EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000013125 (Gene tree)
Gene ID: -
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1646 bases
Position: chr1:7167661-7169306
Accession: ZDB-GENE-030131-5306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016107	Clp1	PF06807.14	1.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016318	-	1311	-	ENSTNIP00000016107	436 (aa)	-	H3D6G7

Gene Model

Click here to download ENSTNIG00000013125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013125	clp1	98	76.581	ENSG00000172409	CLP1	99	76.581	Homo_sapiens
ENSTNIG00000013125	clp1	100	90.476	ENSAPOG00000008242	clp1	100	90.476	Acanthochromis_polyacanthus
ENSTNIG00000013125	clp1	98	76.112	ENSAMEG00000014551	CLP1	98	76.112	Ailuropoda_melanoleuca
ENSTNIG00000013125	clp1	100	90.930	ENSACIG00000006310	clp1	99	90.930	Amphilophus_citrinellus
ENSTNIG00000013125	clp1	100	90.930	ENSAOCG00000010681	clp1	100	90.930	Amphiprion_ocellaris
ENSTNIG00000013125	clp1	100	90.930	ENSAPEG00000012165	clp1	99	92.037	Amphiprion_percula
ENSTNIG00000013125	clp1	100	91.610	ENSATEG00000012374	clp1	100	91.610	Anabas_testudineus
ENSTNIG00000013125	clp1	98	76.168	ENSACAG00000007139	CLP1	99	76.168	Anolis_carolinensis
ENSTNIG00000013125	clp1	98	76.581	ENSANAG00000034935	CLP1	99	76.581	Aotus_nancymaae
ENSTNIG00000013125	clp1	100	91.610	ENSACLG00000013573	clp1	100	91.610	Astatotilapia_calliptera
ENSTNIG00000013125	clp1	95	85.613	ENSAMXG00000014194	clp1	98	85.613	Astyanax_mexicanus
ENSTNIG00000013125	clp1	98	76.112	ENSBTAG00000006493	CLP1	99	76.112	Bos_taurus
ENSTNIG00000013125	clp1	94	47.002	WBGene00010304	clpf-1	96	47.002	Caenorhabditis_elegans
ENSTNIG00000013125	clp1	98	76.581	ENSCJAG00000008748	CLP1	99	76.581	Callithrix_jacchus
ENSTNIG00000013125	clp1	98	76.112	ENSCAFG00000007815	CLP1	99	76.112	Canis_familiaris
ENSTNIG00000013125	clp1	98	76.112	ENSCAFG00020000903	CLP1	99	76.112	Canis_lupus_dingo
ENSTNIG00000013125	clp1	98	75.878	ENSCHIG00000023497	CLP1	99	75.878	Capra_hircus
ENSTNIG00000013125	clp1	98	76.347	ENSTSYG00000006824	CLP1	98	76.347	Carlito_syrichta
ENSTNIG00000013125	clp1	96	77.143	ENSCAPG00000009703	CLP1	98	77.143	Cavia_aperea
ENSTNIG00000013125	clp1	96	77.143	ENSCPOG00000012554	CLP1	99	77.143	Cavia_porcellus
ENSTNIG00000013125	clp1	96	77.143	ENSCCAG00000031957	CLP1	98	77.143	Cebus_capucinus
ENSTNIG00000013125	clp1	98	76.581	ENSCATG00000044628	CLP1	99	76.581	Cercocebus_atys
ENSTNIG00000013125	clp1	98	76.347	ENSCLAG00000004094	CLP1	99	76.347	Chinchilla_lanigera
ENSTNIG00000013125	clp1	98	76.581	ENSCSAG00000005994	CLP1	99	76.581	Chlorocebus_sabaeus
