EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTNIG00000012672 (Gene tree)
Gene ID
-
Gene Symbol
snrpf
Alias
snrpfl
Full Name
small nuclear ribonucleoprotein polypeptide F
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Minus strand
Length
1488 bases
Position
chr19:1520267-1521754
Accession
ZDB-GENE-040930-9
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000015646LSMPF01423.221.2e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000015853-534-ENSTNIP0000001564686 (aa)-H3D557
Gene Model
Click here to download ENSTNIG00000012672's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000012672's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000012672snrpf7748.485ENSTNIG00000017725lsm68348.485
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000012672snrpf10096.512ENSG00000139343SNRPF10096.512Homo_sapiens
ENSTNIG00000012672snrpf9998.824ENSAPOG00000003377snrpf6698.824Acanthochromis_polyacanthus
ENSTNIG00000012672snrpf9996.471ENSAMEG00000002166-10096.471Ailuropoda_melanoleuca
ENSTNIG00000012672snrpf8882.895ENSAMEG00000018718-8784.000Ailuropoda_melanoleuca
ENSTNIG00000012672snrpf9898.810ENSACIG00000013216snrpf9998.810Amphilophus_citrinellus
ENSTNIG00000012672snrpf9898.810ENSAOCG00000015108snrpf9998.810Amphiprion_ocellaris
ENSTNIG00000012672snrpf9898.810ENSAPEG00000022022snrpf9998.810Amphiprion_percula
ENSTNIG00000012672snrpf9898.810ENSATEG00000022625snrpf9098.810Anabas_testudineus
ENSTNIG00000012672snrpf8694.595ENSACAG00000014073SNRPF8594.595Anolis_carolinensis
ENSTNIG00000012672snrpf10096.512ENSANAG00000032845SNRPF10096.512Aotus_nancymaae
ENSTNIG00000012672snrpf8768.000ENSANAG00000025860-8568.000Aotus_nancymaae
ENSTNIG00000012672snrpf8387.324ENSANAG00000020297-6587.324Aotus_nancymaae
ENSTNIG00000012672snrpf9898.810ENSACLG00000016066snrpf9998.810Astatotilapia_calliptera
ENSTNIG00000012672snrpf8796.000ENSAMXG00000007421snrpf8796.000Astyanax_mexicanus
ENSTNIG00000012672snrpf9189.744ENSBTAG00000050012-9389.333Bos_taurus
ENSTNIG00000012672snrpf10096.512ENSBTAG00000016271SNRPF10096.512Bos_taurus
ENSTNIG00000012672snrpf9070.130WBGene00004918snr-58572.222Caenorhabditis_elegans
ENSTNIG00000012672snrpf10096.512ENSCJAG00000002705-10096.512Callithrix_jacchus
ENSTNIG00000012672snrpf10096.512ENSCAFG00000006395-7796.512Canis_familiaris
ENSTNIG00000012672snrpf8587.671ENSCAFG00000031151-8590.411Canis_familiaris
ENSTNIG00000012672snrpf9184.615ENSCAFG00020013161-7492.857Canis_lupus_dingo
ENSTNIG00000012672snrpf8587.671ENSCAFG00020010823-8590.411Canis_lupus_dingo
ENSTNIG00000012672snrpf9490.123ENSTSYG00000031636-6191.781Carlito_syrichta
ENSTNIG00000012672snrpf8782.667ENSTSYG00000030635-8782.667Carlito_syrichta
ENSTNIG00000012672snrpf8792.105ENSTSYG00000036502-8792.105Carlito_syrichta
ENSTNIG00000012672snrpf9996.471ENSCAPG00000007242SNRPF10096.471Cavia_aperea
ENSTNIG00000012672snrpf10096.512ENSCPOG00000013898SNRPF10096.512Cavia_porcellus
ENSTNIG00000012672snrpf10084.884ENSCCAG00000033627-5985.333Cebus_capucinus
