EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000012515 (Gene tree)
Gene ID: -
Gene Symbol: zgc:56699
Alias: -
Full Name: zgc:56699
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1518 bases
Position: chr9:8841650-8843167
Accession: ZDB-GENE-040426-2099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000003159	zf-U11-48K	PF05253.12	3.8e-21	1	2
ENSTNIP00000003159	zf-U11-48K	PF05253.12	3.8e-21	2	2
ENSTNIP00000015484	zf-U11-48K	PF05253.12	6.4e-21	1	2
ENSTNIP00000015484	zf-U11-48K	PF05253.12	6.4e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000015690	-	580	-	ENSTNIP00000015484	148 (aa)	-	Q4S5Y0
ENSTNIT00000000293	-	508	-	ENSTNIP00000003159	124 (aa)	-	H3C4J0

Gene Model

Click here to download ENSTNIG00000012515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000012515's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000012515	zgc:56699	95	56.738	ENSAPOG00000021951	-	81	56.738	Acanthochromis_polyacanthus
ENSTNIG00000012515	zgc:56699	70	59.223	ENSAPOG00000000311	-	63	59.223	Acanthochromis_polyacanthus
ENSTNIG00000012515	zgc:56699	97	61.379	ENSACIG00000013400	zgc:56699	81	61.379	Amphilophus_citrinellus
ENSTNIG00000012515	zgc:56699	95	56.643	ENSAOCG00000013650	-	81	56.643	Amphiprion_ocellaris
ENSTNIG00000012515	zgc:56699	94	57.265	ENSAPEG00000006689	zgc:56699	77	57.265	Amphiprion_percula
ENSTNIG00000012515	zgc:56699	97	63.448	ENSATEG00000024058	zgc:56699	81	63.448	Anabas_testudineus
ENSTNIG00000012515	zgc:56699	97	64.865	ENSACLG00000023562	zgc:56699	76	64.865	Astatotilapia_calliptera
ENSTNIG00000012515	zgc:56699	76	47.788	ENSAMXG00000036095	-	57	47.059	Astyanax_mexicanus
ENSTNIG00000012515	zgc:56699	100	52.632	ENSAMXG00000038346	zgc:56699	84	52.632	Astyanax_mexicanus
ENSTNIG00000012515	zgc:56699	97	58.621	ENSCSEG00000021520	zgc:56699	69	58.621	Cynoglossus_semilaevis
ENSTNIG00000012515	zgc:56699	73	56.667	ENSCVAG00000009972	zgc:56699	56	59.406	Cyprinodon_variegatus
ENSTNIG00000012515	zgc:56699	97	46.667	ENSDARG00000000887	zgc:56699	82	46.667	Danio_rerio
ENSTNIG00000012515	zgc:56699	78	52.500	ENSDARG00000099586	CR382383.2	67	52.500	Danio_rerio
ENSTNIG00000012515	zgc:56699	70	30.097	FBgn0036826	arx	57	30.097	Drosophila_melanogaster
ENSTNIG00000012515	zgc:56699	67	43.182	ENSEBUG00000000411	-	53	43.182	Eptatretus_burgeri
ENSTNIG00000012515	zgc:56699	66	38.776	ENSEBUG00000005681	-	52	38.776	Eptatretus_burgeri
ENSTNIG00000012515	zgc:56699	95	40.278	ENSEBUG00000005577	-	76	40.278	Eptatretus_burgeri
ENSTNIG00000012515	zgc:56699	89	52.174	ENSELUG00000003242	gtsf1	66	59.350	Esox_lucius
ENSTNIG00000012515	zgc:56699	98	57.025	ENSFHEG00000006036	zgc:56699	78	57.025	Fundulus_heteroclitus
ENSTNIG00000012515	zgc:56699	72	60.674	ENSGMOG00000007295	zgc:56699	73	60.674	Gadus_morhua
ENSTNIG00000012515	zgc:56699	76	44.068	ENSGALG00000035365	-	67	44.068	Gallus_gallus
ENSTNIG00000012515	zgc:56699	95	60.839	ENSGAFG00000020743	zgc:56699	80	60.839	Gambusia_affinis
ENSTNIG00000012515	zgc:56699	97	64.189	ENSHBUG00000005327	zgc:56699	82	64.189	Haplochromis_burtoni
ENSTNIG00000012515	zgc:56699	93	46.763	ENSHCOG00000010296	-	79	46.763	Hippocampus_comes
ENSTNIG00000012515	zgc:56699	97	43.624	ENSIPUG00000011498	zgc:56699	79	43.624	Ictalurus_punctatus
ENSTNIG00000012515	zgc:56699	98	64.626	ENSLBEG00000015981	zgc:56699	83	63.115	Labrus_bergylta
