EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000012977 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2158 bases
Position: chrUn_random:34423803-34425960
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000015956	zf-U11-48K	PF05253.12	5.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016167	-	1060	-	ENSTNIP00000015956	331 (aa)	-	H3D616

Gene Model

Click here to download ENSTNIG00000012977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000012977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000012977	-	72	46.721	ENSG00000168566	SNRNP48	76	45.385	Homo_sapiens
ENSTNIG00000012977	-	92	68.634	ENSAPOG00000021430	snrnp48	99	67.062	Acanthochromis_polyacanthus
ENSTNIG00000012977	-	75	46.850	ENSAMEG00000017349	SNRNP48	73	46.850	Ailuropoda_melanoleuca
ENSTNIG00000012977	-	91	64.013	ENSACIG00000002032	snrnp48	100	62.611	Amphilophus_citrinellus
ENSTNIG00000012977	-	92	67.081	ENSAOCG00000010562	snrnp48	99	65.579	Amphiprion_ocellaris
ENSTNIG00000012977	-	92	67.500	ENSAPEG00000003231	snrnp48	99	65.970	Amphiprion_percula
ENSTNIG00000012977	-	92	67.913	ENSATEG00000020210	snrnp48	98	66.970	Anabas_testudineus
ENSTNIG00000012977	-	77	44.565	ENSACAG00000002811	SNRNP48	63	49.515	Anolis_carolinensis
ENSTNIG00000012977	-	72	47.131	ENSANAG00000033538	SNRNP48	76	45.769	Aotus_nancymaae
ENSTNIG00000012977	-	92	50.155	ENSAMXG00000015309	snrnp48	99	48.936	Astyanax_mexicanus
ENSTNIG00000012977	-	71	47.934	ENSBTAG00000001123	SNRNP48	75	46.304	Bos_taurus
ENSTNIG00000012977	-	76	46.484	ENSCJAG00000021330	SNRNP48	75	46.667	Callithrix_jacchus
ENSTNIG00000012977	-	75	45.490	ENSCAFG00000009574	SNRNP48	62	45.490	Canis_familiaris
ENSTNIG00000012977	-	72	46.914	ENSCAFG00020013203	SNRNP48	74	45.490	Canis_lupus_dingo
ENSTNIG00000012977	-	71	47.934	ENSCHIG00000015216	SNRNP48	75	46.304	Capra_hircus
ENSTNIG00000012977	-	72	46.311	ENSTSYG00000000698	SNRNP48	71	46.914	Carlito_syrichta
ENSTNIG00000012977	-	83	42.208	ENSCAPG00000006768	SNRNP48	93	43.554	Cavia_aperea
ENSTNIG00000012977	-	94	40.643	ENSCPOG00000007910	SNRNP48	93	42.138	Cavia_porcellus
ENSTNIG00000012977	-	76	46.484	ENSCCAG00000035652	SNRNP48	75	46.667	Cebus_capucinus
ENSTNIG00000012977	-	72	46.914	ENSCATG00000033947	SNRNP48	76	45.385	Cercocebus_atys
ENSTNIG00000012977	-	76	46.875	ENSCLAG00000003765	SNRNP48	91	42.628	Chinchilla_lanigera
ENSTNIG00000012977	-	72	47.131	ENSCSAG00000007409	SNRNP48	76	45.769	Chlorocebus_sabaeus
ENSTNIG00000012977	-	81	44.484	ENSCPBG00000019146	SNRNP48	88	44.484	Chrysemys_picta_bellii
ENSTNIG00000012977	-	72	47.131	ENSCANG00000030017	SNRNP48	76	45.769	Colobus_angolensis_palliatus
ENSTNIG00000012977	-	76	45.312	ENSCGRG00001001076	-	75	45.490	Cricetulus_griseus_chok1gshd
ENSTNIG00000012977	-	82	38.869	ENSCGRG00001008805	-	88	39.007	Cricetulus_griseus_chok1gshd