ENSTNIG00000012672snrpf10096.512ENSCCAG00000037378-10096.512Cebus_capucinus
ENSTNIG00000012672snrpf10095.349ENSCCAG00000017356-8796.000Cebus_capucinus
ENSTNIG00000012672snrpf10096.512ENSCLAG00000007200SNRPF10096.512Chinchilla_lanigera
ENSTNIG00000012672snrpf10096.512ENSCSAG00000003602-7096.512Chlorocebus_sabaeus
ENSTNIG00000012672snrpf7495.312ENSCHOG00000009392SNRPF10095.312Choloepus_hoffmanni
ENSTNIG00000012672snrpf9990.588ENSCPBG00000024287-6091.892Chrysemys_picta_bellii
ENSTNIG00000012672snrpf10086.047ENSCPBG00000026463-8786.667Chrysemys_picta_bellii
ENSTNIG00000012672snrpf8788.000ENSCPBG00000006227-8788.000Chrysemys_picta_bellii
ENSTNIG00000012672snrpf10084.884ENSCPBG00000001985-8986.667Chrysemys_picta_bellii
ENSTNIG00000012672snrpf9988.235ENSCSAVG00000007498-8490.541Ciona_savignyi
ENSTNIG00000012672snrpf10096.512ENSCGRG00001017100-10096.512Cricetulus_griseus_chok1gshd
ENSTNIG00000012672snrpf8788.000ENSCGRG00001008965-5888.000Cricetulus_griseus_chok1gshd
ENSTNIG00000012672snrpf10096.512ENSCGRG00000000336-10096.512Cricetulus_griseus_crigri
ENSTNIG00000012672snrpf9388.750ENSCGRG00000018878-9488.000Cricetulus_griseus_crigri
ENSTNIG00000012672snrpf10097.674ENSCSEG00000004748snrpf10097.674Cynoglossus_semilaevis
ENSTNIG00000012672snrpf9998.824ENSCVAG00000000397snrpf6798.824Cyprinodon_variegatus
ENSTNIG00000012672snrpf10096.591ENSDARG00000105037snrpf10096.591Danio_rerio
ENSTNIG00000012672snrpf8794.667ENSDNOG00000048989-6794.667Dasypus_novemcinctus
ENSTNIG00000012672snrpf10096.512ENSDNOG00000043775-5596.512Dasypus_novemcinctus
ENSTNIG00000012672snrpf8780.000ENSDNOG00000049373-6580.000Dasypus_novemcinctus
ENSTNIG00000012672snrpf8486.111ENSDORG00000025351-10086.111Dipodomys_ordii
ENSTNIG00000012672snrpf6993.220ENSDORG00000029740-7293.220Dipodomys_ordii
ENSTNIG00000012672snrpf9877.381FBgn0000426SmF8380.822Drosophila_melanogaster
ENSTNIG00000012672snrpf10096.512ENSETEG00000001558-10096.512Echinops_telfairi
ENSTNIG00000012672snrpf9576.829ENSEBUG00000001793-7288.060Eptatretus_burgeri
ENSTNIG00000012672snrpf10096.512ENSECAG00000019817SNRPF7096.512Equus_caballus
ENSTNIG00000012672snrpf9996.471ENSEEUG00000013509SNRPF10096.471Erinaceus_europaeus
ENSTNIG00000012672snrpf10096.512ENSELUG00000003121RUXF10096.512Esox_lucius
ENSTNIG00000012672snrpf10093.023ENSELUG00000007737RUXF8694.667Esox_lucius
ENSTNIG00000012672snrpf8773.333ENSFCAG00000021942-8773.333Felis_catus
ENSTNIG00000012672snrpf10096.512ENSFCAG00000029966-10096.512Felis_catus
ENSTNIG00000012672snrpf9875.000ENSFCAG00000031148-7273.077Felis_catus
ENSTNIG00000012672snrpf9996.471ENSFALG00000010799SNRPF9996.471Ficedula_albicollis
ENSTNIG00000012672snrpf10096.512ENSFDAG00000002831-10096.512Fukomys_damarensis
ENSTNIG00000012672snrpf9998.824ENSFHEG00000003240snrpf7598.824Fundulus_heteroclitus
ENSTNIG00000012672snrpf9998.824ENSGMOG00000007741snrpf10098.824Gadus_morhua
ENSTNIG00000012672snrpf10096.512ENSGALG00000011409SNRPF10096.512Gallus_gallus
