a9771.685Astyanax_mexicanus
ENSTNIG00000012473scrt28686.056ENSAMXG00000034158scrt29086.056Astyanax_mexicanus
ENSTNIG00000012473scrt29769.286ENSAMXG00000042624SCRT19869.286Astyanax_mexicanus
ENSTNIG00000012473scrt25761.212WBGene00000468ces-15961.212Caenorhabditis_elegans
ENSTNIG00000012473scrt28765.637ENSCPBG00000027613SCRT210066.023Chrysemys_picta_bellii
ENSTNIG00000012473scrt29769.286ENSCPBG00000018899SCRT19769.286Chrysemys_picta_bellii
ENSTNIG00000012473scrt28889.908ENSCGRG00000001380Scrt210089.908Cricetulus_griseus_crigri
ENSTNIG00000012473scrt29763.729ENSCSEG00000014892-9763.729Cynoglossus_semilaevis
ENSTNIG00000012473scrt29771.685ENSCSEG00000008596scrt1b9671.685Cynoglossus_semilaevis
ENSTNIG00000012473scrt29990.252ENSCSEG00000021542scrt29990.566Cynoglossus_semilaevis
ENSTNIG00000012473scrt29770.609ENSCVAG00000009561scrt1b9670.609Cyprinodon_variegatus
ENSTNIG00000012473scrt29992.767ENSCVAG00000021038scrt29993.082Cyprinodon_variegatus
ENSTNIG00000012473scrt210064.474ENSCVAG00000003190-10064.474Cyprinodon_variegatus
ENSTNIG00000012473scrt29772.043ENSDARG00000040214scrt1b9772.043Danio_rerio
ENSTNIG00000012473scrt29770.968ENSDARG00000100821scrt1a9770.968Danio_rerio
ENSTNIG00000012473scrt29771.942ENSELUG00000022228scrt1a9671.942Esox_lucius
ENSTNIG00000012473scrt29771.685ENSELUG00000005435scrt1b9671.685Esox_lucius
ENSTNIG00000012473scrt29986.025ENSELUG00000023883scrt29888.088Esox_lucius
ENSTNIG00000012473scrt28469.835ENSFALG00000005718SCRT29771.488Ficedula_albicollis
ENSTNIG00000012473scrt29756.940ENSFDAG00000008733SCRT19856.940Fukomys_damarensis
ENSTNIG00000012473scrt210090.278ENSFHEG00000005732scrt29990.278Fundulus_heteroclitus
ENSTNIG00000012473scrt29770.609ENSFHEG00000014820scrt1b9670.609Fundulus_heteroclitus
ENSTNIG00000012473scrt29764.626ENSFHEG00000009794-9764.626Fundulus_heteroclitus
ENSTNIG00000012473scrt29977.812ENSGMOG00000019519scrt29977.812Gadus_morhua
ENSTNIG00000012473scrt29670.504ENSGMOG00000000629scrt1b9670.504Gadus_morhua
ENSTNIG00000012473scrt29764.894ENSGALG00000028912SCRT29765.603Gallus_gallus
ENSTNIG00000012473scrt210086.601ENSGAFG00000003093scrt29987.107Gambusia_affinis
ENSTNIG00000012473scrt210063.574ENSGAFG00000009650-10063.574Gambusia_affinis
ENSTNIG00000012473scrt29770.609ENSGAFG00000007636scrt1b9670.609Gambusia_affinis
ENSTNIG00000012473scrt29669.424ENSGACG00000008982scrt1b9669.424Gasterosteus_aculeatus
ENSTNIG00000012473scrt29765.753ENSGACG00000004072-9765.753Gasterosteus_aculeatus
ENSTNIG00000012473scrt29768.571ENSGAGG00000011736SCRT19868.571Gopherus_agassizii
ENSTNIG00000012473scrt26581.183ENSGAGG00000020760-7181.720Gopherus_agassizii
ENSTNIG00000012473scrt29767.491ENSGAGG00000020761SCRT29767.845Gopherus_agassizii
ENSTNIG00000012473scrt29764.746ENSHBUG00000019101-9764.746Haplochromis_burtoni
ENSTNIG00000012473scrt29770.609ENSHBUG00000016621scrt1b9670.609Haplochromis_burtoni
ENSTNIG00000012473scrt29991.824ENSHBUG00000012492scrt29991.824Haplochromis_burtoni
ENSTNIG00000012473scrt29763.763ENSHCOG00000016179-9763.763Hippocampus_comes
ENSTNIG00000012473scrt29770.609ENSHCOG00000016704scrt1b9670.609Hippocampus_comes
ENSTNIG00000012473scrt210081.908ENSHCOG00000008116scrt29982.132Hippocampus_comes
ENSTNIG00000012473scrt29771.174ENSIPUG00000004551scrt1a9771.174Ictalurus_punctatus
ENSTNIG00000012473scrt29766.308ENSIPUG00000005547-9866.308Ictalurus_punctatus
ENSTNIG00000012473scrt29770.968ENSKMAG00000005484scrt1b9670.968Kryptolebias_marmoratus