ENSTNIG00000012977	-	76	45.312	ENSCGRG00000007781	Snrnp48	75	45.490	Cricetulus_griseus_crigri
ENSTNIG00000012977	-	72	71.548	ENSCSEG00000000722	snrnp48	94	62.651	Cynoglossus_semilaevis
ENSTNIG00000012977	-	90	67.089	ENSCVAG00000019829	snrnp48	88	63.663	Cyprinodon_variegatus
ENSTNIG00000012977	-	94	46.562	ENSDARG00000039989	snrnp48	96	46.951	Danio_rerio
ENSTNIG00000012977	-	72	46.774	ENSDNOG00000014978	SNRNP48	81	38.393	Dasypus_novemcinctus
ENSTNIG00000012977	-	88	42.765	ENSDORG00000015140	Snrnp48	91	41.987	Dipodomys_ordii
ENSTNIG00000012977	-	76	45.914	ENSEASG00005012021	SNRNP48	91	42.173	Equus_asinus_asinus
ENSTNIG00000012977	-	76	45.525	ENSECAG00000026937	SNRNP48	91	41.853	Equus_caballus
ENSTNIG00000012977	-	96	51.360	ENSELUG00000009766	snrnp48	97	50.857	Esox_lucius
ENSTNIG00000012977	-	72	47.131	ENSFCAG00000018853	SNRNP48	75	45.882	Felis_catus
ENSTNIG00000012977	-	72	52.083	ENSFALG00000007797	SNRNP48	92	47.987	Ficedula_albicollis
ENSTNIG00000012977	-	90	41.515	ENSFDAG00000009231	SNRNP48	91	42.949	Fukomys_damarensis
ENSTNIG00000012977	-	62	76.961	ENSFHEG00000014647	snrnp48	100	67.931	Fundulus_heteroclitus
ENSTNIG00000012977	-	88	57.862	ENSGMOG00000018599	-	99	57.321	Gadus_morhua
ENSTNIG00000012977	-	78	49.084	ENSGALG00000013005	SNRNP48	89	47.273	Gallus_gallus
ENSTNIG00000012977	-	85	67.616	ENSGAFG00000021639	snrnp48	98	64.583	Gambusia_affinis
ENSTNIG00000012977	-	76	73.200	ENSGACG00000017756	-	100	65.179	Gasterosteus_aculeatus
ENSTNIG00000012977	-	80	41.368	ENSGAGG00000000865	SNRNP48	67	49.758	Gopherus_agassizii
ENSTNIG00000012977	-	72	47.131	ENSGGOG00000013220	SNRNP48	76	45.769	Gorilla_gorilla
ENSTNIG00000012977	-	91	65.839	ENSHBUG00000017066	snrnp48	99	65.689	Haplochromis_burtoni
ENSTNIG00000012977	-	76	45.312	ENSHGLG00000015241	SNRNP48	91	41.346	Heterocephalus_glaber_female
ENSTNIG00000012977	-	76	45.312	ENSHGLG00100010027	SNRNP48	91	41.346	Heterocephalus_glaber_male
ENSTNIG00000012977	-	77	69.685	ENSHCOG00000014066	snrnp48	98	60.355	Hippocampus_comes
ENSTNIG00000012977	-	76	46.094	ENSSTOG00000014635	SNRNP48	91	42.308	Ictidomys_tridecemlineatus
ENSTNIG00000012977	-	71	47.934	ENSJJAG00000011495	Snrnp48	71	47.934	Jaculus_jaculus
ENSTNIG00000012977	-	92	65.944	ENSKMAG00000016514	snrnp48	97	65.663	Kryptolebias_marmoratus
ENSTNIG00000012977	-	84	70.609	ENSLBEG00000026249	snrnp48	99	67.456	Labrus_bergylta
ENSTNIG00000012977	-	92	46.319	ENSLACG00000003958	SNRNP48	95	46.012	Latimeria_chalumnae
ENSTNIG00000012977	-	86	53.846	ENSLOCG00000004187	snrnp48	96	51.534	Lepisosteus_oculatus
ENSTNIG00000012977	-	72	46.122	ENSLAFG00000011152	SNRNP48	71	46.311	Loxodonta_africana
ENSTNIG00000012977	-	72	47.131	ENSMFAG00000045216	SNRNP48	76	45.769	Macaca_fascicularis
ENSTNIG00000012977	-	72	47.131	ENSMMUG00000014785	SNRNP48	76	45.769	Macaca_mulatta