ENSTNIG00000012515	zgc:56699	62	57.143	ENSLOCG00000004469	zgc:56699	77	47.748	Lepisosteus_oculatus
ENSTNIG00000012515	zgc:56699	86	65.385	ENSMAMG00000001846	zgc:56699	71	65.385	Mastacembelus_armatus
ENSTNIG00000012515	zgc:56699	97	64.865	ENSMZEG00005026479	zgc:56699	76	64.865	Maylandia_zebra
ENSTNIG00000012515	zgc:56699	94	50.336	ENSMMOG00000017331	zgc:56699	81	50.336	Mola_mola
ENSTNIG00000012515	zgc:56699	97	64.189	ENSNBRG00000006336	zgc:56699	82	64.189	Neolamprologus_brichardi
ENSTNIG00000012515	zgc:56699	97	63.514	ENSONIG00000016720	zgc:56699	76	63.514	Oreochromis_niloticus
ENSTNIG00000012515	zgc:56699	74	40.541	ENSOANG00000030381	-	74	40.541	Ornithorhynchus_anatinus
ENSTNIG00000012515	zgc:56699	94	51.079	ENSORLG00000025877	-	83	51.079	Oryzias_latipes
ENSTNIG00000012515	zgc:56699	98	47.297	ENSORLG00000015258	-	83	47.297	Oryzias_latipes
ENSTNIG00000012515	zgc:56699	98	47.586	ENSORLG00020010990	-	83	47.586	Oryzias_latipes_hni
ENSTNIG00000012515	zgc:56699	94	51.079	ENSORLG00020011013	-	83	51.079	Oryzias_latipes_hni
ENSTNIG00000012515	zgc:56699	98	48.966	ENSORLG00015004961	zgc:56699	83	48.966	Oryzias_latipes_hsok
ENSTNIG00000012515	zgc:56699	93	53.623	ENSOMEG00000021773	-	77	53.623	Oryzias_melastigma
ENSTNIG00000012515	zgc:56699	93	53.285	ENSOMEG00000013200	-	89	53.285	Oryzias_melastigma
ENSTNIG00000012515	zgc:56699	98	54.795	ENSOMEG00000021739	-	83	54.795	Oryzias_melastigma
ENSTNIG00000012515	zgc:56699	97	48.980	ENSPKIG00000017039	zgc:56699	82	48.980	Paramormyrops_kingsleyae
ENSTNIG00000012515	zgc:56699	86	61.832	ENSPMGG00000023241	zgc:56699	78	61.832	Periophthalmus_magnuspinnatus
ENSTNIG00000012515	zgc:56699	70	44.954	ENSPMAG00000009653	-	84	44.954	Petromyzon_marinus
ENSTNIG00000012515	zgc:56699	61	38.158	ENSPCIG00000006734	-	95	38.158	Phascolarctos_cinereus
ENSTNIG00000012515	zgc:56699	95	61.538	ENSPFOG00000009204	zgc:56699	80	61.538	Poecilia_formosa
ENSTNIG00000012515	zgc:56699	93	61.739	ENSPLAG00000009088	zgc:56699	76	63.077	Poecilia_latipinna
ENSTNIG00000012515	zgc:56699	95	61.538	ENSPMEG00000001443	zgc:56699	80	61.538	Poecilia_mexicana
ENSTNIG00000012515	zgc:56699	95	60.140	ENSPREG00000000745	zgc:56699	80	60.140	Poecilia_reticulata
ENSTNIG00000012515	zgc:56699	97	64.865	ENSPNYG00000002811	zgc:56699	82	64.865	Pundamilia_nyererei
ENSTNIG00000012515	zgc:56699	97	55.333	ENSPNAG00000005165	zgc:56699	82	55.333	Pygocentrus_nattereri
ENSTNIG00000012515	zgc:56699	84	54.839	ENSSFOG00015021600	zgc:56699	69	54.839	Scleropages_formosus
ENSTNIG00000012515	zgc:56699	97	59.864	ENSSMAG00000020886	zgc:56699	82	59.864	Scophthalmus_maximus
ENSTNIG00000012515	zgc:56699	97	60.959	ENSSDUG00000002033	zgc:56699	81	60.959	Seriola_dumerili
ENSTNIG00000012515	zgc:56699	97	60.274	ENSSLDG00000014113	zgc:56699	81	60.274	Seriola_lalandi_dorsalis
ENSTNIG00000012515	zgc:56699	94	47.482	ENSSPAG00000019854	-	82	55.634	Stegastes_partitus
ENSTNIG00000012515	zgc:56699	94	53.793	ENSSPAG00000010005	-	92	53.793	Stegastes_partitus
ENSTNIG00000012515	zgc:56699	99	69.178	ENSTRUG00000015537	zgc:56699	82	69.178	Takifugu_rubripes
ENSTNIG00000012515	zgc:56699	85	63.281	ENSXCOG00000014400	zgc:56699	70	63.281	Xiphophorus_couchianus
ENSTNIG00000012515	zgc:56699	95	60.839	ENSXMAG00000011692	zgc:56699	80	60.839	Xiphophorus_maculatus