ENSTNIG00000012473scrt29991.195ENSKMAG00000018087scrt29991.195Kryptolebias_marmoratus
ENSTNIG00000012473scrt29763.823ENSKMAG00000009489-10062.914Kryptolebias_marmoratus
ENSTNIG00000012473scrt29763.699ENSLBEG00000023388-9763.699Labrus_bergylta
ENSTNIG00000012473scrt29993.103ENSLBEG00000015419scrt29993.103Labrus_bergylta
ENSTNIG00000012473scrt29772.760ENSLACG00000003588SCRT19672.760Latimeria_chalumnae
ENSTNIG00000012473scrt29967.085ENSLOCG00000002246scrt29967.398Lepisosteus_oculatus
ENSTNIG00000012473scrt29773.835ENSLOCG00000007573scrt1b9773.835Lepisosteus_oculatus
ENSTNIG00000012473scrt25871.053ENSMFAG00000035496SCRT19070.984Macaca_fascicularis
ENSTNIG00000012473scrt29770.609ENSMAMG00000011698scrt1b9670.609Mastacembelus_armatus
ENSTNIG00000012473scrt29992.138ENSMAMG00000001291scrt29992.138Mastacembelus_armatus
ENSTNIG00000012473scrt29764.746ENSMZEG00005026702-9764.746Maylandia_zebra
ENSTNIG00000012473scrt29770.609ENSMZEG00005005627scrt1b9670.609Maylandia_zebra
ENSTNIG00000012473scrt29991.824ENSMZEG00005026445scrt29991.824Maylandia_zebra
ENSTNIG00000012473scrt28470.124ENSMGAG00000016579SCRT29770.954Meleagris_gallopavo
ENSTNIG00000012473scrt29765.085ENSMMOG00000018345-9765.085Mola_mola
ENSTNIG00000012473scrt29769.892ENSMMOG00000003327scrt1b9669.892Mola_mola
ENSTNIG00000012473scrt210094.322ENSMMOG00000009272scrt210094.637Mola_mola
ENSTNIG00000012473scrt210086.552ENSMALG00000013656scrt29986.552Monopterus_albus
ENSTNIG00000012473scrt29770.968ENSMALG00000012704scrt1b9670.968Monopterus_albus
ENSTNIG00000012473scrt29769.149ENSNBRG00000013983scrt1b9669.149Neolamprologus_brichardi
ENSTNIG00000012473scrt29764.746ENSNBRG00000014882-9764.746Neolamprologus_brichardi
ENSTNIG00000012473scrt210087.500ENSNBRG00000007221scrt29987.500Neolamprologus_brichardi
ENSTNIG00000012473scrt210068.385ENSONIG00000003152-10068.385Oreochromis_niloticus
ENSTNIG00000012473scrt29992.138ENSONIG00000016758scrt29992.138Oreochromis_niloticus
ENSTNIG00000012473scrt29762.258ENSONIG00000019809-10062.258Oreochromis_niloticus
ENSTNIG00000012473scrt29770.609ENSONIG00000006007scrt1b10068.041Oreochromis_niloticus
ENSTNIG00000012473scrt29770.609ENSORLG00000025651scrt1b9670.609Oryzias_latipes
ENSTNIG00000012473scrt210062.829ENSORLG00000022825-10062.829Oryzias_latipes
ENSTNIG00000012473scrt29991.509ENSORLG00000024051scrt29991.509Oryzias_latipes
ENSTNIG00000012473scrt29770.609ENSORLG00020012967scrt1b9670.609Oryzias_latipes_hni
ENSTNIG00000012473scrt29991.509ENSORLG00020011478scrt29991.509Oryzias_latipes_hni
ENSTNIG00000012473scrt210062.500ENSORLG00015010104-10062.500Oryzias_latipes_hsok
ENSTNIG00000012473scrt29991.509ENSORLG00015005524scrt29991.509Oryzias_latipes_hsok
ENSTNIG00000012473scrt29770.609ENSORLG00015019165scrt1b9670.609Oryzias_latipes_hsok
ENSTNIG00000012473scrt210064.120ENSOMEG00000000286-10064.120Oryzias_melastigma
ENSTNIG00000012473scrt29991.824ENSOMEG00000002661scrt29991.824Oryzias_melastigma
ENSTNIG00000012473scrt29770.609ENSOMEG00000003925scrt1b9670.609Oryzias_melastigma
ENSTNIG00000012473scrt29772.760ENSPKIG00000022303SCRT19772.760Paramormyrops_kingsleyae
ENSTNIG00000012473scrt29771.685ENSPKIG00000020085scrt1a9771.685Paramormyrops_kingsleyae
ENSTNIG00000012473scrt210085.121ENSPMGG00000016561scrt29985.121Periophthalmus_magnuspinnatus
ENSTNIG00000012473scrt29765.172ENSPMGG00000021402-9765.172Periophthalmus_magnuspinnatus
ENSTNIG00000012473scrt29769.784ENSPMGG00000002260scrt1b9669.784Periophthalmus_magnuspinnatus
