EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000013057 (Gene tree)
Gene ID: -
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin 1b
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 8885 bases
Position: chr20:2900426-2909310
Accession: ZDB-GENE-080723-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016038	Nucleoplasmin	PF03066.15	1.1e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016249	-	885	-	ENSTNIP00000016038	289 (aa)	-	H3D698

Gene Model

Click here to download ENSTNIG00000013057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013057's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000013057	npm1b	96	37.589	ENSTNIG00000010773	npm1a	96	39.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013057	npm1b	100	73.579	ENSAPOG00000004268	npm1b	99	73.579	Acanthochromis_polyacanthus
ENSTNIG00000013057	npm1b	100	74.832	ENSAOCG00000012549	npm1b	99	74.832	Amphiprion_ocellaris
ENSTNIG00000013057	npm1b	100	75.254	ENSAPEG00000000868	npm1b	99	75.254	Amphiprion_percula
ENSTNIG00000013057	npm1b	100	73.090	ENSATEG00000006254	npm1b	99	74.751	Anabas_testudineus
ENSTNIG00000013057	npm1b	96	40.550	ENSACAG00000015626	-	96	39.130	Anolis_carolinensis
ENSTNIG00000013057	npm1b	99	60.606	ENSAMXG00000042148	npm1b	99	59.596	Astyanax_mexicanus
ENSTNIG00000013057	npm1b	97	44.068	ENSCPBG00000021221	-	58	44.863	Chrysemys_picta_bellii
ENSTNIG00000013057	npm1b	100	72.000	ENSCSEG00000004530	npm1b	99	70.667	Cynoglossus_semilaevis
ENSTNIG00000013057	npm1b	100	69.435	ENSCVAG00000013016	npm1b	99	69.435	Cyprinodon_variegatus
ENSTNIG00000013057	npm1b	99	61.462	ENSDARG00000037675	npm1b	99	61.333	Danio_rerio
ENSTNIG00000013057	npm1b	99	58.553	ENSELUG00000022123	npm1b	99	58.361	Esox_lucius
ENSTNIG00000013057	npm1b	94	41.463	ENSFALG00000003320	-	94	42.807	Ficedula_albicollis
ENSTNIG00000013057	npm1b	100	67.327	ENSFHEG00000020794	npm1b	99	67.327	Fundulus_heteroclitus
ENSTNIG00000013057	npm1b	99	57.338	ENSGMOG00000002689	npm1b	100	57.679	Gadus_morhua
ENSTNIG00000013057	npm1b	99	41.060	ENSGALG00000002197	-	73	41.391	Gallus_gallus
ENSTNIG00000013057	npm1b	100	67.000	ENSGAFG00000017709	npm1b	99	68.667	Gambusia_affinis
ENSTNIG00000013057	npm1b	99	71.864	ENSGACG00000016706	npm1b	100	72.542	Gasterosteus_aculeatus
ENSTNIG00000013057	npm1b	96	43.686	ENSGAGG00000020250	-	96	44.027	Gopherus_agassizii
ENSTNIG00000013057	npm1b	100	68.106	ENSHBUG00000019903	npm1b	95	70.100	Haplochromis_burtoni
ENSTNIG00000013057	npm1b	100	65.217	ENSHCOG00000003895	npm1b	99	67.559	Hippocampus_comes
ENSTNIG00000013057	npm1b	99	55.629	ENSIPUG00000020165	npm1b	99	56.623	Ictalurus_punctatus
ENSTNIG00000013057	npm1b	99	71.959	ENSKMAG00000008260	npm1b	99	71.959	Kryptolebias_marmoratus
ENSTNIG00000013057	npm1b	94	40.594	ENSLACG00000001779	-	100	41.404	Latimeria_chalumnae
ENSTNIG00000013057	npm1b	96	35.690	ENSLACG00000013460	-	100	34.343	Latimeria_chalumnae
ENSTNIG00000013057	npm1b	93	44.147	ENSLOCG00000001942	npm1b	100	44.000	Lepisosteus_oculatus
ENSTNIG00000013057	npm1b	71	66.968	ENSMAMG00000015335	npm1b	99	67.421	Mastacembelus_armatus
ENSTNIG00000013057	npm1b	93	41.281	ENSMGAG00000001591	-	100	42.652	Meleagris_gallopavo
ENSTNIG00000013057	npm1b	81	70.902	ENSMALG00000015383	npm1b	99	72.541	Monopterus_albus
ENSTNIG00000013057	npm1b	99	66.102	ENSONIG00000001397	npm1b	98	69.072	Oreochromis_niloticus
ENSTNIG00000013057	npm1b	99	61.301	ENSOMEG00000003414	npm1b	100	60.351	Oryzias_melastigma
ENSTNIG00000013057	npm1b	99	56.494	ENSPKIG00000020050	npm1b	98	56.494	Paramormyrops_kingsleyae
ENSTNIG00000013057	npm1b	96	43.299	ENSPSIG00000011204	-	92	43.206	Pelodiscus_sinensis
ENSTNIG00000013057	npm1b	93	37.324	ENSPMAG00000004930	npm1b	99	37.324	Petromyzon_marinus
ENSTNIG00000013057	npm1b	100	68.439	ENSPFOG00000018357	npm1b	99	68.439	Poecilia_formosa
ENSTNIG00000013057	npm1b	99	62.585	ENSPNAG00000005498	npm1b	99	62.585	Pygocentrus_nattereri
ENSTNIG00000013057	npm1b	97	58.824	ENSSFOG00015005064	npm1b	98	58.824	Scleropages_formosus
ENSTNIG00000013057	npm1b	100	72.148	ENSSMAG00000008088	npm1b	99	72.148	Scophthalmus_maximus
ENSTNIG00000013057	npm1b	100	77.667	ENSSDUG00000007726	npm1b	99	77.333	Seriola_dumerili
ENSTNIG00000013057	npm1b	100	77.333	ENSSLDG00000021396	npm1b	99	77.000	Seriola_lalandi_dorsalis
ENSTNIG00000013057	npm1b	100	74.247	ENSSPAG00000011152	npm1b	99	74.247	Stegastes_partitus
ENSTNIG00000013057	npm1b	93	41.115	ENSTGUG00000014970	-	100	42.857	Taeniopygia_guttata
ENSTNIG00000013057	npm1b	100	85.085	ENSTRUG00000008105	npm1b	95	85.085	Takifugu_rubripes
ENSTNIG00000013057	npm1b	96	41.438	ENSXETG00000008403	npm1	95	41.781	Xenopus_tropicalis
ENSTNIG00000013057	npm1b	100	69.767	ENSXMAG00000001986	npm1b	99	69.767	Xiphophorus_maculatus