EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000012947 (Gene tree)
Gene ID: -
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair complementing defective repair in Chinese hamster cells 6
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3401 bases
Position: chr2:5463826-5467226
Accession: ZDB-GENE-030131-6420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000015927	SAP	PF02037.27	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016137	-	1785	-	ENSTNIP00000015927	594 (aa)	-	H3D5Y7

Gene Model

Click here to download ENSTNIG00000012947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000012947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000012947	xrcc6	99	56.949	ENSG00000196419	XRCC6	96	57.246	Homo_sapiens
ENSTNIG00000012947	xrcc6	99	78.814	ENSAPOG00000012704	xrcc6	96	78.814	Acanthochromis_polyacanthus
ENSTNIG00000012947	xrcc6	99	79.865	ENSACIG00000021277	xrcc6	96	79.865	Amphilophus_citrinellus
ENSTNIG00000012947	xrcc6	99	79.492	ENSAOCG00000021344	xrcc6	96	79.492	Amphiprion_ocellaris
ENSTNIG00000012947	xrcc6	99	79.153	ENSAPEG00000020712	xrcc6	96	79.153	Amphiprion_percula
ENSTNIG00000012947	xrcc6	99	80.169	ENSATEG00000007119	xrcc6	96	80.169	Anabas_testudineus
ENSTNIG00000012947	xrcc6	93	58.696	ENSAPLG00000004469	XRCC6	98	58.696	Anas_platyrhynchos
ENSTNIG00000012947	xrcc6	99	57.119	ENSANAG00000018684	XRCC6	98	57.401	Aotus_nancymaae
ENSTNIG00000012947	xrcc6	99	50.256	ENSANAG00000035230	-	96	50.635	Aotus_nancymaae
ENSTNIG00000012947	xrcc6	99	48.398	ENSANAG00000023445	-	95	50.679	Aotus_nancymaae
ENSTNIG00000012947	xrcc6	99	50.847	ENSANAG00000020017	-	90	58.252	Aotus_nancymaae
ENSTNIG00000012947	xrcc6	99	79.526	ENSACLG00000018608	xrcc6	96	79.526	Astatotilapia_calliptera
ENSTNIG00000012947	xrcc6	99	74.024	ENSAMXG00000007545	xrcc6	96	74.024	Astyanax_mexicanus
ENSTNIG00000012947	xrcc6	99	56.949	ENSCJAG00000045512	XRCC6	96	57.428	Callithrix_jacchus
ENSTNIG00000012947	xrcc6	99	55.763	ENSTSYG00000011348	XRCC6	97	56.295	Carlito_syrichta
ENSTNIG00000012947	xrcc6	98	46.599	ENSCCAG00000035711	-	96	46.112	Cebus_capucinus
ENSTNIG00000012947	xrcc6	99	47.627	ENSCCAG00000037663	-	93	47.627	Cebus_capucinus
ENSTNIG00000012947	xrcc6	92	59.031	ENSCCAG00000030468	-	96	59.031	Cebus_capucinus
ENSTNIG00000012947	xrcc6	99	53.390	ENSCCAG00000030041	-	90	53.390	Cebus_capucinus
ENSTNIG00000012947	xrcc6	99	56.830	ENSCATG00000042366	XRCC6	98	56.830	Cercocebus_atys
ENSTNIG00000012947	xrcc6	99	56.048	ENSCLAG00000016669	XRCC6	95	56.048	Chinchilla_lanigera
ENSTNIG00000012947	xrcc6	99	56.780	ENSCSAG00000005784	XRCC6	95	56.780	Chlorocebus_sabaeus