ENSTNIG00000013125	clp1	98	75.701	ENSCPBG00000016843	CLP1	99	75.701	Chrysemys_picta_bellii
ENSTNIG00000013125	clp1	96	62.919	ENSCING00000003779	-	96	62.919	Ciona_intestinalis
ENSTNIG00000013125	clp1	95	63.285	ENSCSAVG00000003437	-	96	63.285	Ciona_savignyi
ENSTNIG00000013125	clp1	98	76.581	ENSCANG00000034335	CLP1	99	76.581	Colobus_angolensis_palliatus
ENSTNIG00000013125	clp1	98	75.701	ENSCGRG00001002227	CLP1	99	75.701	Cricetulus_griseus_chok1gshd
ENSTNIG00000013125	clp1	98	75.701	ENSCGRG00000004328	CLP1	99	75.701	Cricetulus_griseus_crigri
ENSTNIG00000013125	clp1	100	87.528	ENSCSEG00000008614	clp1	100	87.528	Cynoglossus_semilaevis
ENSTNIG00000013125	clp1	100	89.796	ENSCVAG00000020101	clp1	100	89.796	Cyprinodon_variegatus
ENSTNIG00000013125	clp1	95	85.071	ENSDARG00000063663	clp1	96	84.346	Danio_rerio
ENSTNIG00000013125	clp1	98	76.047	ENSDNOG00000042415	CLP1	90	76.047	Dasypus_novemcinctus
ENSTNIG00000013125	clp1	98	75.878	ENSDORG00000014685	Clp1	99	75.878	Dipodomys_ordii
ENSTNIG00000013125	clp1	94	54.348	FBgn0033842	cbc	97	54.348	Drosophila_melanogaster
ENSTNIG00000013125	clp1	98	76.347	ENSETEG00000003009	CLP1	99	76.347	Echinops_telfairi
ENSTNIG00000013125	clp1	97	65.105	ENSEBUG00000011648	clp1	99	65.105	Eptatretus_burgeri
ENSTNIG00000013125	clp1	98	76.581	ENSEASG00005002093	CLP1	99	76.581	Equus_asinus_asinus
ENSTNIG00000013125	clp1	98	76.581	ENSECAG00000011597	CLP1	99	76.581	Equus_caballus
ENSTNIG00000013125	clp1	99	75.058	ENSEEUG00000012771	CLP1	99	75.058	Erinaceus_europaeus
ENSTNIG00000013125	clp1	95	88.208	ENSELUG00000024048	clp1	100	85.426	Esox_lucius
ENSTNIG00000013125	clp1	98	76.112	ENSFCAG00000006633	CLP1	99	76.112	Felis_catus
ENSTNIG00000013125	clp1	98	75.935	ENSFALG00000011145	CLP1	99	75.935	Ficedula_albicollis
ENSTNIG00000013125	clp1	98	76.347	ENSFDAG00000000234	CLP1	99	76.347	Fukomys_damarensis
ENSTNIG00000013125	clp1	100	90.249	ENSFHEG00000014760	CLP1	100	90.249	Fundulus_heteroclitus
ENSTNIG00000013125	clp1	100	85.941	ENSGMOG00000019340	clp1	100	85.941	Gadus_morhua
ENSTNIG00000013125	clp1	98	76.168	ENSGALG00000007370	CLP1	99	76.168	Gallus_gallus
ENSTNIG00000013125	clp1	100	90.930	ENSGAFG00000003020	clp1	100	90.930	Gambusia_affinis
ENSTNIG00000013125	clp1	100	90.249	ENSGACG00000017832	clp1	100	90.249	Gasterosteus_aculeatus
ENSTNIG00000013125	clp1	98	75.701	ENSGAGG00000013279	CLP1	99	75.701	Gopherus_agassizii
ENSTNIG00000013125	clp1	98	76.581	ENSGGOG00000023006	CLP1	99	76.581	Gorilla_gorilla
ENSTNIG00000013125	clp1	100	91.837	ENSHBUG00000010436	clp1	100	91.837	Haplochromis_burtoni
ENSTNIG00000013125	clp1	98	76.347	ENSHGLG00000009914	CLP1	99	76.347	Heterocephalus_glaber_female