ENSTNIG00000012672snrpf9898.810ENSGAFG00000016187snrpf9798.810Gambusia_affinis
ENSTNIG00000012672snrpf9997.647ENSGACG00000020055snrpf10097.647Gasterosteus_aculeatus
ENSTNIG00000012672snrpf9287.342ENSGAGG00000022991-8089.706Gopherus_agassizii
ENSTNIG00000012672snrpf7291.935ENSGAGG00000020974-5489.062Gopherus_agassizii
ENSTNIG00000012672snrpf8082.609ENSGAGG00000014132-8382.609Gopherus_agassizii
ENSTNIG00000012672snrpf8689.189ENSGAGG00000012945-6990.667Gopherus_agassizii
ENSTNIG00000012672snrpf7086.667ENSGAGG00000011163-8689.796Gopherus_agassizii
ENSTNIG00000012672snrpf9275.949ENSGGOG00000039564-9074.667Gorilla_gorilla
ENSTNIG00000012672snrpf10096.512ENSGGOG00000001127-10096.512Gorilla_gorilla
ENSTNIG00000012672snrpf9877.381ENSGGOG00000039936-8374.667Gorilla_gorilla
ENSTNIG00000012672snrpf8794.667ENSHGLG00000021172-8794.667Heterocephalus_glaber_female
ENSTNIG00000012672snrpf10096.512ENSHGLG00000009108SNRPF10096.512Heterocephalus_glaber_female
ENSTNIG00000012672snrpf8794.667ENSHGLG00100019596-8794.667Heterocephalus_glaber_male
ENSTNIG00000012672snrpf9996.471ENSHGLG00100008103-10096.471Heterocephalus_glaber_male
ENSTNIG00000012672snrpf7387.143ENSHCOG00000018663snrpf5587.143Hippocampus_comes
ENSTNIG00000012672snrpf10098.837ENSIPUG00000018994snrpf10098.837Ictalurus_punctatus
ENSTNIG00000012672snrpf10096.512ENSSTOG00000010434-10096.512Ictidomys_tridecemlineatus
ENSTNIG00000012672snrpf10077.907ENSJJAG00000004558-8978.667Jaculus_jaculus
ENSTNIG00000012672snrpf10081.395ENSJJAG00000010502-8982.667Jaculus_jaculus
ENSTNIG00000012672snrpf10096.512ENSJJAG00000011272-10096.512Jaculus_jaculus
ENSTNIG00000012672snrpf7891.045ENSJJAG00000004828-8692.857Jaculus_jaculus
ENSTNIG00000012672snrpf10097.674ENSKMAG00000013566snrpf10097.674Kryptolebias_marmoratus
ENSTNIG00000012672snrpf100100.000ENSLBEG00000008800snrpf100100.000Labrus_bergylta
ENSTNIG00000012672snrpf10095.349ENSLACG00000002456-7495.349Latimeria_chalumnae
ENSTNIG00000012672snrpf10096.512ENSLOCG00000015744snrpf10096.512Lepisosteus_oculatus
ENSTNIG00000012672snrpf9996.471ENSLAFG00000017426SNRPF9996.471Loxodonta_africana
ENSTNIG00000012672snrpf98100.000ENSMAMG00000016593snrpf99100.000Mastacembelus_armatus
ENSTNIG00000012672snrpf9898.810ENSMZEG00005014701snrpf9998.810Maylandia_zebra
ENSTNIG00000012672snrpf9896.429ENSMGAG00000011453-7696.429Meleagris_gallopavo
ENSTNIG00000012672snrpf8792.000ENSMAUG00000008799-8792.000Mesocricetus_auratus
ENSTNIG00000012672snrpf7188.525ENSMAUG00000010289-6692.000Mesocricetus_auratus
ENSTNIG00000012672snrpf7395.238ENSMAUG00000019737-8595.238Mesocricetus_auratus
ENSTNIG00000012672snrpf7395.238ENSMAUG00000016909-8595.238Mesocricetus_auratus
ENSTNIG00000012672snrpf10096.512ENSMICG00000012153-10096.512Microcebus_murinus
ENSTNIG00000012672snrpf8789.333ENSMICG00000030494-6089.333Microcebus_murinus
ENSTNIG00000012672snrpf7980.882ENSMOCG00000020220-8780.882Microtus_ochrogaster
ENSTNIG00000012672snrpf10096.512ENSMOCG00000020437Snrpf10096.512Microtus_ochrogaster
