EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000013151 (Gene tree)
Gene ID: -
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: polymerase (RNA) III (DNA directed) polypeptide A
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 14111 bases
Position: chr2_random:988794-1002904
Accession: ZDB-GENE-050208-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016133	RNA_pol_Rpb1_5	PF04998.17	1.1e-88	1	1
ENSTNIP00000016133	RNA_pol_Rpb1_4	PF05000.17	4.8e-32	1	1
ENSTNIP00000016133	RNA_pol_Rpb1_2	PF00623.20	1.7e-73	1	1
ENSTNIP00000016133	RNA_pol_Rpb1_3	PF04983.18	7.1e-41	1	1
ENSTNIP00000016133	RNA_pol_Rpb1_1	PF04997.12	3.4e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016344	-	4176	-	ENSTNIP00000016133	1391 (aa)	-	H3D6J3

Gene Model

Click here to download ENSTNIG00000013151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013151's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000013151	polr3a	91	38.639	ENSTNIG00000010136	polr2a	75	38.639
ENSTNIG00000013151	polr3a	65	32.690	ENSTNIG00000010116	polr1a	58	32.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013151	polr3a	100	89.727	ENSG00000148606	POLR3A	98	93.038	Homo_sapiens
ENSTNIG00000013151	polr3a	62	91.657	ENSAPOG00000022727	polr3a	99	91.657	Acanthochromis_polyacanthus
ENSTNIG00000013151	polr3a	100	89.749	ENSAMEG00000017801	POLR3A	100	89.749	Ailuropoda_melanoleuca
ENSTNIG00000013151	polr3a	94	95.315	ENSACIG00000024504	polr3a	97	95.315	Amphilophus_citrinellus
ENSTNIG00000013151	polr3a	100	92.026	ENSAOCG00000003949	-	100	92.026	Amphiprion_ocellaris
ENSTNIG00000013151	polr3a	100	95.402	ENSAOCG00000002071	polr3a	100	95.402	Amphiprion_ocellaris
ENSTNIG00000013151	polr3a	100	95.402	ENSAPEG00000013351	polr3a	100	95.405	Amphiprion_percula
ENSTNIG00000013151	polr3a	100	95.259	ENSAPEG00000001966	-	100	95.259	Amphiprion_percula
ENSTNIG00000013151	polr3a	100	95.474	ENSATEG00000023277	polr3a	100	95.474	Anabas_testudineus
ENSTNIG00000013151	polr3a	99	90.051	ENSAPLG00000015878	POLR3A	99	90.051	Anas_platyrhynchos
ENSTNIG00000013151	polr3a	93	88.863	ENSACAG00000007985	POLR3A	99	88.863	Anolis_carolinensis
ENSTNIG00000013151	polr3a	100	87.088	ENSANAG00000028922	POLR3A	96	93.631	Aotus_nancymaae
ENSTNIG00000013151	polr3a	100	95.259	ENSACLG00000005914	polr3a	100	95.259	Astatotilapia_calliptera
ENSTNIG00000013151	polr3a	99	88.345	ENSAMXG00000018852	polr3a	99	88.345	Astyanax_mexicanus
ENSTNIG00000013151	polr3a	100	89.655	ENSBTAG00000013259	POLR3A	100	89.655	Bos_taurus
ENSTNIG00000013151	polr3a	98	56.846	WBGene00004411	rpc-1	99	56.846	Caenorhabditis_elegans
ENSTNIG00000013151	polr3a	100	89.511	ENSCJAG00000001015	POLR3A	100	89.511	Callithrix_jacchus
ENSTNIG00000013151	polr3a	100	89.943	ENSCAFG00000015546	POLR3A	100	89.943	Canis_familiaris
ENSTNIG00000013151	polr3a	100	89.943	ENSCAFG00020014711	POLR3A	100	89.943	Canis_lupus_dingo
