EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000013100 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1935 bases
Position: chr17:1099777-1101711
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016081	FAM83	PF07894.12	2e-104	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016292	-	849	-	ENSTNIP00000016081	283 (aa)	-	H3D6E1

Gene Model

Click here to download ENSTNIG00000013100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013100's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000013100	-	78	32.609	ENSTNIG00000014784	-	88	32.609
ENSTNIG00000013100	-	62	38.418	ENSTNIG00000011260	fam83fa	58	38.418
ENSTNIG00000013100	-	94	37.184	ENSTNIG00000018819	fam83fb	70	37.184
ENSTNIG00000013100	-	91	38.636	ENSTNIG00000002833	fam83c	73	38.636
ENSTNIG00000013100	-	92	37.121	ENSTNIG00000007315	fam83d	98	37.121
ENSTNIG00000013100	-	93	46.970	ENSTNIG00000003270	-	95	46.970
ENSTNIG00000013100	-	83	33.755	ENSTNIG00000011604	-	92	33.755
ENSTNIG00000013100	-	98	32.203	ENSTNIG00000019077	FAM83A	93	32.660

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013100	-	99	78.947	ENSGMOG00000006438	-	95	78.947	Gadus_morhua
ENSTNIG00000013100	-	78	54.185	ENSGAGG00000004553	-	62	54.185	Gopherus_agassizii
ENSTNIG00000013100	-	90	82.879	ENSLBEG00000013410	-	51	82.308	Labrus_bergylta
ENSTNIG00000013100	-	100	60.069	ENSLAFG00000029225	FAM83H	64	60.069	Loxodonta_africana
ENSTNIG00000013100	-	86	56.746	ENSOANG00000000413	-	99	56.746	Ornithorhynchus_anatinus
ENSTNIG00000013100	-	91	42.545	ENSPMAG00000006570	-	88	43.273	Petromyzon_marinus