ENSTNIG00000012947	xrcc6	99	58.773	ENSCPBG00000020535	XRCC6	95	58.773	Chrysemys_picta_bellii
ENSTNIG00000012947	xrcc6	98	34.524	ENSCING00000000633	-	95	34.524	Ciona_intestinalis
ENSTNIG00000012947	xrcc6	99	56.780	ENSCANG00000031032	XRCC6	97	57.065	Colobus_angolensis_palliatus
ENSTNIG00000012947	xrcc6	99	53.130	ENSCGRG00001019029	Xrcc6	94	53.130	Cricetulus_griseus_chok1gshd
ENSTNIG00000012947	xrcc6	99	57.699	ENSCGRG00000001528	Xrcc6	95	57.699	Cricetulus_griseus_crigri
ENSTNIG00000012947	xrcc6	99	73.773	ENSCSEG00000020434	xrcc6	96	73.773	Cynoglossus_semilaevis
ENSTNIG00000012947	xrcc6	99	76.481	ENSCVAG00000002189	xrcc6	96	76.481	Cyprinodon_variegatus
ENSTNIG00000012947	xrcc6	99	71.356	ENSDARG00000071551	xrcc6	96	71.356	Danio_rerio
ENSTNIG00000012947	xrcc6	70	51.799	ENSETEG00000015333	-	67	51.799	Echinops_telfairi
ENSTNIG00000012947	xrcc6	98	55.178	ENSEASG00005001514	XRCC6	95	54.469	Equus_asinus_asinus
ENSTNIG00000012947	xrcc6	98	55.290	ENSECAG00000017563	XRCC6	99	54.754	Equus_caballus
ENSTNIG00000012947	xrcc6	100	69.865	ENSELUG00000020301	xrcc6	96	69.865	Esox_lucius
ENSTNIG00000012947	xrcc6	99	58.333	ENSFALG00000011908	XRCC6	92	58.037	Ficedula_albicollis
ENSTNIG00000012947	xrcc6	99	78.511	ENSFHEG00000016833	xrcc6	96	78.511	Fundulus_heteroclitus
ENSTNIG00000012947	xrcc6	99	64.020	ENSGMOG00000013524	xrcc6	95	64.020	Gadus_morhua
ENSTNIG00000012947	xrcc6	99	56.853	ENSGALG00000011932	XRCC6	94	56.853	Gallus_gallus
ENSTNIG00000012947	xrcc6	99	75.804	ENSGAFG00000008130	xrcc6	96	75.804	Gambusia_affinis
ENSTNIG00000012947	xrcc6	99	78.849	ENSGACG00000004868	xrcc6	95	78.849	Gasterosteus_aculeatus
ENSTNIG00000012947	xrcc6	99	58.262	ENSGAGG00000017518	XRCC6	95	58.262	Gopherus_agassizii
ENSTNIG00000012947	xrcc6	99	56.998	ENSGGOG00000015885	XRCC6	97	60.000	Gorilla_gorilla
ENSTNIG00000012947	xrcc6	96	79.545	ENSHBUG00000023281	xrcc6	100	79.545	Haplochromis_burtoni
ENSTNIG00000012947	xrcc6	99	55.026	ENSHGLG00000018078	XRCC6	95	55.026	Heterocephalus_glaber_female
ENSTNIG00000012947	xrcc6	99	55.026	ENSHGLG00100011264	XRCC6	95	55.026	Heterocephalus_glaber_male
ENSTNIG00000012947	xrcc6	99	73.773	ENSHCOG00000009821	xrcc6	96	73.773	Hippocampus_comes
ENSTNIG00000012947	xrcc6	99	71.138	ENSIPUG00000000767	xrcc6	96	71.138	Ictalurus_punctatus
ENSTNIG00000012947	xrcc6	99	57.022	ENSSTOG00000009490	XRCC6	95	57.022	Ictidomys_tridecemlineatus
ENSTNIG00000012947	xrcc6	98	50.594	ENSJJAG00000017136	Xrcc6	94	51.104	Jaculus_jaculus
ENSTNIG00000012947	xrcc6	99	78.305	ENSKMAG00000002141	xrcc6	96	78.305	Kryptolebias_marmoratus
ENSTNIG00000012947	xrcc6	99	78.098	ENSLBEG00000002691	xrcc6	95	78.098	Labrus_bergylta
ENSTNIG00000012947	xrcc6	84	71.000	ENSLOCG00000011533	xrcc6	94	71.000	Lepisosteus_oculatus