ENSTNIG00000013151	polr3a	100	89.368	ENSCHIG00000000352	POLR3A	100	89.368	Capra_hircus
ENSTNIG00000013151	polr3a	100	89.224	ENSTSYG00000006671	POLR3A	100	89.224	Carlito_syrichta
ENSTNIG00000013151	polr3a	99	89.252	ENSCAPG00000016031	POLR3A	100	89.252	Cavia_aperea
ENSTNIG00000013151	polr3a	100	89.224	ENSCPOG00000022387	POLR3A	100	89.224	Cavia_porcellus
ENSTNIG00000013151	polr3a	100	88.147	ENSCCAG00000032995	POLR3A	96	93.038	Cebus_capucinus
ENSTNIG00000013151	polr3a	100	89.655	ENSCATG00000035842	POLR3A	98	93.038	Cercocebus_atys
ENSTNIG00000013151	polr3a	100	89.440	ENSCLAG00000009629	POLR3A	100	89.440	Chinchilla_lanigera
ENSTNIG00000013151	polr3a	100	89.727	ENSCSAG00000009292	POLR3A	100	89.727	Chlorocebus_sabaeus
ENSTNIG00000013151	polr3a	85	75.295	ENSCHOG00000008368	POLR3A	100	75.295	Choloepus_hoffmanni
ENSTNIG00000013151	polr3a	99	90.216	ENSCPBG00000002079	POLR3A	99	90.216	Chrysemys_picta_bellii
ENSTNIG00000013151	polr3a	100	68.485	ENSCSAVG00000009925	-	100	68.485	Ciona_savignyi
ENSTNIG00000013151	polr3a	86	86.044	ENSCANG00000041071	POLR3A	98	93.671	Colobus_angolensis_palliatus
ENSTNIG00000013151	polr3a	78	91.026	ENSCGRG00001015599	-	92	91.026	Cricetulus_griseus_chok1gshd
ENSTNIG00000013151	polr3a	88	88.098	ENSCGRG00000001019	Polr3a	100	88.098	Cricetulus_griseus_crigri
ENSTNIG00000013151	polr3a	100	94.971	ENSCSEG00000016653	polr3a	100	94.971	Cynoglossus_semilaevis
ENSTNIG00000013151	polr3a	100	94.397	ENSCVAG00000023049	polr3a	100	94.397	Cyprinodon_variegatus
ENSTNIG00000013151	polr3a	99	91.079	ENSDARG00000102569	polr3a	99	91.079	Danio_rerio
ENSTNIG00000013151	polr3a	100	88.937	ENSDNOG00000010194	POLR3A	100	88.937	Dasypus_novemcinctus
ENSTNIG00000013151	polr3a	100	89.440	ENSDORG00000000184	Polr3a	100	89.440	Dipodomys_ordii
ENSTNIG00000013151	polr3a	99	56.358	FBgn0030687	CG17209	99	56.358	Drosophila_melanogaster
ENSTNIG00000013151	polr3a	87	90.688	ENSETEG00000007477	POLR3A	89	90.688	Echinops_telfairi
ENSTNIG00000013151	polr3a	59	75.467	ENSEBUG00000013761	polr3a	98	75.467	Eptatretus_burgeri
ENSTNIG00000013151	polr3a	100	89.583	ENSEASG00005023053	POLR3A	100	89.583	Equus_asinus_asinus
ENSTNIG00000013151	polr3a	97	89.658	ENSECAG00000019416	POLR3A	100	89.580	Equus_caballus
ENSTNIG00000013151	polr3a	96	85.182	ENSEEUG00000001774	POLR3A	100	85.182	Erinaceus_europaeus
ENSTNIG00000013151	polr3a	100	90.108	ENSELUG00000014016	polr3a	100	90.108	Esox_lucius
ENSTNIG00000013151	polr3a	100	89.943	ENSFCAG00000000843	POLR3A	100	89.943	Felis_catus
ENSTNIG00000013151	polr3a	100	89.591	ENSFALG00000006913	POLR3A	100	89.591	Ficedula_albicollis
ENSTNIG00000013151	polr3a	100	89.727	ENSFDAG00000007813	POLR3A	100	89.727	Fukomys_damarensis
ENSTNIG00000013151	polr3a	95	95.132	ENSFHEG00000011922	polr3a	99	95.132	Fundulus_heteroclitus
ENSTNIG00000013151	polr3a	100	87.491	ENSGMOG00000000291	polr3a	99	87.491	Gadus_morhua