ENSTNIG00000012672snrpf8782.667ENSMOCG00000022166-8282.667Microtus_ochrogaster
ENSTNIG00000012672snrpf9997.647ENSMMOG00000007127snrpf10097.647Mola_mola
ENSTNIG00000012672snrpf10096.512ENSMODG00000008091SNRPF7596.512Monodelphis_domestica
ENSTNIG00000012672snrpf9898.810ENSMALG00000012328snrpf9998.810Monopterus_albus
ENSTNIG00000012672snrpf10096.512MGP_CAROLIEiJ_G0015735-10096.512Mus_caroli
ENSTNIG00000012672snrpf10096.512ENSMUSG00000020018Snrpf10096.512Mus_musculus
ENSTNIG00000012672snrpf10096.512MGP_PahariEiJ_G0031350Snrpf10096.512Mus_pahari
ENSTNIG00000012672snrpf10096.512MGP_SPRETEiJ_G0016553Snrpf10096.512Mus_spretus
ENSTNIG00000012672snrpf10096.512ENSMPUG00000007176-7796.512Mustela_putorius_furo
ENSTNIG00000012672snrpf10096.512ENSMLUG00000027932-8196.512Myotis_lucifugus
ENSTNIG00000012672snrpf9996.471ENSMLUG00000013577-10096.471Myotis_lucifugus
ENSTNIG00000012672snrpf10076.744ENSMLUG00000026269-7174.667Myotis_lucifugus
ENSTNIG00000012672snrpf10096.512ENSMLUG00000026149-8196.512Myotis_lucifugus
ENSTNIG00000012672snrpf10096.512ENSMLUG00000029201-8196.512Myotis_lucifugus
ENSTNIG00000012672snrpf7388.889ENSNGAG00000005851-7188.333Nannospalax_galili
ENSTNIG00000012672snrpf10096.512ENSNGAG00000024292-10096.512Nannospalax_galili
ENSTNIG00000012672snrpf9998.824ENSNBRG00000011682snrpf8798.824Neolamprologus_brichardi
ENSTNIG00000012672snrpf8670.270ENSMEUG00000000671SNRPF8770.270Notamacropus_eugenii
ENSTNIG00000012672snrpf10096.512ENSODEG00000010328-10096.512Octodon_degus
ENSTNIG00000012672snrpf10095.349ENSOCUG00000010925SNRPF7695.349Oryctolagus_cuniculus
ENSTNIG00000012672snrpf8695.946ENSORLG00020008216snrpf8795.946Oryzias_latipes_hni
ENSTNIG00000012672snrpf8695.946ENSORLG00015007418snrpf8795.946Oryzias_latipes_hsok
ENSTNIG00000012672snrpf9897.619ENSOMEG00000003018snrpf9997.619Oryzias_melastigma
ENSTNIG00000012672snrpf8794.667ENSOGAG00000030323-8794.667Otolemur_garnettii
ENSTNIG00000012672snrpf10096.512ENSOARG00000011853-7596.512Ovis_aries
ENSTNIG00000012672snrpf9275.949ENSPPAG00000037479-9174.667Pan_paniscus
ENSTNIG00000012672snrpf9877.381ENSPPAG00000037544-8374.667Pan_paniscus
ENSTNIG00000012672snrpf10096.512ENSPPRG00000005875-10096.512Panthera_pardus
ENSTNIG00000012672snrpf9873.810ENSPPRG00000007449-7773.333Panthera_pardus
ENSTNIG00000012672snrpf10096.512ENSPTIG00000007520SNRPF10096.512Panthera_tigris_altaica
ENSTNIG00000012672snrpf9876.190ENSPTIG00000005117-8973.333Panthera_tigris_altaica
ENSTNIG00000012672snrpf9275.949ENSPTRG00000047717-9174.667Pan_troglodytes
ENSTNIG00000012672snrpf9877.381ENSPTRG00000043814-8374.667Pan_troglodytes
ENSTNIG00000012672snrpf9998.824ENSPKIG00000014784snrpf9398.824Paramormyrops_kingsleyae
ENSTNIG00000012672snrpf9996.471ENSPSIG00000016462SNRPF9996.471Pelodiscus_sinensis
ENSTNIG00000012672snrpf9997.647ENSPMGG00000023548snrpf10097.647Periophthalmus_magnuspinnatus
ENSTNIG00000012672snrpf10096.512ENSPEMG00000023326Snrpf10096.512Peromyscus_maniculatus_bairdii
