EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000013073 (Gene tree)
Gene ID: -
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4215 bases
Position: chr20:3493042-3497256
Accession: ZDB-GENE-030131-5546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016054	SRP72	PF08492.12	9.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016265	-	2019	-	ENSTNIP00000016054	672 (aa)	-	H3D6B4

Gene Model

Click here to download ENSTNIG00000013073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013073's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013073	srp72	97	77.252	ENSG00000174780	SRP72	99	77.347	Homo_sapiens
ENSTNIG00000013073	srp72	99	78.163	ENSAPOG00000019438	srp72	99	79.367	Acanthochromis_polyacanthus
ENSTNIG00000013073	srp72	96	77.795	ENSAMEG00000008469	SRP72	100	77.563	Ailuropoda_melanoleuca
ENSTNIG00000013073	srp72	99	89.851	ENSACIG00000000488	srp72	100	89.851	Amphilophus_citrinellus
ENSTNIG00000013073	srp72	99	89.222	ENSAOCG00000011256	srp72	100	90.419	Amphiprion_ocellaris
ENSTNIG00000013073	srp72	99	90.120	ENSAPEG00000001512	srp72	100	90.120	Amphiprion_percula
ENSTNIG00000013073	srp72	92	90.732	ENSATEG00000006781	srp72	99	90.732	Anabas_testudineus
ENSTNIG00000013073	srp72	98	76.737	ENSAPLG00000008751	SRP72	98	77.039	Anas_platyrhynchos
ENSTNIG00000013073	srp72	96	77.125	ENSACAG00000002381	SRP72	98	77.225	Anolis_carolinensis
ENSTNIG00000013073	srp72	95	77.394	ENSANAG00000020836	-	95	77.394	Aotus_nancymaae
ENSTNIG00000013073	srp72	99	90.569	ENSACLG00000014617	srp72	100	90.569	Astatotilapia_calliptera
ENSTNIG00000013073	srp72	97	83.028	ENSAMXG00000004011	srp72	100	82.960	Astyanax_mexicanus
ENSTNIG00000013073	srp72	97	76.794	ENSBTAG00000010593	SRP72	99	76.900	Bos_taurus
ENSTNIG00000013073	srp72	97	76.947	ENSCJAG00000017998	SRP72	99	77.049	Callithrix_jacchus
ENSTNIG00000013073	srp72	97	77.405	ENSCAFG00000002244	SRP72	99	77.496	Canis_familiaris
ENSTNIG00000013073	srp72	97	77.405	ENSCAFG00020027338	SRP72	98	78.082	Canis_lupus_dingo
ENSTNIG00000013073	srp72	97	75.152	ENSCHIG00000021465	SRP72	99	75.298	Capra_hircus
ENSTNIG00000013073	srp72	96	77.932	ENSTSYG00000010571	-	99	77.381	Carlito_syrichta
ENSTNIG00000013073	srp72	85	58.494	ENSCAPG00000016668	SRP72	100	69.767	Cavia_aperea
ENSTNIG00000013073	srp72	97	77.099	ENSCPOG00000000218	SRP72	99	77.198	Cavia_porcellus
ENSTNIG00000013073	srp72	95	77.358	ENSCCAG00000030683	-	95	77.358	Cebus_capucinus
ENSTNIG00000013073	srp72	96	75.655	ENSCCAG00000030830	-	99	75.789	Cebus_capucinus
ENSTNIG00000013073	srp72	97	61.905	ENSCATG00000045359	-	95	61.598	Cercocebus_atys
ENSTNIG00000013073	srp72	97	77.099	ENSCATG00000008072	SRP72	99	77.198	Cercocebus_atys
ENSTNIG00000013073	srp72	97	76.947	ENSCLAG00000003571	SRP72	99	77.049	Chinchilla_lanigera
ENSTNIG00000013073	srp72	97	72.866	ENSCSAG00000005079	SRP72	99	73.025	Chlorocebus_sabaeus