ENSTNIG00000013125	clp1	98	76.347	ENSHGLG00100006105	CLP1	99	76.347	Heterocephalus_glaber_male
ENSTNIG00000013125	clp1	100	90.703	ENSHCOG00000010072	clp1	100	90.703	Hippocampus_comes
ENSTNIG00000013125	clp1	95	84.397	ENSIPUG00000016238	clp1	99	81.069	Ictalurus_punctatus
ENSTNIG00000013125	clp1	98	76.347	ENSSTOG00000029257	CLP1	99	76.347	Ictidomys_tridecemlineatus
ENSTNIG00000013125	clp1	98	75.878	ENSJJAG00000023691	Clp1	99	75.878	Jaculus_jaculus
ENSTNIG00000013125	clp1	100	90.476	ENSKMAG00000011990	clp1	100	90.476	Kryptolebias_marmoratus
ENSTNIG00000013125	clp1	100	91.837	ENSLBEG00000010201	clp1	100	91.837	Labrus_bergylta
ENSTNIG00000013125	clp1	96	75.714	ENSLACG00000003160	CLP1	98	75.714	Latimeria_chalumnae
ENSTNIG00000013125	clp1	71	86.025	ENSLOCG00000008074	clp1	100	86.335	Lepisosteus_oculatus
ENSTNIG00000013125	clp1	98	76.112	ENSLAFG00000014907	CLP1	99	76.112	Loxodonta_africana
ENSTNIG00000013125	clp1	98	76.581	ENSMFAG00000046074	CLP1	99	76.581	Macaca_fascicularis
ENSTNIG00000013125	clp1	98	76.581	ENSMMUG00000038007	CLP1	98	76.581	Macaca_mulatta
ENSTNIG00000013125	clp1	98	76.581	ENSMNEG00000000259	CLP1	99	76.581	Macaca_nemestrina
ENSTNIG00000013125	clp1	98	76.581	ENSMLEG00000043556	CLP1	99	76.581	Mandrillus_leucophaeus
ENSTNIG00000013125	clp1	100	92.517	ENSMAMG00000002149	clp1	100	92.517	Mastacembelus_armatus
ENSTNIG00000013125	clp1	100	91.610	ENSMZEG00005002850	clp1	100	91.610	Maylandia_zebra
ENSTNIG00000013125	clp1	98	76.168	ENSMGAG00000009643	CLP1	99	76.168	Meleagris_gallopavo
ENSTNIG00000013125	clp1	98	75.701	ENSMAUG00000016261	Clp1	99	75.701	Mesocricetus_auratus
ENSTNIG00000013125	clp1	98	76.112	ENSMICG00000004895	CLP1	99	76.112	Microcebus_murinus
ENSTNIG00000013125	clp1	98	75.935	ENSMOCG00000005498	Clp1	99	75.935	Microtus_ochrogaster
ENSTNIG00000013125	clp1	100	91.837	ENSMMOG00000003229	clp1	100	91.837	Mola_mola
ENSTNIG00000013125	clp1	98	75.935	ENSMODG00000024148	-	99	75.935	Monodelphis_domestica
ENSTNIG00000013125	clp1	98	75.935	ENSMODG00000020107	-	99	75.935	Monodelphis_domestica
ENSTNIG00000013125	clp1	100	90.930	ENSMALG00000014239	clp1	100	90.930	Monopterus_albus
ENSTNIG00000013125	clp1	98	75.701	MGP_CAROLIEiJ_G0023726	Clp1	99	75.701	Mus_caroli
ENSTNIG00000013125	clp1	98	75.701	ENSMUSG00000027079	Clp1	99	75.701	Mus_musculus
ENSTNIG00000013125	clp1	98	75.467	MGP_PahariEiJ_G0025177	Clp1	99	75.467	Mus_pahari
ENSTNIG00000013125	clp1	98	75.701	MGP_SPRETEiJ_G0024646	Clp1	99	75.701	Mus_spretus
ENSTNIG00000013125	clp1	98	76.112	ENSMPUG00000000268	CLP1	99	76.112	Mustela_putorius_furo