ENSTNIG00000012672snrpf9898.810ENSPLAG00000023932snrpf9998.810Poecilia_latipinna
ENSTNIG00000012672snrpf9898.810ENSPMEG00000003377snrpf9998.810Poecilia_mexicana
ENSTNIG00000012672snrpf9898.810ENSPREG00000022635snrpf9798.810Poecilia_reticulata
ENSTNIG00000012672snrpf10096.512ENSPPYG00000004847-10096.512Pongo_abelii
ENSTNIG00000012672snrpf10096.512ENSPCOG00000023833-10096.512Propithecus_coquereli
ENSTNIG00000012672snrpf10096.512ENSPVAG00000009036SNRPF10096.512Pteropus_vampyrus
ENSTNIG00000012672snrpf9898.810ENSPNYG00000021712snrpf9998.810Pundamilia_nyererei
ENSTNIG00000012672snrpf9897.619ENSPNAG00000019117snrpf9997.619Pygocentrus_nattereri
ENSTNIG00000012672snrpf10096.512ENSRNOG00000005556Snrpf10096.512Rattus_norvegicus
ENSTNIG00000012672snrpf8793.333ENSRBIG00000030414-8793.333Rhinopithecus_bieti
ENSTNIG00000012672snrpf8793.333ENSRROG00000021975-8793.333Rhinopithecus_roxellana
ENSTNIG00000012672snrpf8161.972YPR182WSMX38361.972Saccharomyces_cerevisiae
ENSTNIG00000012672snrpf8781.333ENSSBOG00000032297-8681.333Saimiri_boliviensis_boliviensis
ENSTNIG00000012672snrpf10096.512ENSSBOG00000036179-10096.512Saimiri_boliviensis_boliviensis
ENSTNIG00000012672snrpf8796.000ENSSBOG00000012868-8796.000Saimiri_boliviensis_boliviensis
ENSTNIG00000012672snrpf9176.543ENSSBOG00000027638-9176.543Saimiri_boliviensis_boliviensis
ENSTNIG00000012672snrpf9996.471ENSSHAG00000012294SNRPF7796.471Sarcophilus_harrisii
ENSTNIG00000012672snrpf7498.438ENSSFOG00015021523snrpf9698.438Scleropages_formosus
ENSTNIG00000012672snrpf10096.512ENSSMAG00000005533snrpf9996.512Scophthalmus_maximus
ENSTNIG00000012672snrpf7698.462ENSSDUG00000016283snrpf7798.462Seriola_dumerili
ENSTNIG00000012672snrpf10097.674ENSSLDG00000005119snrpf10097.674Seriola_lalandi_dorsalis
ENSTNIG00000012672snrpf9371.250ENSSLDG00000003885-9074.324Seriola_lalandi_dorsalis
ENSTNIG00000012672snrpf9896.429ENSSPUG00000014590-9996.429Sphenodon_punctatus
ENSTNIG00000012672snrpf9998.824ENSSPAG00000003283snrpf9798.824Stegastes_partitus
ENSTNIG00000012672snrpf10096.512ENSSSCG00000000895SNRPF10096.512Sus_scrofa
ENSTNIG00000012672snrpf80100.000ENSTRUG00000014956snrpf100100.000Takifugu_rubripes
ENSTNIG00000012672snrpf8770.667ENSTTRG00000006070SNRPF8770.667Tursiops_truncatus
ENSTNIG00000012672snrpf10096.512ENSUAMG00000008176-10096.512Ursus_americanus
ENSTNIG00000012672snrpf10084.884ENSUAMG00000001101-8886.667Ursus_americanus
ENSTNIG00000012672snrpf8786.667ENSUMAG00000006177-8886.667Ursus_maritimus
ENSTNIG00000012672snrpf10096.512ENSUMAG00000003528-10096.512Ursus_maritimus
ENSTNIG00000012672snrpf10096.512ENSVPAG00000008712-10096.512Vicugna_pacos
ENSTNIG00000012672snrpf9188.462ENSVVUG00000023821-9688.000Vulpes_vulpes
ENSTNIG00000012672snrpf8672.368ENSXETG00000021630snrpf8772.368Xenopus_tropicalis
ENSTNIG00000012672snrpf9898.810ENSXCOG00000013860snrpf9798.810Xiphophorus_couchianus
ENSTNIG00000012672snrpf9898.810ENSXMAG00000015448snrpf9998.810Xiphophorus_maculatus

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