EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000013023 (Gene tree)
Gene ID: -
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 homolog%2C ribonucleoprotein
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2252 bases
Position: chr20:1709935-1712186
Accession: ZDB-GENE-040426-893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016002	Gar1	PF04410.14	5.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016213	-	1207	-	ENSTNIP00000016002	176 (aa)	-	H3D662

Gene Model

Click here to download ENSTNIG00000013023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013023's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013023	gar1	61	99.074	ENSAPOG00000019754	gar1	50	99.048	Acanthochromis_polyacanthus
ENSTNIG00000013023	gar1	61	92.523	ENSAMEG00000004605	GAR1	51	92.308	Ailuropoda_melanoleuca
ENSTNIG00000013023	gar1	95	96.471	ENSAOCG00000020947	gar1	79	96.471	Amphiprion_ocellaris
ENSTNIG00000013023	gar1	95	96.471	ENSAPEG00000001676	gar1	79	96.471	Amphiprion_percula
ENSTNIG00000013023	gar1	95	94.798	ENSATEG00000003733	gar1	81	94.798	Anabas_testudineus
ENSTNIG00000013023	gar1	90	89.286	ENSAPLG00000010926	GAR1	94	87.069	Anas_platyrhynchos
ENSTNIG00000013023	gar1	61	93.458	ENSBTAG00000000748	GAR1	50	93.269	Bos_taurus
ENSTNIG00000013023	gar1	59	93.269	ENSCAFG00020015566	GAR1	54	93.269	Canis_lupus_dingo
ENSTNIG00000013023	gar1	63	91.818	ENSCHIG00000016026	-	50	93.269	Capra_hircus
ENSTNIG00000013023	gar1	56	84.694	ENSCHIG00000011049	-	50	83.838	Capra_hircus
ENSTNIG00000013023	gar1	61	85.047	ENSTSYG00000026632	-	53	84.615	Carlito_syrichta
ENSTNIG00000013023	gar1	63	91.818	ENSCATG00000021854	GAR1	53	93.269	Cercocebus_atys
ENSTNIG00000013023	gar1	66	89.655	ENSCLAG00000005335	GAR1	81	86.154	Chinchilla_lanigera
ENSTNIG00000013023	gar1	61	91.589	ENSCSAG00000003922	GAR1	53	93.269	Chlorocebus_sabaeus
ENSTNIG00000013023	gar1	60	92.453	ENSCPBG00000004310	GAR1	52	93.204	Chrysemys_picta_bellii
ENSTNIG00000013023	gar1	56	71.429	ENSCING00000005744	-	59	64.407	Ciona_intestinalis
ENSTNIG00000013023	gar1	61	95.327	ENSCGRG00001003919	Gar1	53	88.889	Cricetulus_griseus_chok1gshd
ENSTNIG00000013023	gar1	60	94.495	ENSCGRG00000010165	-	85	94.495	Cricetulus_griseus_crigri
ENSTNIG00000013023	gar1	61	97.222	ENSCVAG00000002103	gar1	50	97.143	Cyprinodon_variegatus
ENSTNIG00000013023	gar1	66	91.453	ENSDNOG00000037632	GAR1	64	81.890	Dasypus_novemcinctus
ENSTNIG00000013023	gar1	66	90.517	ENSECAG00000013624	GAR1	59	88.889	Equus_caballus
ENSTNIG00000013023	gar1	61	93.458	ENSFCAG00000040791	-	50	93.269	Felis_catus
ENSTNIG00000013023	gar1	61	93.519	ENSGMOG00000012419	gar1	63	83.916	Gadus_morhua
ENSTNIG00000013023	gar1	64	90.179	ENSGALG00000020164	GAR1	53	87.931	Gallus_gallus
ENSTNIG00000013023	gar1	59	93.269	ENSGAGG00000004393	GAR1	53	93.204	Gopherus_agassizii
ENSTNIG00000013023	gar1	63	73.874	ENSGGOG00000036205	-	52	75.000	Gorilla_gorilla
ENSTNIG00000013023	gar1	64	97.321	ENSHBUG00000023860	gar1	57	97.321	Haplochromis_burtoni
ENSTNIG00000013023	gar1	61	94.393	ENSHGLG00000000493	GAR1	68	96.154	Heterocephalus_glaber_female
ENSTNIG00000013023	gar1	63	95.455	ENSIPUG00000003194	gar1	50	95.238	Ictalurus_punctatus
ENSTNIG00000013023	gar1	62	90.826	ENSSTOG00000005577	GAR1	68	94.231	Ictidomys_tridecemlineatus
ENSTNIG00000013023	gar1	63	96.396	ENSKMAG00000010402	gar1	50	97.143	Kryptolebias_marmoratus
ENSTNIG00000013023	gar1	61	98.148	ENSLBEG00000015647	gar1	63	92.571	Labrus_bergylta
ENSTNIG00000013023	gar1	60	88.679	ENSLACG00000003306	GAR1	62	89.320	Latimeria_chalumnae