ENSTNIG00000012977	-	72	47.131	ENSMNEG00000042269	SNRNP48	76	45.769	Macaca_nemestrina
ENSTNIG00000012977	-	72	47.131	ENSMLEG00000034004	SNRNP48	76	45.769	Mandrillus_leucophaeus
ENSTNIG00000012977	-	92	66.352	ENSMAMG00000018673	snrnp48	86	65.060	Mastacembelus_armatus
ENSTNIG00000012977	-	74	47.405	ENSMGAG00000006037	SNRNP48	92	50.725	Meleagris_gallopavo
ENSTNIG00000012977	-	77	45.038	ENSMAUG00000011944	Snrnp48	77	45.038	Mesocricetus_auratus
ENSTNIG00000012977	-	94	37.427	ENSMICG00000012497	SNRNP48	98	39.403	Microcebus_murinus
ENSTNIG00000012977	-	76	47.082	ENSMOCG00000015555	Snrnp48	76	47.082	Microtus_ochrogaster
ENSTNIG00000012977	-	57	77.368	ENSMMOG00000003072	-	60	77.368	Mola_mola
ENSTNIG00000012977	-	85	42.123	ENSMODG00000009996	SNRNP48	88	40.909	Monodelphis_domestica
ENSTNIG00000012977	-	77	72.549	ENSMALG00000005725	snrnp48	99	64.688	Monopterus_albus
ENSTNIG00000012977	-	75	46.275	MGP_CAROLIEiJ_G0018441	Snrnp48	75	46.275	Mus_caroli
ENSTNIG00000012977	-	76	46.512	ENSMUSG00000021431	Snrnp48	76	46.512	Mus_musculus
ENSTNIG00000012977	-	75	46.667	MGP_PahariEiJ_G0019509	Snrnp48	75	46.667	Mus_pahari
ENSTNIG00000012977	-	75	46.275	MGP_SPRETEiJ_G0019321	Snrnp48	75	46.275	Mus_spretus
ENSTNIG00000012977	-	75	48.235	ENSNGAG00000004849	Snrnp48	75	48.235	Nannospalax_galili
ENSTNIG00000012977	-	91	65.528	ENSNBRG00000012127	snrnp48	96	67.069	Neolamprologus_brichardi
ENSTNIG00000012977	-	72	47.131	ENSNLEG00000011667	SNRNP48	76	45.769	Nomascus_leucogenys
ENSTNIG00000012977	-	75	46.614	ENSOPRG00000015471	SNRNP48	97	42.765	Ochotona_princeps
ENSTNIG00000012977	-	98	64.431	ENSONIG00000001520	snrnp48	99	65.982	Oreochromis_niloticus
ENSTNIG00000012977	-	54	32.836	ENSOANG00000019888	-	96	34.328	Ornithorhynchus_anatinus
ENSTNIG00000012977	-	71	47.718	ENSOCUG00000005168	SNRNP48	84	46.360	Oryctolagus_cuniculus
ENSTNIG00000012977	-	86	68.121	ENSORLG00000015654	snrnp48	93	68.634	Oryzias_latipes
ENSTNIG00000012977	-	86	67.114	ENSORLG00020015976	snrnp48	80	67.702	Oryzias_latipes_hni
ENSTNIG00000012977	-	86	67.114	ENSORLG00015022379	snrnp48	80	67.702	Oryzias_latipes_hsok
ENSTNIG00000012977	-	91	67.508	ENSOMEG00000022007	snrnp48	99	64.985	Oryzias_melastigma
ENSTNIG00000012977	-	75	44.922	ENSOGAG00000005275	SNRNP48	77	44.922	Otolemur_garnettii
ENSTNIG00000012977	-	60	52.475	ENSOARG00000017319	SNRNP48	69	52.475	Ovis_aries
ENSTNIG00000012977	-	72	47.131	ENSPPAG00000032873	SNRNP48	76	45.769	Pan_paniscus
ENSTNIG00000012977	-	72	46.914	ENSPPRG00000004283	SNRNP48	71	47.107	Panthera_pardus
ENSTNIG00000012977	-	60	50.746	ENSPTIG00000013502	SNRNP48	69	50.746	Panthera_tigris_altaica
ENSTNIG00000012977	-	72	47.131	ENSPTRG00000017703	SNRNP48	76	45.769	Pan_troglodytes
ENSTNIG00000012977	-	72	47.131	ENSPANG00000000771	SNRNP48	76	45.769	Papio_anubis