ENSTNIG00000013073	srp72	89	75.214	ENSCHOG00000013240	SRP72	90	75.214	Choloepus_hoffmanni
ENSTNIG00000013073	srp72	96	77.138	ENSCPBG00000015015	SRP72	100	76.453	Chrysemys_picta_bellii
ENSTNIG00000013073	srp72	95	40.422	ENSCING00000002417	-	98	40.351	Ciona_intestinalis
ENSTNIG00000013073	srp72	91	41.601	ENSCSAVG00000011288	-	97	41.518	Ciona_savignyi
ENSTNIG00000013073	srp72	99	53.695	ENSCANG00000037920	-	97	53.917	Colobus_angolensis_palliatus
ENSTNIG00000013073	srp72	97	77.099	ENSCANG00000041709	SRP72	99	77.198	Colobus_angolensis_palliatus
ENSTNIG00000013073	srp72	99	77.049	ENSCGRG00001013548	Srp72	99	77.049	Cricetulus_griseus_chok1gshd
ENSTNIG00000013073	srp72	94	77.638	ENSCGRG00000003013	Srp72	99	77.638	Cricetulus_griseus_crigri
ENSTNIG00000013073	srp72	97	87.846	ENSCSEG00000003616	srp72	100	87.874	Cynoglossus_semilaevis
ENSTNIG00000013073	srp72	91	89.327	ENSCVAG00000001520	srp72	100	89.327	Cyprinodon_variegatus
ENSTNIG00000013073	srp72	85	81.228	ENSDARG00000014139	srp72	99	81.313	Danio_rerio
ENSTNIG00000013073	srp72	97	72.769	ENSDNOG00000039012	SRP72	83	73.264	Dasypus_novemcinctus
ENSTNIG00000013073	srp72	96	77.554	ENSDORG00000000171	Srp72	99	77.395	Dipodomys_ordii
ENSTNIG00000013073	srp72	95	40.343	FBgn0038810	Srp72	96	40.343	Drosophila_melanogaster
ENSTNIG00000013073	srp72	96	77.329	ENSETEG00000005191	SRP72	99	77.246	Echinops_telfairi
ENSTNIG00000013073	srp72	73	64.490	ENSEBUG00000003696	srp72	97	64.490	Eptatretus_burgeri
ENSTNIG00000013073	srp72	97	77.099	ENSEASG00005017747	SRP72	99	77.198	Equus_asinus_asinus
ENSTNIG00000013073	srp72	96	77.504	ENSECAG00000006920	SRP72	99	77.594	Equus_caballus
ENSTNIG00000013073	srp72	99	82.318	ENSELUG00000022415	srp72	100	82.318	Esox_lucius
ENSTNIG00000013073	srp72	96	77.932	ENSFCAG00000027600	SRP72	99	78.045	Felis_catus
ENSTNIG00000013073	srp72	96	78.571	ENSFALG00000006713	SRP72	100	77.745	Ficedula_albicollis
ENSTNIG00000013073	srp72	96	77.042	ENSFDAG00000002014	-	99	77.143	Fukomys_damarensis
ENSTNIG00000013073	srp72	96	49.457	ENSFDAG00000009793	-	94	48.765	Fukomys_damarensis
ENSTNIG00000013073	srp72	100	88.856	ENSFHEG00000017652	srp72	93	89.599	Fundulus_heteroclitus
ENSTNIG00000013073	srp72	98	78.907	ENSGMOG00000005986	srp72	100	78.783	Gadus_morhua
ENSTNIG00000013073	srp72	96	78.383	ENSGALG00000011403	SRP72	99	78.281	Gallus_gallus
ENSTNIG00000013073	srp72	99	89.537	ENSGAFG00000017762	srp72	100	89.537	Gambusia_affinis
ENSTNIG00000013073	srp72	99	88.393	ENSGACG00000016749	srp72	100	88.393	Gasterosteus_aculeatus
ENSTNIG00000013073	srp72	86	77.470	ENSGAGG00000024611	SRP72	98	77.572	Gopherus_agassizii
ENSTNIG00000013073	srp72	97	76.947	ENSGGOG00000013234	-	99	77.049	Gorilla_gorilla
ENSTNIG00000013073	srp72	99	90.719	ENSHBUG00000020723	srp72	100	90.719	Haplochromis_burtoni
ENSTNIG00000013073	srp72	86	67.982	ENSHGLG00000003950	-	99	67.982	Heterocephalus_glaber_female