ENSTNIG00000013023	gar1	61	80.556	ENSMFAG00000003572	-	51	79.808	Macaca_fascicularis
ENSTNIG00000013023	gar1	64	90.179	ENSMGAG00000011058	GAR1	51	87.931	Meleagris_gallopavo
ENSTNIG00000013023	gar1	61	95.327	ENSMAUG00000016788	Gar1	85	88.889	Mesocricetus_auratus
ENSTNIG00000013023	gar1	61	94.393	ENSMOCG00000001340	Gar1	84	83.333	Microtus_ochrogaster
ENSTNIG00000013023	gar1	61	96.262	ENSMMOG00000004156	gar1	51	95.238	Mola_mola
ENSTNIG00000013023	gar1	65	86.842	ENSMODG00000005897	GAR1	76	67.582	Monodelphis_domestica
ENSTNIG00000013023	gar1	61	94.393	MGP_CAROLIEiJ_G0025627	Gar1	82	84.615	Mus_caroli
ENSTNIG00000013023	gar1	63	92.727	ENSMUSG00000028010	Gar1	82	84.615	Mus_musculus
ENSTNIG00000013023	gar1	63	92.727	MGP_PahariEiJ_G0027076	Gar1	82	84.615	Mus_pahari
ENSTNIG00000013023	gar1	63	92.727	MGP_SPRETEiJ_G0026580	Gar1	82	84.615	Mus_spretus
ENSTNIG00000013023	gar1	61	93.458	ENSMPUG00000008615	GAR1	50	93.269	Mustela_putorius_furo
ENSTNIG00000013023	gar1	63	91.818	ENSNGAG00000008268	Gar1	68	94.231	Nannospalax_galili
ENSTNIG00000013023	gar1	63	77.477	ENSNLEG00000034282	-	52	77.885	Nomascus_leucogenys
ENSTNIG00000013023	gar1	64	91.150	ENSODEG00000011083	GAR1	60	88.034	Octodon_degus
ENSTNIG00000013023	gar1	60	92.453	ENSOANG00000003665	GAR1	69	73.856	Ornithorhynchus_anatinus
ENSTNIG00000013023	gar1	61	93.458	ENSPPAG00000014081	GAR1	52	93.269	Pan_paniscus
ENSTNIG00000013023	gar1	61	93.458	ENSPPRG00000023697	GAR1	50	93.269	Panthera_pardus
ENSTNIG00000013023	gar1	61	93.458	ENSPTIG00000021565	GAR1	50	93.269	Panthera_tigris_altaica
ENSTNIG00000013023	gar1	63	91.818	ENSPTRG00000016364	GAR1	53	93.269	Pan_troglodytes
ENSTNIG00000013023	gar1	60	92.453	ENSPSIG00000002970	GAR1	56	85.124	Pelodiscus_sinensis
ENSTNIG00000013023	gar1	61	95.327	ENSPEMG00000015838	Gar1	82	84.615	Peromyscus_maniculatus_bairdii
ENSTNIG00000013023	gar1	61	97.222	ENSPFOG00000024155	gar1	50	97.143	Poecilia_formosa
ENSTNIG00000013023	gar1	61	97.222	ENSPLAG00000015056	gar1	50	97.143	Poecilia_latipinna
ENSTNIG00000013023	gar1	61	98.148	ENSPMEG00000009320	gar1	50	98.095	Poecilia_mexicana
ENSTNIG00000013023	gar1	61	80.374	ENSPCAG00000015897	GAR1	66	66.443	Procavia_capensis
ENSTNIG00000013023	gar1	61	91.589	ENSPCOG00000027049	GAR1	53	93.269	Propithecus_coquereli
ENSTNIG00000013023	gar1	63	93.636	ENSPNAG00000019686	gar1	60	79.195	Pygocentrus_nattereri
ENSTNIG00000013023	gar1	61	95.370	ENSRNOG00000061146	Gar1	61	95.192	Rattus_norvegicus
ENSTNIG00000013023	gar1	64	76.786	ENSRBIG00000042411	-	50	76.923	Rhinopithecus_bieti
ENSTNIG00000013023	gar1	61	93.458	ENSRBIG00000019547	GAR1	53	93.269	Rhinopithecus_bieti
ENSTNIG00000013023	gar1	63	91.818	ENSRROG00000028454	GAR1	53	93.269	Rhinopithecus_roxellana
ENSTNIG00000013023	gar1	59	92.308	ENSSHAG00000002161	GAR1	69	67.702	Sarcophilus_harrisii
ENSTNIG00000013023	gar1	60	93.396	ENSSPUG00000008707	GAR1	58	93.204	Sphenodon_punctatus
ENSTNIG00000013023	gar1	98	93.220	ENSSPAG00000005974	gar1	78	93.220	Stegastes_partitus
ENSTNIG00000013023	gar1	63	91.818	ENSSSCG00000009137	GAR1	51	93.269	Sus_scrofa
ENSTNIG00000013023	gar1	56	92.929	ENSTGUG00000004185	GAR1	65	93.750	Taeniopygia_guttata
ENSTNIG00000013023	gar1	93	97.546	ENSTRUG00000020580	gar1	78	97.546	Takifugu_rubripes
ENSTNIG00000013023	gar1	59	93.269	ENSUAMG00000005652	GAR1	54	93.269	Ursus_americanus
ENSTNIG00000013023	gar1	61	93.458	ENSUMAG00000000776	GAR1	50	93.269	Ursus_maritimus
ENSTNIG00000013023	gar1	61	93.458	ENSVVUG00000017612	GAR1	54	93.269	Vulpes_vulpes