ENSTNIG00000012947	xrcc6	99	56.780	ENSMFAG00000003352	XRCC6	94	60.000	Macaca_fascicularis
ENSTNIG00000012947	xrcc6	99	56.780	ENSMMUG00000001856	XRCC6	96	57.065	Macaca_mulatta
ENSTNIG00000012947	xrcc6	99	56.780	ENSMNEG00000035076	XRCC6	98	56.937	Macaca_nemestrina
ENSTNIG00000012947	xrcc6	99	56.780	ENSMLEG00000019869	XRCC6	96	57.065	Mandrillus_leucophaeus
ENSTNIG00000012947	xrcc6	99	78.752	ENSMAMG00000003368	xrcc6	96	78.752	Mastacembelus_armatus
ENSTNIG00000012947	xrcc6	99	78.041	ENSMAMG00000003405	xrcc6	97	78.041	Mastacembelus_armatus
ENSTNIG00000012947	xrcc6	99	79.357	ENSMZEG00005028080	xrcc6	96	79.357	Maylandia_zebra
ENSTNIG00000012947	xrcc6	99	57.191	ENSMGAG00000012146	XRCC6	94	57.022	Meleagris_gallopavo
ENSTNIG00000012947	xrcc6	99	57.191	ENSMAUG00000017340	Xrcc6	95	57.191	Mesocricetus_auratus
ENSTNIG00000012947	xrcc6	99	55.668	ENSMOCG00000015717	Xrcc6	95	55.668	Microtus_ochrogaster
ENSTNIG00000012947	xrcc6	99	79.526	ENSMMOG00000003536	xrcc6	96	79.526	Mola_mola
ENSTNIG00000012947	xrcc6	99	79.019	ENSMALG00000013912	xrcc6	91	79.019	Monopterus_albus
ENSTNIG00000012947	xrcc6	99	53.469	MGP_CAROLIEiJ_G0020067	Xrcc6	95	53.469	Mus_caroli
ENSTNIG00000012947	xrcc6	99	57.530	ENSMUSG00000022471	Xrcc6	99	59.851	Mus_musculus
ENSTNIG00000012947	xrcc6	99	57.576	MGP_PahariEiJ_G0020069	Xrcc6	95	57.576	Mus_pahari
ENSTNIG00000012947	xrcc6	99	57.288	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.288	Mus_spretus
ENSTNIG00000012947	xrcc6	99	55.763	ENSNGAG00000013750	Xrcc6	95	55.763	Nannospalax_galili
ENSTNIG00000012947	xrcc6	99	79.695	ENSNBRG00000004125	xrcc6	96	79.695	Neolamprologus_brichardi
ENSTNIG00000012947	xrcc6	99	56.949	ENSOPRG00000002386	XRCC6	99	56.949	Ochotona_princeps
ENSTNIG00000012947	xrcc6	99	55.254	ENSODEG00000015847	XRCC6	95	55.254	Octodon_degus
ENSTNIG00000012947	xrcc6	99	79.526	ENSONIG00000019715	xrcc6	96	79.526	Oreochromis_niloticus
ENSTNIG00000012947	xrcc6	70	58.095	ENSOANG00000011328	XRCC6	98	58.095	Ornithorhynchus_anatinus
ENSTNIG00000012947	xrcc6	98	56.706	ENSOCUG00000006948	XRCC6	95	56.610	Oryctolagus_cuniculus
ENSTNIG00000012947	xrcc6	99	76.351	ENSORLG00020007820	xrcc6	96	76.351	Oryzias_latipes_hni
ENSTNIG00000012947	xrcc6	99	76.182	ENSORLG00015006406	xrcc6	96	76.182	Oryzias_latipes_hsok
ENSTNIG00000012947	xrcc6	99	76.988	ENSOMEG00000008998	xrcc6	96	76.858	Oryzias_melastigma
ENSTNIG00000012947	xrcc6	99	55.932	ENSOGAG00000008821	XRCC6	95	55.932	Otolemur_garnettii
ENSTNIG00000012947	xrcc6	99	53.846	ENSPPAG00000037167	XRCC6	96	54.198	Pan_paniscus
ENSTNIG00000012947	xrcc6	99	56.949	ENSPTRG00000022548	XRCC6	99	56.926	Pan_troglodytes