ENSTNIG00000013073	srp72	89	70.000	ENSHGLG00000010633	-	99	70.976	Heterocephalus_glaber_female
ENSTNIG00000013073	srp72	97	71.626	ENSHGLG00000005029	-	99	71.407	Heterocephalus_glaber_female
ENSTNIG00000013073	srp72	97	76.794	ENSHGLG00000009791	SRP72	99	76.900	Heterocephalus_glaber_female
ENSTNIG00000013073	srp72	52	60.231	ENSHGLG00000003496	-	99	60.345	Heterocephalus_glaber_female
ENSTNIG00000013073	srp72	96	60.896	ENSHGLG00000018597	-	99	61.295	Heterocephalus_glaber_female
ENSTNIG00000013073	srp72	97	76.794	ENSHGLG00100009021	SRP72	99	76.900	Heterocephalus_glaber_male
ENSTNIG00000013073	srp72	86	67.544	ENSHGLG00100017133	-	97	67.544	Heterocephalus_glaber_male
ENSTNIG00000013073	srp72	97	71.626	ENSHGLG00100011236	-	99	71.407	Heterocephalus_glaber_male
ENSTNIG00000013073	srp72	97	58.282	ENSHGLG00100009346	-	99	59.281	Heterocephalus_glaber_male
ENSTNIG00000013073	srp72	97	86.983	ENSHCOG00000013760	srp72	100	87.126	Hippocampus_comes
ENSTNIG00000013073	srp72	99	82.362	ENSIPUG00000000210	srp72	100	82.362	Ictalurus_punctatus
ENSTNIG00000013073	srp72	97	77.252	ENSSTOG00000007305	SRP72	99	77.347	Ictidomys_tridecemlineatus
ENSTNIG00000013073	srp72	96	77.605	ENSJJAG00000018324	Srp72	99	76.935	Jaculus_jaculus
ENSTNIG00000013073	srp72	99	89.387	ENSKMAG00000003776	srp72	100	89.387	Kryptolebias_marmoratus
ENSTNIG00000013073	srp72	97	81.402	ENSLOCG00000002628	srp72	98	81.241	Lepisosteus_oculatus
ENSTNIG00000013073	srp72	97	76.794	ENSLAFG00000018307	SRP72	99	76.900	Loxodonta_africana
ENSTNIG00000013073	srp72	97	77.099	ENSMFAG00000031065	SRP72	99	77.198	Macaca_fascicularis
ENSTNIG00000013073	srp72	97	62.826	ENSMFAG00000037164	-	96	63.256	Macaca_fascicularis
ENSTNIG00000013073	srp72	85	72.727	ENSMMUG00000021262	-	95	72.727	Macaca_mulatta
ENSTNIG00000013073	srp72	98	77.052	ENSMMUG00000016368	SRP72	98	77.052	Macaca_mulatta
ENSTNIG00000013073	srp72	97	77.099	ENSMNEG00000038065	-	99	77.198	Macaca_nemestrina
ENSTNIG00000013073	srp72	95	75.981	ENSMLEG00000030140	-	95	75.353	Mandrillus_leucophaeus
ENSTNIG00000013073	srp72	100	89.881	ENSMAMG00000014989	srp72	89	89.881	Mastacembelus_armatus
ENSTNIG00000013073	srp72	99	90.719	ENSMZEG00005003325	srp72	100	90.719	Maylandia_zebra
ENSTNIG00000013073	srp72	92	74.235	ENSMGAG00000008567	SRP72	100	78.038	Meleagris_gallopavo
ENSTNIG00000013073	srp72	98	77.121	ENSMAUG00000001237	Srp72	99	77.143	Mesocricetus_auratus
ENSTNIG00000013073	srp72	95	76.923	ENSMICG00000008507	-	95	76.923	Microcebus_murinus
ENSTNIG00000013073	srp72	99	76.751	ENSMOCG00000020309	Srp72	99	76.751	Microtus_ochrogaster
ENSTNIG00000013073	srp72	99	89.521	ENSMMOG00000002627	srp72	100	89.521	Mola_mola
ENSTNIG00000013073	srp72	96	74.495	ENSMODG00000020697	SRP72	99	74.586	Monodelphis_domestica
ENSTNIG00000013073	srp72	99	88.473	ENSMALG00000003747	srp72	100	88.907	Monopterus_albus
ENSTNIG00000013073	srp72	99	76.304	MGP_CAROLIEiJ_G0027323	Srp72	99	76.304	Mus_caroli