ENSTNIG00000013151	polr3a	100	90.014	ENSGALG00000004947	POLR3A	100	90.014	Gallus_gallus
ENSTNIG00000013151	polr3a	100	94.397	ENSGAFG00000005112	polr3a	100	94.397	Gambusia_affinis
ENSTNIG00000013151	polr3a	100	94.253	ENSGACG00000002304	polr3a	100	94.253	Gasterosteus_aculeatus
ENSTNIG00000013151	polr3a	95	90.023	ENSGAGG00000010386	POLR3A	98	90.023	Gopherus_agassizii
ENSTNIG00000013151	polr3a	99	88.745	ENSGGOG00000027729	POLR3A	100	91.149	Gorilla_gorilla
ENSTNIG00000013151	polr3a	100	95.259	ENSHBUG00000018098	polr3a	100	95.259	Haplochromis_burtoni
ENSTNIG00000013151	polr3a	100	89.583	ENSHGLG00000017899	POLR3A	100	89.583	Heterocephalus_glaber_female
ENSTNIG00000013151	polr3a	100	89.583	ENSHGLG00100008483	POLR3A	100	89.583	Heterocephalus_glaber_male
ENSTNIG00000013151	polr3a	100	93.678	ENSHCOG00000001075	polr3a	100	93.678	Hippocampus_comes
ENSTNIG00000013151	polr3a	100	89.655	ENSSTOG00000012983	POLR3A	100	89.655	Ictidomys_tridecemlineatus
ENSTNIG00000013151	polr3a	100	94.253	ENSKMAG00000015290	polr3a	100	94.253	Kryptolebias_marmoratus
ENSTNIG00000013151	polr3a	99	94.173	ENSLBEG00000017214	polr3a	99	94.173	Labrus_bergylta
ENSTNIG00000013151	polr3a	97	87.602	ENSLACG00000018557	POLR3A	99	87.602	Latimeria_chalumnae
ENSTNIG00000013151	polr3a	100	92.186	ENSLOCG00000004942	polr3a	100	92.186	Lepisosteus_oculatus
ENSTNIG00000013151	polr3a	100	88.370	ENSLAFG00000016719	POLR3A	100	88.370	Loxodonta_africana
ENSTNIG00000013151	polr3a	100	89.655	ENSMFAG00000032218	POLR3A	100	89.655	Macaca_fascicularis
ENSTNIG00000013151	polr3a	100	89.655	ENSMMUG00000005514	POLR3A	98	93.038	Macaca_mulatta
ENSTNIG00000013151	polr3a	99	83.286	ENSMNEG00000035163	POLR3A	99	89.076	Macaca_nemestrina
ENSTNIG00000013151	polr3a	100	85.848	ENSMLEG00000030014	POLR3A	98	93.038	Mandrillus_leucophaeus
ENSTNIG00000013151	polr3a	100	95.330	ENSMAMG00000017497	polr3a	100	95.330	Mastacembelus_armatus
ENSTNIG00000013151	polr3a	100	95.259	ENSMZEG00005000576	polr3a	100	95.259	Maylandia_zebra
ENSTNIG00000013151	polr3a	100	72.979	ENSMGAG00000005713	-	100	72.979	Meleagris_gallopavo
ENSTNIG00000013151	polr3a	100	87.213	ENSMAUG00000016247	Polr3a	100	87.213	Mesocricetus_auratus
ENSTNIG00000013151	polr3a	100	89.727	ENSMICG00000005937	POLR3A	100	91.225	Microcebus_murinus
ENSTNIG00000013151	polr3a	100	89.368	ENSMOCG00000012185	Polr3a	100	89.368	Microtus_ochrogaster
ENSTNIG00000013151	polr3a	100	95.402	ENSMMOG00000013822	polr3a	100	95.402	Mola_mola
ENSTNIG00000013151	polr3a	100	88.937	ENSMODG00000001036	POLR3A	100	88.937	Monodelphis_domestica
ENSTNIG00000013151	polr3a	100	94.756	ENSMALG00000001249	polr3a	100	94.756	Monopterus_albus
ENSTNIG00000013151	polr3a	100	89.368	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.368	Mus_caroli
ENSTNIG00000013151	polr3a	100	89.440	ENSMUSG00000025280	Polr3a	100	89.440	Mus_musculus