ENSTNIG00000013125	clp1	96	76.905	ENSMLUG00000007904	CLP1	98	76.905	Myotis_lucifugus
ENSTNIG00000013125	clp1	98	75.878	ENSNGAG00000006165	Clp1	99	75.878	Nannospalax_galili
ENSTNIG00000013125	clp1	100	91.156	ENSNBRG00000005225	clp1	100	91.156	Neolamprologus_brichardi
ENSTNIG00000013125	clp1	80	71.825	ENSNLEG00000012809	-	99	71.825	Nomascus_leucogenys
ENSTNIG00000013125	clp1	98	75.935	ENSMEUG00000010949	CLP1	99	75.935	Notamacropus_eugenii
ENSTNIG00000013125	clp1	68	78.930	ENSOPRG00000007329	CLP1	100	78.930	Ochotona_princeps
ENSTNIG00000013125	clp1	98	76.347	ENSODEG00000011410	CLP1	99	76.347	Octodon_degus
ENSTNIG00000013125	clp1	100	91.156	ENSONIG00000005089	clp1	100	91.156	Oreochromis_niloticus
ENSTNIG00000013125	clp1	96	77.143	ENSOCUG00000007045	CLP1	98	77.143	Oryctolagus_cuniculus
ENSTNIG00000013125	clp1	100	88.209	ENSORLG00000003647	clp1	100	88.209	Oryzias_latipes
ENSTNIG00000013125	clp1	100	87.982	ENSORLG00020016676	clp1	100	87.982	Oryzias_latipes_hni
ENSTNIG00000013125	clp1	100	88.209	ENSORLG00015019484	clp1	100	88.209	Oryzias_latipes_hsok
ENSTNIG00000013125	clp1	100	88.435	ENSOMEG00000021303	clp1	100	88.435	Oryzias_melastigma
ENSTNIG00000013125	clp1	98	76.112	ENSOGAG00000004508	CLP1	99	76.112	Otolemur_garnettii
ENSTNIG00000013125	clp1	98	74.941	ENSOARG00000010145	CLP1	98	74.941	Ovis_aries
ENSTNIG00000013125	clp1	98	76.581	ENSPPAG00000041519	CLP1	99	76.581	Pan_paniscus
ENSTNIG00000013125	clp1	98	76.112	ENSPPRG00000006135	CLP1	99	76.112	Panthera_pardus
ENSTNIG00000013125	clp1	98	76.112	ENSPTIG00000015866	CLP1	99	76.112	Panthera_tigris_altaica
ENSTNIG00000013125	clp1	98	76.581	ENSPTRG00000047318	CLP1	99	76.581	Pan_troglodytes
ENSTNIG00000013125	clp1	98	76.581	ENSPANG00000017078	CLP1	97	76.581	Papio_anubis
ENSTNIG00000013125	clp1	100	84.545	ENSPKIG00000007697	clp1	100	84.545	Paramormyrops_kingsleyae
ENSTNIG00000013125	clp1	93	72.840	ENSPSIG00000005468	CLP1	99	72.840	Pelodiscus_sinensis
ENSTNIG00000013125	clp1	100	89.569	ENSPMGG00000012171	clp1	100	89.569	Periophthalmus_magnuspinnatus
ENSTNIG00000013125	clp1	98	75.935	ENSPEMG00000011213	-	99	75.935	Peromyscus_maniculatus_bairdii
ENSTNIG00000013125	clp1	95	68.106	ENSPMAG00000006707	clp1	97	68.106	Petromyzon_marinus
ENSTNIG00000013125	clp1	98	76.168	ENSPCIG00000011899	CLP1	99	76.168	Phascolarctos_cinereus
ENSTNIG00000013125	clp1	100	90.476	ENSPFOG00000008169	clp1	100	90.476	Poecilia_formosa
ENSTNIG00000013125	clp1	100	90.476	ENSPLAG00000022388	clp1	100	90.476	Poecilia_latipinna
ENSTNIG00000013125	clp1	100	90.476	ENSPMEG00000021088	clp1	100	90.476	Poecilia_mexicana
ENSTNIG00000013125	clp1	100	90.476	ENSPREG00000017802	clp1	100	90.476	Poecilia_reticulata