ENSTNIG00000012473scrt29992.767ENSPFOG00000007738scrt29993.082Poecilia_formosa
ENSTNIG00000012473scrt210063.000ENSPFOG00000005616-10063.000Poecilia_formosa
ENSTNIG00000012473scrt29770.609ENSPFOG00000017719scrt1b9670.609Poecilia_formosa
ENSTNIG00000012473scrt29770.609ENSPLAG00000009876scrt1b9670.609Poecilia_latipinna
ENSTNIG00000012473scrt210063.000ENSPLAG00000011718-10063.000Poecilia_latipinna
ENSTNIG00000012473scrt210091.003ENSPLAG00000005765scrt29991.003Poecilia_latipinna
ENSTNIG00000012473scrt210063.000ENSPMEG00000011706-10063.000Poecilia_mexicana
ENSTNIG00000012473scrt29770.609ENSPMEG00000013274scrt1b9670.609Poecilia_mexicana
ENSTNIG00000012473scrt210091.003ENSPMEG00000001538scrt29991.003Poecilia_mexicana
ENSTNIG00000012473scrt210062.667ENSPREG00000012166-10062.667Poecilia_reticulata
ENSTNIG00000012473scrt29993.082ENSPREG00000001147scrt29993.396Poecilia_reticulata
ENSTNIG00000012473scrt29770.609ENSPREG00000018985scrt1b9670.609Poecilia_reticulata
ENSTNIG00000012473scrt29770.609ENSPNYG00000017733scrt1b9670.609Pundamilia_nyererei
ENSTNIG00000012473scrt210087.500ENSPNYG00000013109scrt29987.500Pundamilia_nyererei
ENSTNIG00000012473scrt29764.746ENSPNYG00000008865-9764.746Pundamilia_nyererei
ENSTNIG00000012473scrt29767.143ENSPNAG00000027880-9869.643Pygocentrus_nattereri
ENSTNIG00000012473scrt29771.685ENSPNAG00000017415scrt1a9771.685Pygocentrus_nattereri
ENSTNIG00000012473scrt29772.043ENSSFOG00015001195SCRT19772.043Scleropages_formosus
ENSTNIG00000012473scrt29769.892ENSSMAG00000019207scrt1b9669.892Scophthalmus_maximus
ENSTNIG00000012473scrt29764.068ENSSMAG00000005122-9764.068Scophthalmus_maximus
ENSTNIG00000012473scrt29771.326ENSSDUG00000007752scrt1b9671.326Seriola_dumerili
ENSTNIG00000012473scrt29787.338ENSSDUG00000001637scrt29587.338Seriola_dumerili
ENSTNIG00000012473scrt29765.306ENSSDUG00000013215-9765.306Seriola_dumerili
ENSTNIG00000012473scrt29771.326ENSSLDG00000017166scrt1b9671.326Seriola_lalandi_dorsalis
ENSTNIG00000012473scrt29765.306ENSSLDG00000016454-9765.306Seriola_lalandi_dorsalis
ENSTNIG00000012473scrt29992.767ENSSLDG00000013565scrt29992.767Seriola_lalandi_dorsalis
ENSTNIG00000012473scrt29769.039ENSSPUG00000018637SCRT29769.395Sphenodon_punctatus
ENSTNIG00000012473scrt210088.889ENSSPAG00000014018scrt29988.889Stegastes_partitus
ENSTNIG00000012473scrt29771.326ENSSPAG00000002200scrt1b9671.326Stegastes_partitus
ENSTNIG00000012473scrt29764.966ENSSPAG00000006788-9764.966Stegastes_partitus
ENSTNIG00000012473scrt28469.710ENSTGUG00000006801SCRT29971.369Taeniopygia_guttata
ENSTNIG00000012473scrt28466.942ENSTRUG00000019558-7967.355Takifugu_rubripes
ENSTNIG00000012473scrt29670.144ENSTRUG00000011637scrt1b9770.144Takifugu_rubripes
ENSTNIG00000012473scrt210093.691ENSTRUG00000007620scrt210093.691Takifugu_rubripes
ENSTNIG00000012473scrt29764.407ENSTRUG00000012719-9764.407Takifugu_rubripes
ENSTNIG00000012473scrt29770.609ENSXCOG00000019675scrt1b9670.609Xiphophorus_couchianus
ENSTNIG00000012473scrt210086.601ENSXCOG00000014367scrt29987.107Xiphophorus_couchianus
ENSTNIG00000012473scrt210062.069ENSXCOG00000019861-10062.069Xiphophorus_couchianus
ENSTNIG00000012473scrt29992.767ENSXMAG00000028567scrt29993.082Xiphophorus_maculatus
ENSTNIG00000012473scrt29770.609ENSXMAG00000027885scrt1b9670.609Xiphophorus_maculatus
ENSTNIG00000012473scrt210062.667ENSXMAG00000015353-10062.667Xiphophorus_maculatus

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