ENSTNIG00000013151	polr3a	100	89.368	MGP_PahariEiJ_G0030029	Polr3a	100	89.368	Mus_pahari
ENSTNIG00000013151	polr3a	100	86.782	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSTNIG00000013151	polr3a	100	89.174	ENSMPUG00000003790	POLR3A	100	89.174	Mustela_putorius_furo
ENSTNIG00000013151	polr3a	100	88.578	ENSMLUG00000011522	POLR3A	100	88.578	Myotis_lucifugus
ENSTNIG00000013151	polr3a	100	88.290	ENSNGAG00000015863	Polr3a	100	88.290	Nannospalax_galili
ENSTNIG00000013151	polr3a	100	92.960	ENSNBRG00000014262	polr3a	100	92.960	Neolamprologus_brichardi
ENSTNIG00000013151	polr3a	87	83.635	ENSNLEG00000010501	POLR3A	92	83.635	Nomascus_leucogenys
ENSTNIG00000013151	polr3a	99	76.761	ENSMEUG00000012446	POLR3A	100	76.761	Notamacropus_eugenii
ENSTNIG00000013151	polr3a	100	85.057	ENSOPRG00000001880	-	100	85.057	Ochotona_princeps
ENSTNIG00000013151	polr3a	100	89.009	ENSODEG00000015146	POLR3A	100	89.009	Octodon_degus
ENSTNIG00000013151	polr3a	100	95.474	ENSONIG00000016129	polr3a	100	95.474	Oreochromis_niloticus
ENSTNIG00000013151	polr3a	98	88.913	ENSOANG00000007013	POLR3A	100	88.913	Ornithorhynchus_anatinus
ENSTNIG00000013151	polr3a	100	89.296	ENSOCUG00000012450	POLR3A	100	89.296	Oryctolagus_cuniculus
ENSTNIG00000013151	polr3a	100	94.971	ENSORLG00000008958	polr3a	100	94.971	Oryzias_latipes
ENSTNIG00000013151	polr3a	100	92.744	ENSORLG00020007525	polr3a	98	95.387	Oryzias_latipes_hni
ENSTNIG00000013151	polr3a	100	94.971	ENSORLG00015006633	polr3a	100	94.971	Oryzias_latipes_hsok
ENSTNIG00000013151	polr3a	100	94.540	ENSOMEG00000012865	polr3a	100	94.540	Oryzias_melastigma
ENSTNIG00000013151	polr3a	100	89.440	ENSOGAG00000010995	POLR3A	100	89.440	Otolemur_garnettii
ENSTNIG00000013151	polr3a	100	89.383	ENSOARG00000009656	POLR3A	100	89.383	Ovis_aries
ENSTNIG00000013151	polr3a	100	89.943	ENSPPRG00000002128	POLR3A	100	89.943	Panthera_pardus
ENSTNIG00000013151	polr3a	100	89.943	ENSPTIG00000020916	POLR3A	100	89.943	Panthera_tigris_altaica
ENSTNIG00000013151	polr3a	100	89.799	ENSPTRG00000002664	POLR3A	98	93.038	Pan_troglodytes
ENSTNIG00000013151	polr3a	100	89.655	ENSPANG00000022508	POLR3A	98	93.038	Papio_anubis
ENSTNIG00000013151	polr3a	100	91.667	ENSPKIG00000008140	polr3a	100	92.443	Paramormyrops_kingsleyae
ENSTNIG00000013151	polr3a	98	90.080	ENSPSIG00000002092	POLR3A	100	90.080	Pelodiscus_sinensis
ENSTNIG00000013151	polr3a	100	89.152	ENSPEMG00000006768	Polr3a	100	89.152	Peromyscus_maniculatus_bairdii
ENSTNIG00000013151	polr3a	100	89.080	ENSPCIG00000015842	POLR3A	100	89.080	Phascolarctos_cinereus
ENSTNIG00000013151	polr3a	53	95.973	ENSPFOG00000006458	polr3a	100	95.973	Poecilia_formosa
ENSTNIG00000013151	polr3a	100	94.612	ENSPLAG00000000997	polr3a	100	94.612	Poecilia_latipinna
ENSTNIG00000013151	polr3a	100	94.540	ENSPMEG00000006821	polr3a	100	94.540	Poecilia_mexicana