ENSTNIG00000013125	clp1	51	76.444	ENSPPYG00000003266	-	100	76.444	Pongo_abelii
ENSTNIG00000013125	clp1	98	76.112	ENSPCOG00000000360	CLP1	98	76.112	Propithecus_coquereli
ENSTNIG00000013125	clp1	98	76.112	ENSPVAG00000016270	CLP1	99	76.112	Pteropus_vampyrus
ENSTNIG00000013125	clp1	100	91.837	ENSPNYG00000017274	clp1	99	91.837	Pundamilia_nyererei
ENSTNIG00000013125	clp1	100	81.696	ENSPNAG00000026460	clp1	100	82.366	Pygocentrus_nattereri
ENSTNIG00000013125	clp1	98	75.701	ENSRNOG00000007416	Clp1	99	75.701	Rattus_norvegicus
ENSTNIG00000013125	clp1	98	76.581	ENSRBIG00000018191	CLP1	99	76.581	Rhinopithecus_bieti
ENSTNIG00000013125	clp1	98	76.581	ENSRROG00000039265	CLP1	99	76.581	Rhinopithecus_roxellana
ENSTNIG00000013125	clp1	94	63.814	ENSSBOG00000010558	-	93	63.814	Saimiri_boliviensis_boliviensis
ENSTNIG00000013125	clp1	98	76.581	ENSSBOG00000032517	-	99	76.581	Saimiri_boliviensis_boliviensis
ENSTNIG00000013125	clp1	98	76.168	ENSSHAG00000015695	CLP1	99	76.168	Sarcophilus_harrisii
ENSTNIG00000013125	clp1	100	82.561	ENSSFOG00015000628	clp1	100	83.223	Scleropages_formosus
ENSTNIG00000013125	clp1	100	90.703	ENSSMAG00000019423	clp1	99	90.703	Scophthalmus_maximus
ENSTNIG00000013125	clp1	100	91.610	ENSSDUG00000014495	clp1	100	91.610	Seriola_dumerili
ENSTNIG00000013125	clp1	100	91.383	ENSSLDG00000000937	clp1	100	91.383	Seriola_lalandi_dorsalis
ENSTNIG00000013125	clp1	51	75.893	ENSSARG00000002459	CLP1	100	75.893	Sorex_araneus
ENSTNIG00000013125	clp1	98	75.467	ENSSPUG00000016811	CLP1	99	75.467	Sphenodon_punctatus
ENSTNIG00000013125	clp1	100	90.703	ENSSPAG00000016052	clp1	100	90.703	Stegastes_partitus
ENSTNIG00000013125	clp1	98	76.112	ENSSSCG00000031442	CLP1	99	76.112	Sus_scrofa
ENSTNIG00000013125	clp1	98	75.701	ENSTGUG00000007002	CLP1	99	75.701	Taeniopygia_guttata
ENSTNIG00000013125	clp1	100	97.936	ENSTRUG00000012602	clp1	100	97.936	Takifugu_rubripes
ENSTNIG00000013125	clp1	98	75.644	ENSTBEG00000009975	CLP1	99	75.644	Tupaia_belangeri
ENSTNIG00000013125	clp1	98	75.878	ENSTTRG00000002096	CLP1	99	75.878	Tursiops_truncatus
ENSTNIG00000013125	clp1	98	76.112	ENSUAMG00000011388	CLP1	99	76.112	Ursus_americanus
ENSTNIG00000013125	clp1	98	76.112	ENSUMAG00000018317	CLP1	99	76.112	Ursus_maritimus
ENSTNIG00000013125	clp1	98	76.112	ENSVVUG00000017138	CLP1	96	76.112	Vulpes_vulpes
ENSTNIG00000013125	clp1	100	70.522	ENSXETG00000007088	clp1	100	70.975	Xenopus_tropicalis
ENSTNIG00000013125	clp1	100	90.703	ENSXCOG00000002287	clp1	100	90.703	Xiphophorus_couchianus
ENSTNIG00000013125	clp1	100	90.703	ENSXMAG00000009783	clp1	100	90.703	Xiphophorus_maculatus