ENSTNIG00000013073	srp72	99	76.304	ENSMUSG00000036323	Srp72	99	76.304	Mus_musculus
ENSTNIG00000013073	srp72	99	77.259	MGP_PahariEiJ_G0017103	Srp72	99	77.293	Mus_pahari
ENSTNIG00000013073	srp72	99	76.304	MGP_SPRETEiJ_G0028317	Srp72	99	76.304	Mus_spretus
ENSTNIG00000013073	srp72	96	77.795	ENSMPUG00000004828	SRP72	99	77.895	Mustela_putorius_furo
ENSTNIG00000013073	srp72	96	77.209	ENSMLUG00000007344	SRP72	99	77.327	Myotis_lucifugus
ENSTNIG00000013073	srp72	99	77.496	ENSNGAG00000012595	Srp72	99	77.496	Nannospalax_galili
ENSTNIG00000013073	srp72	99	86.228	ENSNBRG00000014492	srp72	100	86.228	Neolamprologus_brichardi
ENSTNIG00000013073	srp72	97	72.018	ENSNLEG00000008806	-	99	72.131	Nomascus_leucogenys
ENSTNIG00000013073	srp72	96	67.496	ENSMEUG00000005164	SRP72	88	75.926	Notamacropus_eugenii
ENSTNIG00000013073	srp72	96	76.625	ENSOPRG00000012521	SRP72	99	76.261	Ochotona_princeps
ENSTNIG00000013073	srp72	96	75.621	ENSODEG00000012214	SRP72	99	75.789	Octodon_degus
ENSTNIG00000013073	srp72	100	90.476	ENSONIG00000001446	srp72	100	90.476	Oreochromis_niloticus
ENSTNIG00000013073	srp72	97	60.699	ENSOANG00000008562	SRP72	87	73.469	Ornithorhynchus_anatinus
ENSTNIG00000013073	srp72	97	77.370	ENSOCUG00000012226	SRP72	99	77.347	Oryctolagus_cuniculus
ENSTNIG00000013073	srp72	99	86.078	ENSORLG00000020418	srp72	99	86.976	Oryzias_latipes
ENSTNIG00000013073	srp72	99	85.629	ENSORLG00020009138	srp72	97	86.527	Oryzias_latipes_hni
ENSTNIG00000013073	srp72	99	85.928	ENSORLG00015018251	srp72	99	86.826	Oryzias_latipes_hsok
ENSTNIG00000013073	srp72	97	86.412	ENSOMEG00000022008	srp72	98	87.253	Oryzias_melastigma
ENSTNIG00000013073	srp72	97	78.015	ENSOGAG00000003578	SRP72	99	78.092	Otolemur_garnettii
ENSTNIG00000013073	srp72	97	76.641	ENSOARG00000004329	SRP72	99	76.751	Ovis_aries
ENSTNIG00000013073	srp72	98	55.152	ENSPPAG00000011428	-	95	55.420	Pan_paniscus
ENSTNIG00000013073	srp72	97	77.252	ENSPPAG00000042265	SRP72	99	77.347	Pan_paniscus
ENSTNIG00000013073	srp72	80	61.567	ENSPPAG00000032490	-	91	61.296	Pan_paniscus
ENSTNIG00000013073	srp72	96	77.950	ENSPPRG00000015991	SRP72	99	78.045	Panthera_pardus
ENSTNIG00000013073	srp72	96	77.950	ENSPTIG00000018786	SRP72	99	78.045	Panthera_tigris_altaica
ENSTNIG00000013073	srp72	98	56.970	ENSPTRG00000048100	-	95	57.252	Pan_troglodytes
ENSTNIG00000013073	srp72	80	61.381	ENSPTRG00000043609	-	93	60.360	Pan_troglodytes
ENSTNIG00000013073	srp72	97	77.252	ENSPTRG00000048466	-	99	77.347	Pan_troglodytes
ENSTNIG00000013073	srp72	97	77.099	ENSPANG00000005495	SRP72	99	77.198	Papio_anubis
ENSTNIG00000013073	srp72	94	62.362	ENSPANG00000030230	-	97	62.939	Papio_anubis
ENSTNIG00000013073	srp72	93	77.316	ENSPSIG00000003003	SRP72	100	77.414	Pelodiscus_sinensis
ENSTNIG00000013073	srp72	98	77.121	ENSPEMG00000012828	-	98	78.841	Peromyscus_maniculatus_bairdii
ENSTNIG00000013073	srp72	96	77.589	ENSPCIG00000000732	SRP72	98	77.594	Phascolarctos_cinereus