ENSTNIG00000012947	xrcc6	99	56.949	ENSPTRG00000045824	XRCC6	99	56.926	Pan_troglodytes
ENSTNIG00000012947	xrcc6	99	56.661	ENSPANG00000001252	XRCC6	97	61.207	Papio_anubis
ENSTNIG00000012947	xrcc6	99	68.644	ENSPKIG00000003974	xrcc6	96	68.644	Paramormyrops_kingsleyae
ENSTNIG00000012947	xrcc6	98	76.289	ENSPMGG00000014220	xrcc6	96	76.329	Periophthalmus_magnuspinnatus
ENSTNIG00000012947	xrcc6	99	56.610	ENSPEMG00000023446	Xrcc6	95	56.610	Peromyscus_maniculatus_bairdii
ENSTNIG00000012947	xrcc6	98	58.874	ENSPCIG00000026409	XRCC6	94	58.874	Phascolarctos_cinereus
ENSTNIG00000012947	xrcc6	99	77.327	ENSPFOG00000017173	xrcc6	96	77.327	Poecilia_formosa
ENSTNIG00000012947	xrcc6	99	77.157	ENSPLAG00000000562	xrcc6	96	77.157	Poecilia_latipinna
ENSTNIG00000012947	xrcc6	99	77.327	ENSPMEG00000018478	xrcc6	96	77.327	Poecilia_mexicana
ENSTNIG00000012947	xrcc6	99	77.234	ENSPREG00000020957	xrcc6	90	77.234	Poecilia_reticulata
ENSTNIG00000012947	xrcc6	89	61.111	ENSPPYG00000011876	XRCC6	94	61.111	Pongo_abelii
ENSTNIG00000012947	xrcc6	99	55.763	ENSPVAG00000001168	XRCC6	95	55.763	Pteropus_vampyrus
ENSTNIG00000012947	xrcc6	99	79.526	ENSPNYG00000003815	xrcc6	96	75.563	Pundamilia_nyererei
ENSTNIG00000012947	xrcc6	99	57.071	ENSRNOG00000006392	Xrcc6	95	56.566	Rattus_norvegicus
ENSTNIG00000012947	xrcc6	99	52.632	ENSRBIG00000039794	XRCC6	98	52.632	Rhinopithecus_bieti
ENSTNIG00000012947	xrcc6	99	56.780	ENSRROG00000030297	XRCC6	96	58.929	Rhinopithecus_roxellana
ENSTNIG00000012947	xrcc6	69	51.807	ENSSBOG00000024724	-	99	51.807	Saimiri_boliviensis_boliviensis
ENSTNIG00000012947	xrcc6	99	57.653	ENSSHAG00000010790	XRCC6	95	57.653	Sarcophilus_harrisii
ENSTNIG00000012947	xrcc6	99	69.779	ENSSFOG00015014409	xrcc6	96	69.779	Scleropages_formosus
ENSTNIG00000012947	xrcc6	99	79.188	ENSSMAG00000006496	xrcc6	96	79.188	Scophthalmus_maximus
ENSTNIG00000012947	xrcc6	99	78.173	ENSSDUG00000007542	xrcc6	96	78.173	Seriola_dumerili
ENSTNIG00000012947	xrcc6	99	77.496	ENSSLDG00000009974	xrcc6	96	77.496	Seriola_lalandi_dorsalis
ENSTNIG00000012947	xrcc6	98	58.191	ENSSPUG00000012086	XRCC6	94	58.191	Sphenodon_punctatus
ENSTNIG00000012947	xrcc6	99	78.680	ENSSPAG00000015199	xrcc6	96	78.680	Stegastes_partitus
ENSTNIG00000012947	xrcc6	99	57.699	ENSTGUG00000009852	-	95	57.699	Taeniopygia_guttata
ENSTNIG00000012947	xrcc6	99	84.237	ENSTRUG00000017070	xrcc6	96	84.237	Takifugu_rubripes
ENSTNIG00000012947	xrcc6	99	51.618	ENSTBEG00000011736	XRCC6	99	51.618	Tupaia_belangeri
ENSTNIG00000012947	xrcc6	88	53.925	ENSTTRG00000006749	XRCC6	86	54.082	Tursiops_truncatus
ENSTNIG00000012947	xrcc6	99	78.342	ENSXMAG00000009691	xrcc6	96	78.342	Xiphophorus_maculatus