ENSTNIG00000012977	-	81	59.630	ENSPKIG00000013703	snrnp48	53	62.651	Paramormyrops_kingsleyae
ENSTNIG00000012977	-	74	43.056	ENSPSIG00000002213	SNRNP48	65	49.761	Pelodiscus_sinensis
ENSTNIG00000012977	-	77	60.618	ENSPMGG00000008120	snrnp48	92	60.618	Periophthalmus_magnuspinnatus
ENSTNIG00000012977	-	75	46.667	ENSPEMG00000008872	Snrnp48	75	46.667	Peromyscus_maniculatus_bairdii
ENSTNIG00000012977	-	82	69.597	ENSPFOG00000003578	snrnp48	98	65.774	Poecilia_formosa
ENSTNIG00000012977	-	72	71.429	ENSPLAG00000002290	snrnp48	82	71.429	Poecilia_latipinna
ENSTNIG00000012977	-	82	69.597	ENSPMEG00000018033	snrnp48	98	65.774	Poecilia_mexicana
ENSTNIG00000012977	-	83	69.455	ENSPREG00000018541	snrnp48	98	66.071	Poecilia_reticulata
ENSTNIG00000012977	-	72	47.131	ENSPPYG00000016209	SNRNP48	76	45.594	Pongo_abelii
ENSTNIG00000012977	-	71	36.327	ENSPCAG00000011991	SNRNP48	90	36.290	Procavia_capensis
ENSTNIG00000012977	-	74	45.020	ENSPVAG00000002854	SNRNP48	73	45.200	Pteropus_vampyrus
ENSTNIG00000012977	-	90	65.823	ENSPNYG00000015399	snrnp48	99	69.231	Pundamilia_nyererei
ENSTNIG00000012977	-	75	47.059	ENSRNOG00000013756	Snrnp48	75	47.059	Rattus_norvegicus
ENSTNIG00000012977	-	72	47.131	ENSRBIG00000043856	SNRNP48	77	47.131	Rhinopithecus_bieti
ENSTNIG00000012977	-	72	47.131	ENSRROG00000043229	SNRNP48	76	45.769	Rhinopithecus_roxellana
ENSTNIG00000012977	-	72	47.541	ENSSBOG00000019486	SNRNP48	76	46.154	Saimiri_boliviensis_boliviensis
ENSTNIG00000012977	-	84	43.902	ENSSHAG00000014483	SNRNP48	93	42.462	Sarcophilus_harrisii
ENSTNIG00000012977	-	75	58.498	ENSSFOG00015006610	snrnp48	60	58.893	Scleropages_formosus
ENSTNIG00000012977	-	86	67.785	ENSSDUG00000014953	snrnp48	99	65.875	Seriola_dumerili
ENSTNIG00000012977	-	86	67.785	ENSSLDG00000005989	snrnp48	99	65.875	Seriola_lalandi_dorsalis
ENSTNIG00000012977	-	78	44.485	ENSSPUG00000006257	SNRNP48	80	44.170	Sphenodon_punctatus
ENSTNIG00000012977	-	93	67.593	ENSSPAG00000006454	snrnp48	99	66.667	Stegastes_partitus
ENSTNIG00000012977	-	79	45.875	ENSTGUG00000007575	SNRNP48	94	45.875	Taeniopygia_guttata
ENSTNIG00000012977	-	92	77.044	ENSTRUG00000007031	snrnp48	99	74.474	Takifugu_rubripes
ENSTNIG00000012977	-	76	45.703	ENSTBEG00000015620	SNRNP48	75	45.703	Tupaia_belangeri
ENSTNIG00000012977	-	71	47.718	ENSTTRG00000016715	SNRNP48	71	47.541	Tursiops_truncatus
ENSTNIG00000012977	-	72	48.347	ENSUAMG00000003690	SNRNP48	75	46.850	Ursus_americanus
ENSTNIG00000012977	-	61	50.739	ENSVPAG00000003557	SNRNP48	69	50.990	Vicugna_pacos
ENSTNIG00000012977	-	72	46.914	ENSVVUG00000004996	SNRNP48	71	46.914	Vulpes_vulpes
ENSTNIG00000012977	-	89	42.424	ENSXETG00000020447	snrnp48	98	39.394	Xenopus_tropicalis
ENSTNIG00000012977	-	72	70.711	ENSXCOG00000004478	snrnp48	98	63.975	Xiphophorus_couchianus
ENSTNIG00000012977	-	82	69.231	ENSXMAG00000013595	snrnp48	98	65.476	Xiphophorus_maculatus