ENSTNIG00000013073	srp72	99	89.387	ENSPFOG00000003480	srp72	100	89.387	Poecilia_formosa
ENSTNIG00000013073	srp72	99	89.686	ENSPLAG00000020122	srp72	100	89.686	Poecilia_latipinna
ENSTNIG00000013073	srp72	99	89.238	ENSPMEG00000019988	srp72	100	89.238	Poecilia_mexicana
ENSTNIG00000013073	srp72	99	89.686	ENSPREG00000006218	srp72	100	89.686	Poecilia_reticulata
ENSTNIG00000013073	srp72	97	77.390	ENSPPYG00000014752	-	78	77.481	Pongo_abelii
ENSTNIG00000013073	srp72	57	65.013	ENSPPYG00000009152	-	97	64.524	Pongo_abelii
ENSTNIG00000013073	srp72	97	75.725	ENSPVAG00000005590	SRP72	99	75.857	Pteropus_vampyrus
ENSTNIG00000013073	srp72	99	90.569	ENSPNYG00000001916	srp72	100	90.569	Pundamilia_nyererei
ENSTNIG00000013073	srp72	99	84.006	ENSPNAG00000022424	srp72	100	84.006	Pygocentrus_nattereri
ENSTNIG00000013073	srp72	99	74.814	ENSRNOG00000002100	LOC108348180	99	75.410	Rattus_norvegicus
ENSTNIG00000013073	srp72	98	60.483	ENSRBIG00000029328	-	97	61.137	Rhinopithecus_bieti
ENSTNIG00000013073	srp72	97	72.171	ENSRBIG00000042069	SRP72	99	72.388	Rhinopithecus_bieti
ENSTNIG00000013073	srp72	97	77.099	ENSRROG00000035704	SRP72	99	77.198	Rhinopithecus_roxellana
ENSTNIG00000013073	srp72	92	77.617	ENSSHAG00000000614	SRP72	95	77.465	Sarcophilus_harrisii
ENSTNIG00000013073	srp72	99	82.063	ENSSFOG00015002026	srp72	100	82.063	Scleropages_formosus
ENSTNIG00000013073	srp72	99	87.630	ENSSMAG00000007639	srp72	100	88.376	Scophthalmus_maximus
ENSTNIG00000013073	srp72	100	91.369	ENSSDUG00000007345	srp72	98	91.416	Seriola_dumerili
ENSTNIG00000013073	srp72	100	91.369	ENSSLDG00000021819	srp72	98	91.369	Seriola_lalandi_dorsalis
ENSTNIG00000013073	srp72	74	76.378	ENSSARG00000005804	SRP72	76	76.574	Sorex_araneus
ENSTNIG00000013073	srp72	96	78.072	ENSSPUG00000009740	SRP72	98	77.238	Sphenodon_punctatus
ENSTNIG00000013073	srp72	99	91.317	ENSSPAG00000011565	srp72	100	91.317	Stegastes_partitus
ENSTNIG00000013073	srp72	99	75.301	ENSSSCG00000008900	SRP72	99	75.188	Sus_scrofa
ENSTNIG00000013073	srp72	96	78.450	ENSTGUG00000004767	SRP72	99	77.794	Taeniopygia_guttata
ENSTNIG00000013073	srp72	97	94.181	ENSTRUG00000009831	srp72	100	94.162	Takifugu_rubripes
ENSTNIG00000013073	srp72	88	64.957	ENSTBEG00000007394	SRP72	99	56.781	Tupaia_belangeri
ENSTNIG00000013073	srp72	92	76.575	ENSTTRG00000010945	SRP72	100	76.693	Tursiops_truncatus
ENSTNIG00000013073	srp72	57	79.319	ENSUAMG00000001701	SRP72	100	78.478	Ursus_americanus
ENSTNIG00000013073	srp72	96	77.640	ENSUMAG00000008151	SRP72	99	77.744	Ursus_maritimus
ENSTNIG00000013073	srp72	97	75.725	ENSVPAG00000000458	SRP72	99	75.857	Vicugna_pacos
ENSTNIG00000013073	srp72	97	77.252	ENSVVUG00000006020	SRP72	99	77.347	Vulpes_vulpes
ENSTNIG00000013073	srp72	94	73.940	ENSXETG00000010205	srp72	100	73.940	Xenopus_tropicalis
ENSTNIG00000013073	srp72	99	89.137	ENSXMAG00000018000	srp72	99	89.474	Xiphophorus_maculatus