ENSTNIG00000013151	polr3a	100	94.540	ENSPREG00000002385	polr3a	100	94.540	Poecilia_reticulata
ENSTNIG00000013151	polr3a	93	89.714	ENSPPYG00000002305	POLR3A	99	89.714	Pongo_abelii
ENSTNIG00000013151	polr3a	84	76.806	ENSPCAG00000005690	POLR3A	87	76.806	Procavia_capensis
ENSTNIG00000013151	polr3a	100	89.583	ENSPCOG00000028311	POLR3A	100	89.583	Propithecus_coquereli
ENSTNIG00000013151	polr3a	100	88.290	ENSPVAG00000015553	POLR3A	100	88.290	Pteropus_vampyrus
ENSTNIG00000013151	polr3a	100	95.330	ENSPNYG00000020987	polr3a	100	95.330	Pundamilia_nyererei
ENSTNIG00000013151	polr3a	99	87.698	ENSPNAG00000006629	polr3a	99	87.698	Pygocentrus_nattereri
ENSTNIG00000013151	polr3a	100	89.296	ENSRNOG00000010008	Polr3a	100	89.296	Rattus_norvegicus
ENSTNIG00000013151	polr3a	100	85.848	ENSRBIG00000034967	POLR3A	98	93.038	Rhinopithecus_bieti
ENSTNIG00000013151	polr3a	100	89.655	ENSRROG00000025527	POLR3A	98	93.038	Rhinopithecus_roxellana
ENSTNIG00000013151	polr3a	98	49.793	YOR116C	RPO31	99	49.793	Saccharomyces_cerevisiae
ENSTNIG00000013151	polr3a	100	89.655	ENSSBOG00000022199	POLR3A	100	89.655	Saimiri_boliviensis_boliviensis
ENSTNIG00000013151	polr3a	100	89.152	ENSSHAG00000007588	POLR3A	94	89.152	Sarcophilus_harrisii
ENSTNIG00000013151	polr3a	100	92.457	ENSSFOG00015014357	polr3a	100	92.457	Scleropages_formosus
ENSTNIG00000013151	polr3a	100	95.043	ENSSMAG00000001780	polr3a	100	95.043	Scophthalmus_maximus
ENSTNIG00000013151	polr3a	100	95.977	ENSSDUG00000019840	polr3a	100	95.977	Seriola_dumerili
ENSTNIG00000013151	polr3a	100	96.121	ENSSLDG00000023908	polr3a	100	96.121	Seriola_lalandi_dorsalis
ENSTNIG00000013151	polr3a	69	88.715	ENSSARG00000009916	POLR3A	89	88.715	Sorex_araneus
ENSTNIG00000013151	polr3a	100	87.716	ENSSPUG00000013209	POLR3A	100	87.716	Sphenodon_punctatus
ENSTNIG00000013151	polr3a	100	95.474	ENSSPAG00000017712	polr3a	100	95.474	Stegastes_partitus
ENSTNIG00000013151	polr3a	100	89.511	ENSSSCG00000010327	POLR3A	100	89.511	Sus_scrofa
ENSTNIG00000013151	polr3a	100	89.583	ENSTGUG00000006423	-	100	89.583	Taeniopygia_guttata
ENSTNIG00000013151	polr3a	100	96.911	ENSTRUG00000013488	polr3a	100	96.911	Takifugu_rubripes
ENSTNIG00000013151	polr3a	71	91.489	ENSTBEG00000015288	POLR3A	75	91.489	Tupaia_belangeri
ENSTNIG00000013151	polr3a	100	83.621	ENSTTRG00000007817	POLR3A	100	83.621	Tursiops_truncatus
ENSTNIG00000013151	polr3a	100	87.644	ENSUAMG00000011283	POLR3A	100	87.644	Ursus_americanus
ENSTNIG00000013151	polr3a	100	89.943	ENSUMAG00000013913	POLR3A	100	89.943	Ursus_maritimus
ENSTNIG00000013151	polr3a	99	81.627	ENSVPAG00000003285	POLR3A	100	81.627	Vicugna_pacos
ENSTNIG00000013151	polr3a	100	89.871	ENSVVUG00000025523	POLR3A	100	89.871	Vulpes_vulpes
ENSTNIG00000013151	polr3a	86	89.491	ENSXETG00000018101	polr3a	100	89.491	Xenopus_tropicalis
ENSTNIG00000013151	polr3a	100	94.684	ENSXMAG00000015213	polr3a	100	94.684	Xiphophorus_maculatus